Salmo trutta (river trout): 115192402
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Entry
115192402 CDS
T08542
Name
(RefSeq) F-box/LRR-repeat protein 5-like
KO
K10271
F-box and leucine-rich repeat protein 5
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115192402
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
115192402
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
LRR_4
Hemerythrin
F-box
LRR_6
LRR_At1g61320_AtMIF1
DUF7885
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
115192402
NCBI-ProteinID:
XP_029606734
Ensembl:
ENSSTUG00000012139
UniProt:
A0A673Y0K4
LinkDB
All DBs
Position
4:43492885..43506657
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AA seq
691 aa
AA seq
DB search
MAPFPDEVDVFTGPHWRMKQLVGLYCEKLSQTNFSNNNDFRSFLQSLCATFKEFKMHEQI
ENEYIIGLLQQRSCTVYNVHSDNKLSEMLSLFEKGLRSVKSEYEQLNYARQLKERLEAFT
QDFLPHMKEEEEVFQPMLMQYFTYEELKDLKKQVMAQHCSQQRWDCAAEVLKGLSLWSQA
EELHKAFKYADHEKTDELEKELCSTHISQLPTEILLHLFAYLGPEDLCHCGQVSSAWSDL
AKTGSLWRHLYPVRWARGDHYRGPPADLNQEPDEEWVNSLQDEGKAYQEWDEDADVDESD
ETCEDSLAISSAQREKKLLNEMIQNLLPAVGSSVRSIVLAYSSTVSSKMVRQILSLCPNL
THLDLTQTDVTDSAFDSWSSLGSCLSLEHLDLSGCEKITDHTLKKLSIGLGYLASLTCSQ
KRSDRQAKLLKSPPPISLLDERSLRLTGASRQALIFKQHMGRRCSSPSRVWVLDPSELAD
IEDAAEWNRRGGVSTPEGQGFVATKPGGSCCCRRSRKRGLRTSYSTSYWQQQYGLGEACC
GHSTCCTGEMALRTYGGLQCLSYTTRGSAGAEFWTKCSSGGQRCLELYNRTDQSDARRSL
RFLSLSGCYRVTDLGLRALSQRGGLPLLEHLNLSGCLLITEVGLQELVSACPALNDEHFY
YCDNINGPHADTASGCQNLQCGFRACCRSGE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcaccttttcccgacgaggtggatgtttttactggcccacattggcgaatgaaacag
ttggtaggactttactgcgagaagctgtcacagaccaacttctccaacaacaatgacttc
cgctcatttcttcagtcactgtgtgccaccttcaaggagttcaagatgcacgaacagatt
gaaaacgagtatatcatcggcctgttgcaacagcgcagctgcactgtgtataatgtgcac
tccgataacaagctgtcagagatgttgtccctgtttgagaaagggctgagaagtgttaag
agcgagtatgagcagctgaactatgcccggcaactgaaagagcgactggaggcattcaca
caggacttcttaccccacatgaaggaggaggaagaggtgttccagcccatgctgatgcag
tacttcacctatgaggagctgaaagacctcaagaagcaggtgatggcacagcactgtagc
cagcagcgatgggactgtgcagcagaagtgctgaaggggctcagtctgtggagccaggca
gaggagctgcacaaggccttcaagtatgctgaccacgagaagactgacgaactagagaaa
gagctgtgctccacccacatctcccagctacctacagagatcctgctgcatctgttcgcc
tacctgggtcctgaggacctgtgtcactgtggccaggtgtcctcagcctggtccgacctg
gccaagaccggctctctgtggaggcacctctaccctgtacgctgggccagaggggatcac
tatcgcggccccccagctgatctgaatcaggaaccggatgaggagtgggtgaacagtctg
caggatgagggcaaggcctaccaggagtgggatgaggatgcagatgtggatgagtctgat
gagacttgtgaagactcattggctataagctcagctcagagggagaagaaattactaaat
gaaatgatccagaaccttctgccagctgtgggttcctctgtcaggtccatcgttctggcc
tacagctctacggtctccagtaagatggtgcgtcagatccttagtctctgtcctaatctc
acccacctggacctcactcagactgatgtcacagactccgcctttgacagttggtcatct
ctggggtcatgtctgtctcttgagcacctggacctatcaggctgtgagaagatcactgac
cacaccctgaagaagctgtccattggtctggggtacctggcatcgctcacctgctctcag
aaacgatccgaccggcaagccaagcttctgaagagcccacctcccatcagtctgctggac
gagcggagcctccgtttgacgggggccagccggcaggccctgatcttcaagcagcatatg
gggagacggtgcagcagcccctccagggtctgggtcctggacccttcggagctggctgac
atcgaggatgcagcagagtggaaccgccgcgggggagtgtctacccctgaggggcaaggc
tttgtggcgacgaagccaggaggttcgtgttgctgcaggaggagtaggaagcggggcctc
aggacaagctatagcacctcctactggcagcagcagtatgggcttggggaggcctgctgt
ggccattcaacctgctgcactggtgagatggccctgaggacttatggagggctgcagtgt
ttgtcttacaccaccaggggcagtgcaggggcagagttttggactaaatgctcctctggg
ggccagcggtgcctggagctttacaacagaactgatcagtcagacgctcggcgctcgctg
agattcctcagcctctctggatgctatcgggttacagacctgggcttgagggcgctgtct
cagcgtggaggtcttcctctcctggagcatctgaacctgtctggatgtctcctcatcact
gaggtggggctacaggagctggtgtcagcctgtcctgccctcaatgatgaacacttctac
tactgcgacaacatcaatggtccccatgctgatacggccagcggctgccagaacctgcag
tgtggcttcagggcgtgctgccgctctggagagtga
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