Salmo trutta (river trout): 115192481
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Entry
115192481 CDS
T08542
Name
(RefSeq) paired amphipathic helix protein Sin3b-like isoform X1
KO
K23213
paired amphipathic helix protein Sin3b
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115192481
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
115192481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
MCP_V20_C
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
115192481
NCBI-ProteinID:
XP_029606903
Ensembl:
ENSSTUG00000007091
UniProt:
A0A673WU67
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All DBs
Position
4:47658236..47668158
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AA seq
1222 aa
AA seq
DB search
MSVTISGIMAKIQAHSNTKQINQIQDKAYVVQKQVQQQHFQKLKVEDALSYLDQVKIRFG
NDPGIYNKFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEIPKNG
VVFLQSPFSAQVSPGQGKSMASPAVSATGSSVAEVGSAQSEAVASPESIYSSSGPPEPPS
RLSLPLPSRESPSQPQSSSVSPPASEPSPVEFDSAISYVNKIKNRFLDHPEIYRSFLEIL
HTYQVHCVINMKEQLEVKESRGHGSSGMTEDEVFSKVASLFKGQEDLLAEFGQFLPDAKR
SLFTGSPLTGKDHLKRAEDEDMSKQSKKRPRPMLLPHMTPLLKKKMKFSCSKDQSFASVG
KHGVLREFTFFDKLRRFFKSREVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYT
QFKSFLGDKELSHSVSGLSDRYMEGGGGREVDYASCKRLGSSYRALPKTYQQPKCSGRTA
ICKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLES
VQKKLSRLSPEDQDRFRLDDCLGGTSEVIQRRAIYRIYGDKAPEIIEGLKRSPATAVPVV
LKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQGVNFKQNDMKALRSKSLLNEIES
VYDERQEQSTEEGGVVQQGRDGSSAPAVSDPHMVFTYEDKQILEDAASLIIYHVKRQPTI
HKDDKDHIKRIIQHFVPDLFFSRRGELSETEEWTDEEVEERGDRGGGCGGIPGAVATSGS
QQQPQHQQLNGESRRRRCTSPQTAELGVASSHSLAPEGGEKVDLRDPEAEHQKELDGVYN
LFFVNNNWYFFLRLHQTLCQRLLRVYRQAERQLLEHRAEQNRERLLMAEGRDLAMELRLK
QPSEVELEEYYPAFLDMVRSLLDGNLESTQYEDTLREMFTIHAYIGFTIDKLIQNLIRQL
QHLVSDEVCLQVAELYLAERKRGAAGANLSSQCVRTAWETSYQWKSERVMAEENCFKVMF
IQNQGQVTLTIELLDTEEAQADDPLDVQCLSSYMEQFVGTGSTLCSQNEGYFFKPVFLPR
NLRHFRRWQVRQVEAMRCRREWHRQLGVESAGSLDCRFKLNTHKMVFVMNSEDYMYRRGA
LVKARKSQHRVAVNQHERFDKWHQGWLVEHVTPAAERSVHDWLIGEEEEDMIPCKTTCLN
TQVKGLPVNRYQVHYSRKPPSP
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttactatctccgggatcatggcgaaaattcaggcacacagcaacacgaagcaa
ataaaccaaattcaagacaaggcctatgttgtacaaaagcaagtgcaacaacagcacttt
caaaaactgaaggttgaagatgccctatcatacctggaccaagtgaaaatacgatttggg
aatgaccctggaatatacaacaaatttcttgacataatgaaagaattcaaatcacaaagc
attgacacaccgggtgttataaatcgtgtgtctcagctcttccacgggcacccggacctc
gtcttaggattcaatgccttcctgcccccagggtatcggatagagattcccaagaatggt
gtagttttccttcagtccccattctctgcccaggtgtccccaggtcaggggaagagtatg
gcaagccctgctgtgagtgccacaggctcatctgttgctgaagttggatctgcccaaagt
gaagctgtggcatcacctgaaagcatctactcatcctcagggcccccagagcctccaagt
agactgtccttgccactccccagcagagagagcccatcccaaccacagtcctcctcagtg
tccccccctgcctcagagcccagcccagtagaatttgacagtgctatcagctatgtcaac
aaaatcaaaaaccgcttcctagaccatccagagatctacagatccttccttgagatacta
cacacttaccaggtacactgtgtcatcaatatgaaggagcagcttgaggtcaaggagagc
cggggtcatggtagtagtggaatgacagaggatgaagttttctcaaaagtggccagcctc
ttcaaaggccaagaggacttactggctgagtttggacagttcttaccagatgctaagaga
tcactgttcactggcagccccctgactgggaaagaccatctgaagagggcagaggacgag
gacatgagcaaacagagcaagaagagacccaggcccatgctgctgcctcacatgacacca
ctgctcaagaaaaagatgaagttttcatgctccaaagaccagtcctttgcctcagttggg
aagcatggagtcttgcgggagttcacattttttgacaagcttcgccgtttcttcaagagt
cgggaggtatacgagaacttcctccgctgtattgctttgtttaaccaggaagtggtttcg
ggagcagagctgctgcagcttgtcactccctttctggggaagtttccagagctatatacc
cagttcaagtcttttctgggggacaaagagctctctcattcagtgtctggcctgtcagac
cgatacatggaaggaggtgggggcagggaggttgactatgcctcttgcaagcgcctggga
tccagctacagagcactacccaagacttaccagcagcccaagtgcagcggtcgcactgct
atctgcaaagaggtgctgaatgacacctgggtttctttcccctcatggtcggaggactct
acgtttgtgagctcaaagaaaaccccatacgaggagcagcttcatcgctgtgaggacgaa
aggtttgagttggatgtggtcctggagactaacctggccaccatccgggtcctggagagc
gttcagaagaagctgtcccgtctgtcgcctgaggaccaggaccgcttccgtctggacgat
tgtctgggaggcacatctgaggtcatccagcgccgagccatctaccgtatctacggcgac
aaggcccctgagattatagaggggctgaagaggagccctgctactgccgtgcctgtggtg
ctcaagagattgaaagcgaaggaggaggagtggagagaagcccagcagggcttcaacaag
atctggagggagcagtatgagaaggcctacctcaagtccctggaccaccagggggtcaac
ttcaagcagaatgacatgaaggccctccgatccaagagcctgctcaatgagattgaaagt
gtttatgatgagcgtcaggagcagagcacagaggaggggggcgtggtccagcaggggcgt
gacgggagcagcgcgccagcggtcagcgatccccacatggtgttcacctacgaggacaag
cagatcctggaggacgccgcctctctcatcatctaccatgtcaaacgccagcccaccatc
cacaaggacgacaaggaccacatcaagcgcatcatacagcactttgtccccgacctcttc
ttctcccgccgcggcgagctcagcgagacggaggagtggacggacgaggaggtggaggag
agaggagaccggggaggaggatgtggcggtataccaggagccgtagcaacatcaggcagt
cagcaacaacctcagcatcagcagctgaacggggagtcgaggcggcggcgctgcacctct
cctcagacagcggagcttggtgtcgcctcgtcccatagcctggctccagagggaggggag
aaggtggacctgagagaccctgaggcagagcaccagaaggagctggacggagtctacaac
ctgttcttcgtcaacaacaactggtacttcttcctgcggctgcaccagaccctgtgccag
cggctgctgagggtgtaccggcaggcggagaggcaactgctggagcaccgtgcagagcag
aaccgtgagaggcttctgatggccgagggccgcgacctggccatggagctccgcctcaaa
cagcccagtgaggtagaactggaggagtactacccagcgttcctggatatggtgcgcagt
cttctggatgggaacctggagtccacacagtacgaggacacattgcgggagatgttcacc
atccacgcctacattggcttcaccatcgacaagctcatccagaacctcattagacagctg
cagcacctggtgagtgatgaggtgtgtctgcaggtggctgagctgtacctggccgagagg
aagaggggcgcggcgggggctaacctgtcgtcccagtgtgtgagaacggcctgggagacc
agctaccagtggaagtcggagagggtcatggctgaggagaactgctttaaggtaatgttc
attcagaaccaaggccaggtgaccttgaccattgagctgctggacacagaggaggcccag
gctgatgatccattggatgtacagtgcctgtccagctatatggaacagtttgtagggaca
gggtcaacgctttgctcgcagaacgaaggctactttttcaaaccggtatttttgcccagg
aacctgaggcacttcagacgctggcaggtgcggcaggtggaggcgatgcgctgcagacgg
gagtggcacaggcagctgggagtggagagtgctggcagcctggactgccgctttaaactc
aacacccacaagatggtgttcgtcatgaactctgaggactacatgtaccgccggggagcg
ctggttaaagccaggaagtcccagcacagggttgctgtgaaccagcacgagcgctttgac
aagtggcaccagggctggctggtggagcacgtgaccccggcggccgagcgctccgtccac
gactggctgataggcgaggaggaggaggacatgattccgtgcaagaccacctgcctcaac
acacaggtcaaagggctgcctgtcaacagataccaggtgcattacagtaggaaaccccct
tctccgtag
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