Salmo trutta (river trout): 115192489
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Entry
115192489 CDS
T08542
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E-like isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115192489
04020 Calcium signaling pathway
115192489
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115192489
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115192489
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
115192489
NCBI-ProteinID:
XP_029606917
Ensembl:
ENSSTUG00000007576
LinkDB
All DBs
Position
4:47972853..48073305
Genome browser
AA seq
2328 aa
AA seq
DB search
MSRFGDNVPALLGSGEGGSERNRTRDGAPVSTGGGVSPAFKQTKAQRARTMALYNPIPVR
QNCFTVNRSLFIFGEDNIVRKYAKKVIEWPPFEYMILATIIANCIVLALEQHLPGEDKTP
MSKRLEKTEPYFIGMFCFEAGIKVVALGFVFHKGSYLRNGWNVMDFIVVLSGILATAGAH
MNIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIG
LEFYSGKLHNTCLPMPNILENETVDKSESEFPCGVRKCPDKYTCHDTWIGPNDGITQFDN
ILFAVLTVFQCITMEGWTTVLYNTNDALGPTWNCMYFIPLIIIGSFFVLNLVLGVLSGEF
AKERERVENRRAFMKLRRQQQIERELNGYRAWINKAEEVMLAEDNKNSGRSALDVLKRAT
LKRRGLDQQYSDISSVGIPMTRASIRSAKRGPKAYLKRKERLLRISIRRMVKTHIFYWTV
LGLVALNTFCVAIVHHNQPHWLSVFLYYAEFLFLGLFLTEMCLKMYSLGPRLYFHSAFNR
FDCWVIVGSIFEVMWGFFRPGMSFGISVLRALRLLRIFKITKYWASLRNLVVSLMNSMKS
IISLIFLLFLFILVFALLGMQLFGGRFIFEDYTPTNFDTFPAAIMTVFQILTGEDWNEVM
YNGIRSQGGVKSGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEDEEAAF
NQKHALQKAKEVGAISSLMSSDRRRRPYLYRKRAIHRSRPAYSLKEVESLAVGPPCPPLN
SSNSFMSRRERSRRLTMSVWEQRTSQLRRHRHMSSREILFSNPNEEQEGPPGCPHHLKAT
GTPTGSLKLPDPTADPKAFTAKPPKPMEMPLEEPALSMGVPELHLSNPLAEPPDPTDTPL
PDPPTSTAVFIPEPTESEPCPEGKRGIPNHCHQGLNGRRSPWLNGERRQRAVRKFRPPAS
DTLSIDMEGMWLRRPQGTGHCEAQAGARGLDSPQGSEGSSRSVSMERKTPEDPVEEVRKD
GNEGETSQPSETREAEHRQRDHDQTGGPELQNREEGLQSGPPTLQPSQAAVLALPEGPTG
DSETDSNATTLNQSPLSSSIVIEVTDVQSSLELTPITGNSKDVEASKPEKDEEEVASPVN
TVTPDSMFIFKPDNPIRRACHYVVNLRYFEMCILLVIAASSIALAAEDPVSATSDWNKVL
RYFDYVFTGVFTFEMIIKMIDQGLILHDGSYFRDLWNILDFIVVVGALVAFALTNVLGNN
KGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVI
AVQLFKGKFFYCTDGSKDTEKDCQGFYINYEKDKQEVKRREWRRHDFHYDNIVWALLTLF
TVSTGEGWPQVLQHSVDVTEEDRGPSQGNRMEMSIFYVIYFVVFPFFFVNIFVALIIITF
QEQGDKMMEECSLEKNERACIDFAISAKPLTRYMPQNRQTFQYRLWHFVVSPSFEYTVLA
MIALNTIVLMMKYYSAPPVYEAVLKHLNTAFTVLFSVECVLKIMAFGFLNYFRDTWNIFD
FITVLGSITEIVVDLQSIETFNMGFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPY
VCLLIAMLFFIYAIIGMQVFGNIRLDEETHINQHNNFKTFFGALMLLFRSATGESWQEIM
LSCLGGQKCEPDPLALTSDHEEHCGTEFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLT
RDSSILGPHHLDEFVRIWGEYDRAACGRIHYTDMYEMLTDMSPPLGLGKKCPSKVAYKRL
VLMNMPVDEEMSVHFTSTLMALIRTALEVKIARGGEDRGQMDSDLQKEISIIWPHLSQKT
LDLLVPIHKANHMTIGKIYAAMMIMDYYKQNKAKKLRQQLEEQKHAPMFQRMDASTLPQD
ILCSAKALPFLTHSAGSALTRGGFVALRPISPQEMFMQPMSQDLEDKEEDYHHYHHYHHH
RLHTLVPERKEFNRILCPTNRQDATLKVPGWAVSIRASSMPQLAVDTQVGTDSSTLMKRS
FSTIGDQCVNGLWQEEYSLERVSSDRLNRPRQRNIRGIRSNLREPVDHERGRSKERRHLL
SPDVSRCNSEERGQDPSQERKQSRSPSEGRAHVHHRQGNTSGSPGPSNSESSTPCGRRQL
PQTPLRPRPHISYSPLICRAHPSPPAVSEGRARTQEAPGETEEPLWREEGERPAQVAGAG
LGVGVVVGVSDPGLGVSHPHPSPHRYISEPYLPLHEEFHSPDSSGLEETLTFEVAIATSL
GRSNTISSAPQLRHNWQVPNGHFHKRLGQASSVATCELLCDTDEDDRC
NT seq
6987 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggttcggagacaacgttcccgccttgttgggctccggggaagggggctccgag
cgcaacaggacccgggatggagcgcctgtgtctacaggtggtggagtttccccagccttt
aaacagaccaaagcgcagagagctcgcaccatggccctgtacaaccccatccctgtccga
cagaactgtttcaccgtcaatagatcactcttcattttcggggaggacaacattgttcgg
aagtacgcaaagaaggtcatagagtggcctccgtttgagtacatgatcctcgccaccatc
atcgccaactgtatcgtcctggccctggagcagcacctgcctggagaggacaagaccccc
atgtctaagagactggaaaagacagagccttacttcattgggatgttctgctttgaagct
gggattaaagtggtggcattgggatttgtattccataaaggctcctacctgagaaatggc
tggaacgtcatggatttcattgtggttctgagtgggattctggccacagcgggagctcac
atgaacatcccagtggacctgcggaccctgagagccgtccgtgtgctcagacccctcaaa
ctggtctctggaatccccagcctgcagatagtcctgaaatccatcatgaaagccatggtg
ccgctgctccagattggcctgttgctcttcttcgccattctcatgtttgccatcatcggc
ctggagttctacagcgggaagctccacaacacctgtctgcccatgcccaatatcctagag
aatgagacggtggacaagtctgagtcagagttcccgtgtggggtaaggaagtgccctgac
aagtacacctgccatgacacctggatcggccccaacgacggcatcacccagtttgacaac
atcctgtttgctgtgctcactgtcttccagtgcatcaccatggagggctggaccaccgtg
ctctacaataccaacgatgctttaggccccacgtggaactgcatgtacttcatccctctg
ataatcattggctccttcttcgtgttgaacctggtattgggagtgctctcaggagagttt
gctaaagagagggagcgggttgagaaccgcagggcgttcatgaagctgcggaggcagcag
cagattgagagggaactcaatggctaccgggcctggatcaacaaagcagaggaggtgatg
cttgcagaggataataagaattcaggacggtctgctcttgatgtgctgaagagggccaca
ctcaagaggagaggactggaccagcagtatagtgacatctcttctgtgggcatcccgatg
accagagccagcatcaggagtgctaagagaggacccaaggcttatttgaagcgtaaggag
cgtctgctgcggatctctatccgccgcatggtgaagacacacatcttctactggactgta
ctgggcctggtggccctcaacacattctgtgttgccatcgtccatcacaaccaaccccac
tggctgtctgtgttcctctactatgcagagttcctctttctgggtctgtttctcactgaa
atgtgtttaaagatgtacagcctgggacccagactctacttccactccgccttcaaccgc
ttcgactgctgggtgatagtgggaagcatctttgaggtgatgtggggatttttcaggcct
ggcatgtcctttggcatcagtgtgctgcgtgcgctccgtctgctgaggatattcaagatc
accaagtactgggcgtcgctgaggaacctggtggtatccctgatgaattctatgaaatca
atcatcagcctcattttcctcctcttcctcttcatcctggtctttgctttgctgggcatg
cagctctttggtgggaggttcatctttgaagactacactcctacaaactttgatactttt
cctgcagccatcatgactgtatttcagatcctgacaggagaagactggaatgaggtgatg
tacaatgggatccgctcccagggaggagtgaagtcaggaatgtggtcctccatatacttc
attgtactcacactctttggtaactacacgctgttgaatgttttcttggccatcgctgtg
gacaatctggccaatgcccaggaacttaccaaggatgaagaggatgaagaggctgctttc
aatcagaaacatgctctccagaaagcaaaggaagtaggggccatttcttccctgatgtca
tcagacaggaggaggagaccctacctgtataggaaaagagcgatacacaggagccggcct
gcctactctctgaaggaggttgagagcctcgccgtggggcccccatgcccgccactgaat
tcctctaactctttcatgtccaggagggagaggagtagacggttgaccatgtctgtgtgg
gagcagagaaccagccaactgcgcaggcaccggcatatgtccagccgagagatactcttc
agcaaccccaatgaggagcaggaagggccccctggctgtccccaccacctcaaagcaaca
ggcacacccacaggcagcctgaagctgcctgatcccacagctgaccctaaggccttcaca
gctaagcccccaaagcccatggagatgcccctagaggaaccagccctgtccatgggtgtc
cctgagctccacttatccaaccctttagcagagccacccgatcccactgacacgcccctg
cctgacccccccacgtccacagctgtgttcataccggagcctacagaatctgagccatgc
ccagagggcaagcgtggcatccccaaccactgccaccaaggcctcaatggccgcaggagc
ccctggttgaatggggagagaaggcagagagcggtgcgtaagttccgccctcctgctagt
gacaccctgtccattgacatggaaggcatgtggctcaggaggccacagggcacagggcac
tgtgaggctcaggctggggccagaggcctggactcgcctcagggctcggagggcagtagc
cgctctgtcagcatggagaggaagaccccagaggacccagtggaggaggtgaggaaagac
ggtaacgagggagaaacaagccagccttccgagaccagggaggctgaacacagacagagg
gaccatgatcagactgggggtcctgagctgcagaacagggaggagggtctacagtcaggt
ccacccacactgcagccatctcaggctgcagtactggcgctaccagagggccccacagga
gacagtgagaccgatagcaacgccaccactctgaaccagtcccctctgagctccagtatc
gtcatcgaggtgaccgatgtccagtcgtcactagagctcacccccatcacaggcaacagt
aaagacgtggaggcatccaagcctgagaaggacgaggaagaggtggccagcccagtcaat
actgtcacacctgacagtatgttcatcttcaaacctgacaacccgatccgccgggcctgt
cactatgtggtgaacctgcgttactttgagatgtgtatcctgctggtgatcgctgccagc
agtatcgccctggctgcagaggaccccgtttcagccacctccgactggaacaaagttttg
cgttactttgactacgtgttcacaggtgtctttacctttgaaatgataataaagatgata
gaccagggcttgattctccatgatggctcctatttccgggacctgtggaacattctagac
tttatcgtggtggtcggcgctctggtggccttcgccctcacgaatgtgctgggaaataat
aaaggacgggacatcaaaaccatcaagtctcttcgggtgctgcgcgtcctgaggcccctg
aagaccatcaagagactaccgaaactcaaggcagtgtttgactgtgtggtgacctctctg
aagaacgtcttcaacatcctcatcgtctacaagctcttcatgttcattttcgctgtcatc
gctgtgcagctgttcaaggggaagttcttctactgcactgacggatccaaagacacagag
aaggactgccagggcttctacatcaactatgagaaagacaagcaggaggtgaagaggagg
gagtggaggagacatgactttcactatgacaatatagtctgggccctactcactttgttc
accgtctccactggggagggctggccacaggtcctgcagcactctgtggacgtgacagag
gaggacagaggacccagccagggcaacaggatggagatgtccatcttctatgtcatctac
tttgtggtcttccccttcttcttcgtcaacatatttgtggctctcatcatcatcaccttc
caggagcagggagacaagatgatggaggagtgcagcttggagaagaatgagagggcttgc
attgactttgccataagtgccaaacccctgacccgctacatgcctcagaacagacagacg
ttccagtaccgcctctggcactttgtggtctccccctccttcgagtacaccgtgctggcc
atgattgcgctcaacaccattgtcctgatgatgaagtactactcagccccaccagtgtac
gaggctgtgctgaaacacctgaacacagccttcactgtgctcttctctgtggagtgtgtc
ctcaagatcatggcctttggctttctgaactactttcgagacacttggaatatatttgac
ttcatcacggttttgggcagcatcacagaaatagtggtggacctgcagtcaattgagacc
ttcaacatgggtttcctgaagctgttccgagctgctcgactgatcaagctgttgaggcag
ggctacaccatccgcatcctgctctggacctttgtccagtcctttaaggctctcccctac
gtctgtctgctcattgccatgctcttcttcatatatgcaatcatcggaatgcaggttttt
ggaaacatcagactggatgaggagactcacatcaaccaacacaacaacttcaagaccttc
tttggtgctctgatgttgctattcaggagtgccacgggggagtcgtggcaggagatcatg
ctgtcatgtttaggggggcagaagtgtgagccagaccccttagctctaacgtcagaccat
gaggagcactgtggaactgagtttgcctacttctactttgtttccttcatcttcttcagc
tcatttctgatgctgaatctgtttgtggctgtgatcatggacaactttgagtacctcacc
cgggattcttccatcttggggcctcatcatctggatgagtttgttcgtatctggggtgaa
tacgaccgagctgcttgcgggcgtattcattacactgacatgtacgagatgctgactgat
atgtcgccacctcttggcctcggaaagaaatgtccctccaaagtggcttataagaggctg
gtgctgatgaacatgcccgtggatgaggagatgtctgttcacttcacctccaccctcatg
gccctgatccgaacggccctggaggtcaagatagccagaggaggggaggacagggggcag
atggattcagacctacagaaggagatcagtatcatctggccacacctttctcagaagacg
ctagacctgctcgtccccatccacaaagccaatcatatgaccattgggaagatctacgca
gctatgatgatcatggactactacaagcagaacaaagcaaagaagctcaggcaacagctg
gaggagcagaaacacgctcccatgttccagcgtatggacgcgtccactctgcctcaggac
atcctctgcagtgccaaagccctcccctttctgacccacagcgctggatctgccctgacc
agaggagggtttgtggccttgaggcctatctccccccaggagatgttcatgcagcccatg
tcccaggaccttgaggataaagaggaggactaccaccactatcaccactatcaccaccac
cggctccacactctggttccggagcgcaaagagtttaaccgcatcctttgccctactaac
aggcaggatgccacactcaaggtgcccgggtgggcagtctctatccgagcctcgtctatg
cctcagctggctgtagacacacaggttgggacagacagcagcacattgatgaaacgctcc
ttctccactattggtgatcagtgcgtgaatgggctgtggcaggaggagtactctctggag
agggtcagttctgaccgtctgaatagaccacgacagaggaacatcagaggcatcaggtcc
aacctcagggaaccagtggatcatgagcgggggcgctccaaagagcggcgccacctgctg
tctcccgacgtgtcccgctgcaactctgaggagcggggccaggacccgtcacaggaacgc
aagcagtcccgctcccccagcgagggacgcgcacatgtccaccatagacagggcaacact
tcaggcagcccaggcccatctaactctgagtccagcaccccctgtggccgtcggcagctc
cctcagacgccattgcggccacgccctcacatctcctactcccccctgatatgccgagcc
cacccctccccccctgctgtcagcgagggcagagcccggacccaggaggcccctggagag
acggaggagcccttgtggagggaggaaggggagaggccagcccaggtggcaggagcagga
ttgggggtgggggtggtagtaggggtgagtgacccagggttaggggtcagtcacccacac
ccctcccctcaccggtacatctcggagccatacctgcccctgcacgaggagttccacagc
ccagactcctcaggcctggaggagactctgaccttcgaggtggccattgcaaccagtctg
ggtcggtccaacaccatcagctctgccccccagctcagacacaactggcaggtccccaac
ggacacttccataaacgcctgggtcaggccagctctgtggccacctgcgagctcctgtgt
gacaccgacgaggatgaccgctgttag
DBGET
integrated database retrieval system
