Salmo trutta (river trout): 115192563
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Entry
115192563 CDS
T08542
Name
(RefSeq) neurogenic locus notch homolog protein 2-like isoform X1
KO
K20994
Notch 2
Organism
stru
Salmo trutta (river trout)
Pathway
stru04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115192563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_3
Ank_5
Ank_4
EGF_3
EGF_Teneurin
JAG1-like_EGF2
EGF_MSP1_1
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
115192563
NCBI-ProteinID:
XP_029607066
Ensembl:
ENSSTUG00000001112
LinkDB
All DBs
Position
4:complement(51758804..51806298)
Genome browser
AA seq
2486 aa
AA seq
DB search
MGQLPVFSSGKVLVIVVCCVRLSLALQCLDAVKPCVNNATCATFTNGTGYCRCAAGFLGD
YCHHKDPCHPGYCLNGGNCSVAVSGIPGSPTCSCPLGYTGQHCQTPQNSTCYPNNPCANQ
GVCTLLSLDKYKCQCAHGWTGMRCNREDSCLSGPCANGGTCSSLSGGKFSCTCPPGYWGP
RCLNDTDECAASAPVCQNQGGCVNTPGSYRCNCAPGFTGRQCETPYIPCSPSPCLNGGTC
RPTSETSYWCHCLPGFNGTNCENNIDDCPDHQCRNGGTCMDGVNTYNCQCPPEWTGQFCT
EDVDECRLQPNTCQNGGTCSNIQGSYTCVCVNGWSGLDCSKNIDDCATAACTKGSTCIDR
VASFLCVCPYGKTGLLCHVNDACISSPCRDGAQCDTNPINGMFNCNCAPGYIGSTCNDDV
NECIIGFPSGPNPCEHGGSCVNTDGSFTCNCARGYDGPRCETDINECASSPCQNDGTCLD
RIGDYSCICMEGFEGTHCEIDINECASSPCLNQGTCLDQVKRYVCQCPLGFSGEMCQIDI
DECSSTPCLNGAKCIDRPNGYECECAEGFSGPLCKENIDDCDPEPCHHGVCRDGIATFSC
DCDPGYTGSICNVQVMECHSNPCQNRGRCIDLVNKYQCNCLAGTSGVNCEFNVDDCASNP
CEYGECQDGINEYKCVCAPGYTGAKCDVDIHECNSSPCMSGGTCVDKVNGFICQCPPGTH
GPLCHSGTDHCAPQPCVHGDCVEQQSGYNCECDSGWVGQHCDQEKDECQSSPCQHSGTCV
DRLNGYTCQCRPGFTGVNCEFNMEECASSPCENHGTCVDGVNTYSCLCDPPYSGKHCEEE
LVPCASHPCERGGVCQPTPDYTFYTCRCPSGWQGPRCTEDVDECRKNPCQNRARCINSQG
SYVCKCRPGYSGLNCQTNIDDCSPNPCLNGGSCVDEVGGFSCDCRQGFDGERCEAEVDEC
ASQPCQNGAVCRDYVNSFVCVCRPGFDGILCEHNIPECTESSCLNNGTCVDDINTFSCRC
RPGFYGTFCEYEQNECDSQPCKNGGTCTDGLGSYRCTCPVGYNGQNCQNFVNLCSQPLCQ
NGGSCSQSETTWLCHCPVGWTGMYCDVPNMSCQDYAARNGIQVELVCKHSGRCVNVGNAH
QCQCLPGYTGSYCNEMVDECLSNPCRNGATCMDYQGTYECMCKAGYQGVNCEYDVDECHS
NPCHHGGTCINLINRFSCACPPGTNGVQCEVNVDDCAPKPGSWELRCLNGGQCVDGVGRY
TCSCPPGFAGEHCEGDVNECLSGPCHSPGSLDCVQLANDYQCRCRLGYTGRHCESMVDLC
QSKPCHNSGTCSMNMSSVHGYTCICQPGFTGFNCGEVEGYNCAKLRCQNGGHCQETQVGR
PHCRCQPGFSGPRCETVHSCQNRPCLNGGTCMKDPHYQYSCHCPAHFSGRHCENVIFDPS
PSTPASCPYVECEQHSGDKVCDPQCNSHECQWDGGDCSLHWRQPWVNCTAPVACWELFRN
GRCDPECDNSGCLFDSFECQESAQSYCKYDKYCAAHYANKICDKGCNTEACGWDGLDCSG
DTPAEVADGTLVIVVLLQPEELMGDMRGFLRSLGTLLHTNLRVKMDDQQKPMLYPYYGLE
HDDGNEGQPSTMMLRGKRELDKEVIGSKVYLEIDNRKCSERSMDCFSSTELAASFIAAEY
LKSELPYPVVSVNSDPTEPHKPPFLLYLAVGAAVIILLILVLGVLAAKRKRKHGILWLPD
GFLAKKDDKRREPVGQDDFGMKNFKTQDGGMIDGGQRWMEEEAPPKKVRTEDKPLLPMGV
DGGVDRREWTLQHHKAADISLTPPQTDLEADCLDVNVKGPDGFTPLMLASLRNGGASDCG
LQAEEEEESGGDEPCPNAISDLITQGATLMAQTDRTGETALHLAARYARADAAKRLLDAG
ADANAHDNMGRTPLHAAVAADAQGVFQILIRNRATELDARMNDGTTPLILAARLAVEGMV
EELVHCHADINAVDDHGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEQTPLFLAARE
GSFEAAQVLLDHYSNRDITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHNGPNHMGG
GHSSLVCGGNGAGYMGMRPGPQGKKSRRGGAKVGGVGGATAKELKDMKAKRRKKPTGGEG
PAVGGASGNGTKAAGGLLESSVTMSPVDSLESPHLYIGDAAGASKTTNSPLLGSPSSRPL
LPPVSHMLGQQQSWVGLKHGYGGHMFSLLPQQMGSGHPSMSQHHGQGLLTPMNVTMSREQ
LPPIVTFQMMAPGGGQALLKQPQPGQVQSQGQNQGQPQSQQGPTHLHCPQGMLYQMPNVS
LQHSLSHSLPHPHGLAHGMVQDGQSRQQLPPYQAMQSPVDKYPTPPSQHSYATAGSEGTT
PGYPAHPPSEHPYLTPSPESPDPWSSSSPHSNSDWSDVTTSPTPLGNPHALPPLHHTHIP
EQLQPQSQQTQQNPQQPQRGNMQVFA
NT seq
7461 nt
NT seq
+upstream
nt +downstream
nt
atgggccaattacccgttttctcttcgggcaaagtattagtcatcgtcgtctgttgcgtt
agactttctttggctctccagtgtctggatgctgttaagccgtgtgtcaacaatgctacg
tgtgccaccttcaccaacgggacaggatactgcaggtgtgccgcaggtttcctgggtgat
tactgccatcacaaagacccgtgtcaccctggttactgtctgaatggggggaattgctct
gtggctgtgtcgggcatcccgggcagccctacctgctcctgtcccctgggctacaccggg
cagcactgccagaccccccagaactccacctgctaccccaacaacccatgtgccaaccaa
ggggtctgcaccctgctctccctcgacaagtacaagtgccagtgtgcccacggatggaca
ggcatgcgctgtaatcgtgaggacagctgtctgtcaggaccctgtgctaatggaggcacc
tgcagctctctgtctgggggcaagttcagctgtacctgtcctccaggttactggggtcct
cgctgcctcaacgacactgacgagtgtgctgcctctgccccggtgtgtcagaaccaaggg
gggtgtgtcaacacccccggctcctacaggtgtaactgcgcccccggattcactggccgc
caatgtgagaccccctacatcccctgctccccctcaccctgcctcaacgggggcacgtgt
cgcccaacctctgagaccagctactggtgccactgcctgccaggcttcaatggtactaac
tgtgagaacaacattgacgactgccccgaccatcaatgccgaaatggagggacctgcatg
gacggtgtcaatacttacaactgccaatgccccccagaatggactggtcagttctgtact
gaggatgtggatgagtgtcgcctgcagcccaacacatgtcagaacggggggacctgtagc
aacatccagggcagctacacctgtgtatgtgtcaatggctggagtggcctggactgctct
aaaaacatagatgactgtgctacggctgcctgcaccaagggctccacctgtattgaccgt
gtggcatccttcctttgtgtctgcccctatggaaaaacaggtttgctctgccatgtgaac
gatgcctgcattagtagcccgtgccgggacggggcgcagtgcgacaccaaccccatcaac
ggcatgttcaactgcaactgtgccccaggctacataggaagcacctgcaatgacgacgtc
aacgagtgcatcataggcttcccctcaggtccaaacccctgtgagcatggaggatcgtgt
gtgaacacagatggctcgttcacatgtaactgtgcgagaggttatgatgggccgcgctgt
gagacagacatcaatgagtgtgcgtccagcccctgccagaatgacggcacctgtctggac
cgcataggagactacagctgcatctgtatggaaggatttgagggaacacactgtgagatt
gacatcaatgagtgtgctagttctccatgtctgaaccaagggacctgtctggatcaggtc
aaacgctacgtctgccagtgccctctaggattcagtggggagatgtgtcagatcgacatt
gacgagtgttccagcacaccgtgtctcaacggggccaagtgtatcgaccgtcccaacggc
tacgagtgtgaatgtgctgaaggcttctcggggccgctgtgtaaggagaacatagatgac
tgtgacccagagccctgtcaccatggggtttgtcgtgacggcatcgccaccttctcctgt
gactgtgacccgggctacaccggctctatctgcaatgtccaggtcatggagtgccacagc
aacccctgccagaaccgtggacgctgcatcgacctggtcaacaagtaccagtgcaactgt
ctggctggcacctcgggggtgaactgtgagttcaatgttgacgactgtgccagtaacccc
tgtgaatatggagagtgccaggacgggatcaacgagtacaagtgtgtctgtgctccagga
tacacaggtgcaaaatgtgacgtggacatccatgagtgtaattccagcccgtgtatgagt
gggggtacgtgtgtggacaaggtaaacggcttcatctgccagtgtccccctggcacccac
ggccccttgtgccactctggcaccgaccactgtgccccccagccctgtgtacacggagac
tgtgtagagcagcagagcgggtacaactgtgagtgtgattctggctgggtggggcagcac
tgtgaccaggagaaggatgagtgccagtccagcccctgccagcacagcggcacctgtgtg
gacagactcaacggatacacttgccagtgtcgccccggattcacaggtgtgaactgcgag
ttcaacatggaggagtgtgcatcaagcccgtgtgagaaccatggtacctgtgtggacgga
gtcaacacctacagctgcctgtgtgatcctccatactccggaaaacactgtgaggaggag
ttggttccctgtgcgtctcatccatgtgagaggggaggtgtgtgtcagccaaccccggac
tacaccttttacacctgtcgatgtcccagcggctggcaaggcccccgctgcactgaggat
gtggatgagtgcaggaagaacccgtgtcagaacagggcccgttgcatcaacagccagggc
agctacgtgtgcaagtgtcgaccaggctacagcggtctcaactgccagaccaacatcgat
gactgctcccccaacccgtgtctgaacggtggttcctgtgtggacgaagtgggagggttc
tcctgtgactgccggcaagggtttgatggtgagcgttgtgaggcagaagtggacgagtgt
gccagtcagccgtgccagaatggagctgtgtgccgggactacgtcaacagctttgtctgt
gtgtgccggccaggtttcgacggaatcctctgtgaacacaacatcccagaatgcactgag
agttcctgtctgaataacgggacctgtgttgatgacatcaacaccttctcgtgtcgttgt
cggcctggtttctacggcaccttctgtgagtatgagcagaatgagtgtgactctcagccc
tgcaagaacggaggaacctgcactgacggcctgggctcctaccgctgcacctgccctgtg
ggctacaatggacagaactgccagaactttgtgaacctgtgtagccagccactgtgccaa
aatggagggtcttgttcccagtcagagaccacctggttgtgtcactgtcctgtgggctgg
actggcatgtactgtgatgtccccaacatgtcctgtcaggactatgctgctcgaaacggt
atccaagtggagttagtgtgcaagcactcgggtcgctgcgtgaacgtgggtaatgcccac
cagtgtcagtgcctgcctggttacacgggcagctactgtaacgagatggtggatgagtgc
ctttccaacccctgccgcaacggggccacctgcatggactaccagggcacatatgagtgt
atgtgcaaggctggctaccagggggtgaactgtgaatatgatgtggatgagtgtcactct
aatccttgtcaccacggaggaacctgcatcaacctcatcaaccgcttttcctgcgcctgc
ccacctggcactaatggtgttcagtgtgaggtgaatgtggacgactgtgctcccaagcct
ggctcctgggagcttcgctgtctgaacgggggccagtgtgtggacggggtgggacgctac
acctgctcctgcccccctggcttcgctggggaacactgtgagggggacgtcaatgagtgt
ctctctggtccctgccactctcctggcagcctggactgtgtacagctggccaatgactac
cagtgccgctgtcgcttgggctacacaggacgccactgtgagtccatggtggacctgtgc
cagtcgaagccgtgccataacagtggcacctgctccatgaacatgagctcagtgcatgga
tacacatgcatctgtcaaccaggcttcactggcttcaactgtggagaggtggagggctac
aactgtgccaagctgcgttgccagaacggcgggcactgccaggagactcaggttggtcgt
ccgcactgccgttgccagccaggcttcagtgggccacgctgcgagaccgtccacagctgc
cagaaccggccctgtctgaacggaggcacctgtatgaaggacccacactaccagtacagc
tgtcactgcccagcccacttctcaggcaggcactgtgagaatgtcatcttcgatccgtcc
cccagcacccccgcctcctgcccctacgtagagtgtgagcagcattctggggataaggtg
tgtgaccctcagtgcaacagccatgagtgccaatgggacggaggggactgttctctacat
tggcgccagccatgggtcaactgcaccgccccggtggcctgctgggagctgttccgcaac
ggtcgatgtgaccccgagtgtgacaactctggctgcctcttcgacagcttcgagtgtcag
gagagcgcacagtcttactgcaagtatgataagtactgtgcggcccactatgccaacaag
atctgtgataagggctgtaacacggaggcatgtggctgggacggcctggactgctctggg
gacacccctgctgaggtggctgacggaacgctggtgatcgtagtgttactgcagcccgag
gagctaatgggagacatgagaggcttcctgcgctccctgggaaccctgctgcacaccaac
ctccgtgtcaagatggacgaccagcagaaacctatgttgtatccgtactacggcctggag
cacgacgacggcaatgaaggacaaccttctacaatgatgcttagaggcaaacgggagcta
gacaaggaggttatcgggtctaaggtgtacctggagatcgataaccgtaagtgttctgag
cgctccatggactgcttctccagcacagagctggctgcatccttcatcgctgctgagtac
ttgaaatctgagctgccctaccctgtggtctctgtcaacagtgaccctacggaaccccat
aagccccccttcctgctctacctggctgtgggagcagccgtcatcatcctgctaatcttg
gtgctgggcgtgctggccgccaagaggaaacgcaaacacggcatcctctggctccccgat
ggcttcctggccaagaaggatgacaagaggcgagaacccgtgggccaggacgacttcggc
atgaagaacttcaagacccaggatggagggatgatagatggaggccagaggtggatggaa
gaggaggctccgccaaagaaagtaaggactgaggacaagcccctactgcccatgggtgtg
gatggaggagtggacagacgggagtggaccctgcagcaccacaaggctgctgacatctct
ctcactccaccacagactgatctggaggcagactgcctggatgtcaatgtcaaaggacca
gatggcttcacccccctgatgctggcctctctacgaaacggaggggcatctgattgcggc
ctgcaggcggaggaggaggaagagagcgggggagacgagccatgtcccaacgccatctca
gaccttatcacccagggtgcaacactcatggcccagacagaccgcaccggggagacggcg
ctccacctggctgctcgctacgcccgggccgacgctgccaagaggctgctggacgctggg
gcagatgccaacgctcacgacaacatgggtcgcacccctctccacgctgctgtggcagcc
gatgcccagggagtgttccagatcctgattcgtaaccgggccacggagttggatgccagg
atgaacgatggaaccacacctctgatcctggctgccaggctggctgtggaaggcatggtg
gaggaactggtacattgccacgctgacatcaacgctgtcgacgaccacggtaaatctgct
ctgcactgggcagctgctgtgaacaatgtggaggccactctggtgctgctgaagaatgga
gccaacagagacatgcaggacaacaaggagcagaccccgttgttcctggcagccagagag
ggtagttttgaggcggcccaggttcttctggaccactactctaatagggacatcacagac
cacctggaccggctgccccgtgacaccgcacaggagcgcatgcaccatgacatcgtacgt
ctgcttgaccagtacaacctggtccacagccctcacaatggccccaaccacatgggcggg
ggacactcttccttggtctgtggaggcaatggcgctggctacatgggcatgcgccccgga
ccccagggcaagaagagcaggcgcggcggggcaaaggttggaggggtgggtggggctaca
gcaaaagagctgaaagacatgaaggccaagcggagaaagaagccaacgggaggagaaggg
cctgcagtgggaggagccagtggcaacggcactaaagctgcaggagggctgttggagagc
tcagtcaccatgtcccctgttgactccctggagtctccacacttatacataggagatgct
gccggggcctccaaaacgaccaactctccgctcctgggcagcccctcctccaggcccctg
ctgcccccagtcagccacatgctgggccagcagcagagctgggtgggcctgaagcatggc
tacggtggccacatgttcagcctcctcccccagcagatgggcagtggccaccctagcatg
tcccagcaccacggccaaggcctgctcacccctatgaatgtcaccatgagccgcgagcag
ctgcctcccattgttaccttccagatgatggcgccggggggcgggcaggccctgctgaag
cagccccagcctgggcaggtgcagtcccaggggcaaaaccagggccagccccaatctcag
cagggcccaactcacctgcattgcccccagggcatgttgtaccaaatgcccaatgtgagc
ctccagcacagcctgtctcacagcctccctcacccccatggcctggcccacggcatggtg
caggatggccagtcccgccaacagctccctccctatcaggctatgcagagcccagtggat
aagtacccaacccctccttctcagcacagctacgctacggctggctcagagggcaccacc
ccagggtatccggctcacccgcccagcgagcacccttacctcaccccctcccctgagtcc
cctgacccctggtcctcctcctccccccactccaactcagactggtctgacgtcacaacc
agccccacccccctggggaacccccatgcactgccgcctctccatcacacacacattccg
gagcagctgcagccgcagtcccagcagacacaacagaacccccagcagcctcagcgtggc
aacatgcaggtgtttgcatag
DBGET
integrated database retrieval system
