Salmo trutta (river trout): 115192656
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Entry
115192656 CDS
T08542
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stru03016
]
115192656
Enzymes [BR:
stru01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
115192656
Transfer RNA biogenesis [BR:
stru03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
115192656
Prokaryotic type
115192656
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
115192656
NCBI-ProteinID:
XP_029607269
Ensembl:
ENSSTUG00000005795
LinkDB
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Position
4:complement(55801676..55817871)
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AA seq
645 aa
AA seq
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MADAEPMLVPAPGGEKRACPALEGKVAHSTKRPRVQKDENNGGGHSHKPAQDEAEETEPL
EEEDGEGVGLGSGEAFAEMMKHGLTELDVGILKFVSEHKGFSGILKERYSDFVVHEVNKE
GKTVWLDDLSVPEEAEEASVAEQPGSEVFTEEQKHELEQLQLFKNKEGNVSIEVADDTKE
KRTLVHKAVKTLYPGLETKTEEREGKKFIVAYHAAGQKALAEVKIAAAPRKHSWPKSRGA
FCHFVLYKENKDTMEAINVLSKFLRMRPNVFSYMGTKDKRAITVQEIAVLKVTAERLSHL
NKCLNNFKLGNFCYKKHPLKLGELQGNHFTVVIRNITGTDDQVQQAMTSLRETGFINYYG
MQRFGTTAVPTHQVGKAILQDNWNEVIDLILKPRPGAEKGYMVKCREEWAQSQDPEAALK
KLPVKRCVEGQLLRGLSMYGKKNIITAFAMIPRNNRLMYIHSYQSFMWNTMVSRRIEAFG
LKAVEGDLVLRGGTAFVLSAAEAETHSIQDVVMPLPGFDVIYPTHHVGKGYREKLSADNL
DIDNMRHRVRDYSLAGAYRRILIKPSDVNWEVINYDDPRISLVHTDVEKLEDQPPPVFNK
EGKYRALRMEFSLPPSTYATMAIREVLKMDTSIKNQTQLNTTWLN
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcagagcccatgctggtccctgcccctgggggggagaaaagggcctgccct
gccttggagggtaaggtggcccacagcaccaagagacccagagtccaaaaggatgagaac
aacggaggaggacattctcacaagccagcccaggatgaggcagaagagacagagccattg
gaagaggaggatggagaaggggtcgggttaggttctggagaggcttttgcagagatgatg
aagcatgggctcacagagctggatgtggggattctgaaatttgtcagtgaacacaagggc
ttctctgggattctcaaggagaggtactctgattttgtggtacatgaggtcaacaaagaa
ggcaagacagtgtggttggatgatctctcggttcctgaggaggctgaggaagccagtgtg
gcagagcagccagggtctgaggttttcacagaggagcagaaacacgaacttgagcagctg
cagctcttcaagaacaaagagggcaatgtgtccatagaggtggcggatgacaccaaagag
aaacggaccctggtccacaaagccgtcaagaccctgtaccctggactggagaccaagaca
gaggagcgggagggaaagaagttcatcgtggcctaccacgcagctgggcagaaagcactc
gcagaggtcaaaatcgctgcagcccccaggaaacactcctggcctaagagccgtggggcc
ttctgccactttgtcctttacaaagagaacaaggacaccatggaggccatcaacgtgctg
tccaagttcctcaggatgaggcctaatgtgttctcctacatggggaccaaggacaagaga
gccatcactgtgcaggagattgcagttctcaaggtcacagcagaaagactgtctcacctc
aacaagtgcctcaataacttcaagctgggaaacttctgctacaagaaacaccctctgaaa
ctgggggaactacagggaaatcatttcactgtggtcatcaggaacatcaccgggacagat
gaccaggtccagcaggccatgacctccctcagagagacaggctttatcaactactacggc
atgcagcgctttggcaccaccgccgtgcccacacaccaggttggcaaggccatcctgcaa
gacaactggaatgaagtgatagatctgatcctgaagcctcgccctggagcggagaaaggt
tacatggtgaagtgtcgtgaggagtgggcccagtcccaggacccagaggcagcgcttaag
aagctacctgtgaaacgctgtgtggagggacagcttctccgaggcctctccatgtacggc
aagaagaacatcatcactgcattcgccatgatccctcgtaacaaccggctgatgtacatc
cacagctaccagagctttatgtggaacaccatggtcagcagacgcattgaggccttcggg
ctgaaggctgtggagggagacctcgtgctcagaggaggcactgcattcgtgctgtctgca
gccgaggcggagacccactctattcaggacgtggtgatgcccctaccagggtttgatgtc
atctaccccactcaccacgtggggaagggctacagggagaagctgagtgcagataacctg
gacattgacaacatgagacacagggtgagggactactctctggccggggcctaccgacgc
atcctcatcaaacccagtgacgtcaactgggaggtgattaactatgatgaccctcgtatc
tctctggttcacactgatgtggagaagctagaggaccaacctcctccggtcttcaacaaa
gaggggaagtacagggctttgaggatggagttctctctgcctccctccacctacgccacc
atggccatcagagaggtgctcaagatggacaccagtatcaagaaccagacccagctcaac
accacctggctcaactaa
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