Salmo trutta (river trout): 115192696
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Entry
115192696 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3-like
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115192696
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115192696
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115192696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4
zf-RING_UBOX
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_2
zf-rbx1
EIF3I
Beta-prop_WDR3_1st
zf-RING_11
Beta-prop_WDR3_2nd
zf-RING_Vps41
zf-C3HC4_4
WD40
Beta-prop_WDR75_1st
zf-ANAPC11
CFAP43_N
WD40_WDHD1_1st
WD40_2
Rtf2
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_Prp19
Zn_ribbon_TiaS
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
zf-UDP
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
115192696
NCBI-ProteinID:
XP_029607334
Ensembl:
ENSSTUG00000012610
LinkDB
All DBs
Position
4:57728593..57743313
Genome browser
AA seq
715 aa
AA seq
DB search
MEAMEVDLLLGVPRREPEPDGMASHVGLPIIIPDSGSETEVEDEADAAPLDPPRLPTTWA
FSQNRIRVEGQVGPRIRTEGHIGPTVTTAAALRQRRARPGVRALYPTQTSASARRFLDFL
LRVPAANPDSGNTTESSESEDEADPAGPVNPHDPDEPAVPSSPRMNLPVAATPLQGLNPS
DSNATTEAARTETGNQVNPESVTAPVATSGAALRSSQGDEGDGETCSICFEPWTTSGEHR
LATLRCGHLFGYTCIDRWVKGQGQGAKCPQCNKKAKRSDIVLLYARKLRALDNTEQEDMK
RSLEQEQSMRRNAELESAQCRLQLQVMTDECGKLRKQIQELKTLMVQPGCRPSKNSGASL
SGLSQRQDSTQGGHYVFSKAVLVSQAGGCRVLSYCEPLSCLLASHPSPHTTLVPGYGVKK
VSTVNFKACQYVPIHVKQIRGLAFNRQADSLLLSAALDNTIKLTSLMTNTVVQTYNTGKP
VWSCCWCLDNNNYVYAGLSNGSVLVYDTRDTSTHVQELQPLRSRCPVASLSYVPRASSSS
FPCGGLIAGSLEGGCFWEQLDGTTYRPHILPLETGGCTDIQVEPESRHCLVTYRPGRSNP
SLRCVLMELNRTLQQDAAQEPSCSCYPVQTFSAGSSCKVLTKNAVFRSPAGEGSTLVCAG
DESTNSTMVWDAGSGSLIQKLPADLPVLDICPFEVNQGSYLASLTEKMLKIYKWE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatggaggtggacttgctgctgggggtccccaggagggaaccagaaccagat
ggtatggcaagccacgtagggctccctatcatcatccctgactctggcagcgaaactgag
gtagaggacgaggcagacgcggctcccctagacccaccacggctcccgaccacatgggcg
ttcagtcagaaccgaatcagagtggagggtcaagttgggcccaggatcagaacggagggt
catattgggcccacggtcactacagcagcagccctgaggcagcggagagccaggccaggc
gtcagggcgctctaccccacccagacctctgcctctgctcgccgcttcctagatttcctg
ctgcgagtccctgcagccaaccctgactctggcaataccacagagtcaagcgagtcagag
gatgaggcagaccccgcagggccagtaaaccctcacgaccctgacgaacctgctgttccc
tccagccctcgaatgaaccttcccgtggcagccacgccactgcaaggcctaaatccttca
gattctaatgcaaccacagaggctgcgaggacagagactggaaatcaagtgaatcctgag
agtgtaacagccccagtggccaccagtggtgcggctcttcggtcgtcccaaggggatgag
ggggatggggagacctgctctatctgctttgagccctggaccacgtcaggggagcaccgc
ctagccaccctgcgctgcggacatctcttcggctacacctgcatcgaccgctgggtgaag
ggccagggccagggagccaagtgtccccagtgcaacaagaaggccaagcgctctgatatc
gtcctcctgtacgcacgcaagctgagggctttggacaacacagagcaggaggatatgaag
aggtcattggagcaggagcagtcaatgcgtaggaatgctgaactagagtcagcccagtgc
cggctacaactgcaggtgatgacagacgaatgtgggaaactacgcaagcagatacaggag
ttgaagacgctgatggtccagcctggctgtaggccctctaagaactcaggggcctctctc
tccgggctctcacagaggcaggacagcacccaggggggccactacgtcttctccaaggcc
gtgctagtgtcccaggcggggggctgcagggtgctgtcgtactgtgagcccctcagctgc
ctgctggcctcccatccctccccacacaccaccctggtgcccggctacggtgtgaagaag
gtgagtacggtgaattttaaggcatgccagtacgttcccatccatgtcaaacagatcaga
ggcctggcattcaacagacaagctgacagcctcctgctctctgctgccctggacaacacc
atcaaactcaccagtctaatgaccaacacagtggtgcagacgtacaacacgggtaagcca
gtgtggagctgttgctggtgcctggacaacaacaactacgtgtacgctggtctcagtaac
ggctctgtgctggtgtatgacaccagagacaccagcacacacgtccaggagcttcagcca
ctacgctctaggtgtcccgtggcctccctgtcctacgtgcctcgtgcctcctccagctcg
ttcccgtgcggcggcctcatcgcaggttctttggaggggggctgcttctgggagcagctg
gacggcaccacttacagaccccacattttgcccctggagacaggaggctgcacagacatc
caggtggagccagagagcagacattgtctggtcacctacagaccagggcgctccaacccg
tctctgcgttgtgttctgatggagctgaacaggactttacagcaggatgcggcccaggag
ccctcgtgttcctgctaccctgtccagaccttcagcgccggctcctcttgcaaagtgctc
accaagaacgctgtgttcagaagcccggccggggagggctccactttggtctgtgccggg
gacgagtccactaactccaccatggtgtgggatgcagggagtggatccttgattcagaag
ttgcctgctgacctcccagtgttggacatctgcccgtttgaggtgaatcagggcagttac
ctggcatcgctcactgagaagatgctcaaaatctacaagtgggaataa
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