Salmo trutta (river trout): 115192701
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Entry
115192701 CDS
T08542
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4-like
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04260
Cardiac muscle contraction
stru04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115192701
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115192701
04261 Adrenergic signaling in cardiomyocytes
115192701
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115192701
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115192701
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA_3
dCache_1
VWA
VWA_2
dCache_2
CobT_C
Zn_ribbon_5
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
115192701
NCBI-ProteinID:
XP_029607344
Ensembl:
ENSSTUG00000015707
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Position
4:complement(57890935..57992735)
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AA seq
1236 aa
AA seq
DB search
MSSSGDTVDPGRMGLRPRARSGGETNRLGPRGTPSRLRLGPRGTPTGLRLGPRGTPTGLR
LGPRGTPTGLRLGPRGTPTGLRLGPRGTPTGMRLGPRGTPTGLRLGPRGTPTGLWLGPRG
TPTGLRLGPRGTPTGLRLGLWILCFSWFCFTAHAQMKIPPETVQFWANIFSVQLRETTTR
YSGANILQKKLKDVESIIKIVDIDGRDQVRDFAEDMERMLGSKMKSVKRLAESAEDADLY
HDFNKTLEFDYYNSMLVNTADEDGNFIELGGEFPLEKNEHFNNLPVNTMQSDVQVPTNVY
NKDAYILNGIYWSEALNDVFMNNFQKDPTLTWQYFGSSSGFFRIYPGIKWTPDSNGVAAF
DCRNRNWYIQAATSPKDIIIVVDISGSMKGLKMTIAKHTINTILDTLGENDFVNVIAYTD
YVRYVEPCFKGTLVQADLDNREHFKVLVDELHVKGEGKVAKAMKESFKILNEAATKGQGS
LCNQAIMLITDGAMEDFKDVFEEFNWPDRRVRLFTYLIGREMTFADNTKWIACNNKGYYT
HISTLADVQENVMEYLHVLSRPMVINHNHDIIWTEAYMDTVLPNTKELFATKAQSLLLMT
TVAMPVFSKKKETLSHGILLGVVGSDIPLLEVMKLAPRYRLGPHGYAFLITNNGYILAHP
DLRPLYKEGKTLKPKPNYNSVDLAEVEWEDIDETLRTAMVKGEMGTLSLNVRASVDKAKR
PLFLTNDYFYTTINDTPFSFGMVLTRGHGQLMFMGTVSVEEGLHDLTSPDLSISNEWTYC
ETDIDPHHRKYSQLQAVIRYLQGKEPDLECDEVLLQQTLFDAVVTAPLESYWQAIMLNAS
GMEVGVETAFLGTRSGLIRLTRYTGIETRVAKKFLTPADKDNLFTVDHFPLWYRLAMENP
PGRFVYYIPVEDKDNRDKTGASKYVIAATAVTVSSGGKMAMAGAIGVQMSLEMLEKRLWT
IAFQPADTDCTEVEGVCPLSCQSTDVNCFLVDSNGFIIVSKERSEVGRFFGEVDGSVMAA
LIKSGMYKKVSLYDYQGMCRSGHSHSSSARPLLSPFYGLAAVIKWFFSHMLMFLLEFNFC
GLWHSDYVVDAKAGYHTSHKAKRTDALQPCDTEYPGFMLDNSIKETNSLLKCGRCQKMFV
VQAVPDSNLVLMVVQADCDCSRQYSSITLEPKEVKYNASVKCNRMKSQKVRRRPKSCHAY
HPKENAKDCGGASEISLSVALFLASLATSLALRRWT
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctcaggcgacacagtggacccgggcaggatgggactacgacccagagccaga
tcaggtggagaaacgaacaggctgggacccagagggaccccctcaaggctgaggctggga
cccagagggacccccacagggctgaggctgggacccagagggacccccacagggctgagg
ctgggacccagaggaacccccacagggctgaggctgggacccagagggacccccacaggg
ctgaggctgggacccagagggacccccacaggaatgaggctaggacccagaggaaccccc
acagggctgaggctgggacccagagggacccccacagggctgtggctgggacccagaggg
acccccacagggctgaggctgggacccagaggaacccccacagggctgaggctgggcctg
tggatcctgtgtttcagctggttctgcttcactgctcacgctcagatgaagataccgcct
gagacggtccagttttgggccaatatcttttcagtgcaactacgcgagactaccacaagg
tactctggagctaacattctacaaaagaaactcaaagatgtggagtccattattaagata
gtggacatcgatgggagagatcaagtgagggactttgcagaggacatggagagaatgctg
gggtccaagatgaagtcagttaagaggttggctgagtctgcggaggatgcagatttgtac
cacgacttcaacaaaacgctagagtttgactactataactccatgctggtgaacacagca
gatgaagatggtaacttcatagagctgggtggtgagtttcctctggagaagaatgagcat
ttcaacaacctgccagtcaacacaatgcagagtgacgtacaggttccaaccaacgtctac
aacaaagatgcctacatcctcaatggaatctactggtcggaggctctgaatgacgtgttc
atgaacaacttccagaaagaccccaccctcacctggcagtactttggcagctcctcggga
ttcttcagaatctaccctggtatcaaatggactccagattcgaatggtgtggctgcgttt
gactgcaggaaccgtaactggtatatccaggctgccacctcaccaaaggacattattatc
gtggtggacatcagtggcagtatgaagggtctaaagatgaccatcgccaagcacaccatc
aacaccatcctggacacactgggggagaacgactttgtcaatgtcatcgcttacactgac
tatgtgcgctacgtagagccatgcttcaaaggcaccctggtgcaggctgacttggacaac
cgcgagcattttaaggtgctagtggatgagcttcacgtgaagggagagggaaaagttgca
aaggccatgaaagaatccttcaaaatcttgaacgaggctgcgactaagggccagggcagc
ctgtgtaaccaggccatcatgctgatcacagatggagccatggaggacttcaaagacgtg
tttgaagagttcaactggcctgatcgcagggtgcgcctcttcacttaccttattggcaga
gagatgacctttgcagacaacaccaagtggatagcctgcaacaacaagggttactacaca
cacatctccactctggctgatgtgcaggagaatgtcatggagtaccttcacgtcctgagc
cgaccaatggtcatcaatcacaatcatgacatcatctggactgaggcttacatggacact
gtgctacccaatacgaaggagctctttgccacaaaggctcaaagtttacttctcatgacc
acggtggcaatgcctgtcttcagcaagaagaaagagacgctgagccatgggatcctgctg
ggggtggtgggttctgacatccccctgttggaggtaatgaagctggctcccagatatagg
ctgggtccccatggttacgctttcctcatcaccaacaatgggtacatcctggcacaccct
gacctacgacctctgtacaaagaaggtaagacgctgaagcccaagcctaactacaacagt
gtggacctggctgaggtggagtgggaggacatagatgagacactaaggacagccatggtg
aaaggggagatgggcactctgtctttaaacgtgagagcatctgtggacaaagcgaaaagg
cctttgttcttaacaaatgactatttctacacaaccatcaacgacaccccattcagtttt
ggtatggttctgacaaggggtcacggacagctgatgttcatggggacagtctctgtggaa
gaggggctgcatgacctgacgtcccctgatctatccatatccaatgagtggacgtattgt
gagacagacattgatcctcaccaccgcaaatactctcagcttcaggctgtcattcgctac
ctgcaggggaaggagcctgacctggagtgtgatgaggtgctgctgcagcagacactgttt
gatgccgtagtgacagcccccttagaatcctactggcaggccatcatgctcaatgcatct
gggatggaggtgggtgtggagacagcctttctgggaactcgctctggccttatccggctc
accagatacactggcatagagaccagggttgccaaaaagttcctgactccagctgataag
gacaacctgtttaccgtggaccatttccccctgtggtaccgcctggccatggagaacccc
cctggacgcttcgtctactacatccctgtggaggacaaagacaacagagacaagacaggg
gcttcaaagtatgtcatagccgccacagctgtgactgtgtcatcgggaggcaagatggcc
atggctggagccattggggtgcagatgtccttggagatgctggagaagaggctatggacc
attgcctttcagcccgctgacacagactgtactgaagtggaaggtgtctgccctctcagc
tgtcagagcactgatgtcaactgtttccttgtggacagcaacggcttcatcatagtctct
aaagagaggtcagaggtcggacgtttctttggggaagtggacgggtctgtgatggcagcg
ttgattaagtcgggcatgtacaagaaggtgtcgttgtatgactaccagggaatgtgcaga
tcaggacacagtcattccagtagtgctcgccctctgctcagccctttctatggccttgct
gcagtgattaaatggttcttctctcacatgttgatgttcttactggagttcaacttctgt
ggtctatggcactcggattacgttgtagacgccaaggctggctaccatacatcccataaa
gcaaagaggacggacgcgttgcagccgtgtgacacagagtaccctggcttcatgttagac
aactccatcaaagagaccaacagcctcctcaaatgtggacgctgtcagaagatgtttgtg
gtgcaggcagtccccgacagtaacctggtgctgatggtggttcaggcggactgtgactgc
tcccggcagtactcctccatcaccctggagcccaaagaggtcaaatacaacgcatcagtc
aagtgtaacaggatgaaatctcagaaagtccggcggcgcccaaagtcctgccatgcctac
catcctaaggaaaatgccaaggactgtggaggagcttcagagatcagcctatcggtggcc
ctcttcttggcttctctggccacctcattggccctgcgcagatggacttaa
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