Salmo trutta (river trout): 115192848 Help Entry 115192848         CDS       T08542                                  Name (RefSeq) aggrecan core protein-like   KO K06792   aggrecan 1 Organism stru  Salmo trutta (river trout) Brite KEGG Orthology (KO) [BR:stru00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:stru00535]     115192848    00536 Glycosaminoglycan binding proteins [BR:stru00536]     115192848    04091 Lectins [BR:stru04091]     115192848 Proteoglycans [BR:stru00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    115192848 Glycosaminoglycan binding proteins [BR:stru00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    115192848 Lectins [BR:stru04091]  C-Type lectins   Lecticans    115192848 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Xlink Lectin_C Sushi V-set EGF Motif Other DBs NCBI-GeneID:  115192848 NCBI-ProteinID:  XP_029607603 Ensembl:  ENSSTUG00000013313 LinkDB All DBs Position 4:complement(63510232..63532404) Genome browser AA seq 1325 aa AA seqDB search MMTLLLLCVCLPFITSTISFEDPGDLDSNLSVSIPVEVALRPLMGTKVVVPCYFQDNMVN DPGASTVTPLSHRIKWTYVTKGKATLILLASEGKVHVETEYLDRVTMVNYPLVPTDVTME ITELRAKDSGTYRCEVMHGIENNYDWVDIQVQGIVFHYRVSTRYTLNFERAKAACIQNSA TIATPAQLQAAFDDGFHQCDAGWLSDQTVRYPIHEPREGCFGDKEEFPGVRTYGLREVNE TYDVYCFAQKMSGRVFYSMSVEKFTFYQAMDQCAKLGAKLATTGQLYLAWKSGMDVCNAG WLADGSVRYPINIVRPQCGGGLLGVRTVYLFPNQTGYPYPDSHYDAICYQEDDGAVKTTP FPEVATITDSPMVYPGLTTTPETEARGEVLTQAPLDTITMPPTLPIPPSVTDTVTKVTPV VGEEIISRVTAKPDVGFEFPLDDDTAMAPTGVVFHYRADSSRYALSFVEAQMACQSVGAV IASSQQLQAAYEAGLHHCDAGWLRDQTVRYPILSPRDKCSGNLENVPGVRSYGLRPATEQ YDVYCYVDRLKGELFYSSDYDSFSYEEAVAHCQKLNTTLATTGQLYAAWRQGFDKCRPGW LQDRSVRYPIHAPRPHCGGGKAGVHTIYAFPNQTENPDQHSRYDAYCFRAERVIIHTETR LNVTLVVEEEIINMTTRTDQLTPVSPIEPPVSVDVSGSASADHSSSGSGSGTPGHSGYTS GRASGEGSGSGFQVTFEGSGPVLSGEGSGSGDPQEAGEGSTTVTNPPKVGSGDSGSGVGD GSGVGEFSGGLPSSVLPHSGSGSGVPGDLSGSGDSVIIIVDGEMVDISKRQPTGQEFGQG GVDISGSGGMSGLYGLFSGDVTSTSGSGSPDISFTHSGLIDLTDQPTGEQEVSGYQTFST GFPSGFPSGFHSGSGFPSSRDKSHSGHEVIFLTDDGMMEVTARQGEQRPEQGRGYVEVSG DSSSQHEGSTSASGLSLGESPFAEGLSVVLPPGSTMTYPENIGSLGNTDRGDDLDLVEEG QEQKGLGGSTETIYVTAPSAVFPSMTTAPAVSMVNPAVVEEPAAVYATTEPCEPNPCGAG TCSVEDGVALCQCPHGFAREENCSTPVQGCAEGWVEFMGSCYLHFAERDTWPDAEQRCQE LNAHLVSITSQQEQEFVNSNAQDYQWIGLNDKDVQNEFRWTDGSPLEFENWRPNQPDNYF NSWEDCVVMIWHENGQWNDVPCNYHLPFTCKSGPVMCHSPPEVANARPMGSRKDRYPVNS IVRYQCDAGFTQRHPPVVRCRPDGRWEEPQVECIEPGATPSNRLHKRSIRRRSKAANSQS WRKRL NT seq 3978 nt NT seq  +upstreamnt  +downstreamnt atgatgaccttgctcctactgtgtgtgtgtcttcccttcatcacctcaactatatcattt gaagaccccggcgatctcgacagtaacctgagtgtcagcattcccgtggaggtggcgctg cgccctctgatgggcaccaaggtggtggtgccctgctacttccaggacaacatggtcaac gaccccggcgcatccactgtcactcccctgtcccaccgcatcaagtggacctacgtcacc aagggcaaggccaccctcatactgctggcgtcagagggcaaagttcacgtggagacggag tacctagaccgggtcaccatggtcaactacccgctggtgcccaccgacgtcaccatggag atcacagaactgcgtgccaaggactcgggcacttatcgctgtgaggtcatgcacggcatc gagaataactatgactgggtggacatccaggttcaaggcattgtgttccactaccgagtc tccacgcgctacactctgaactttgagagggccaaggctgcctgtatccagaacagtgcc accatcgccaccccagcacaactacaggctgcctttgacgatggcttccaccaatgtgac gccgggtggctctctgaccaaacagtcaggtaccccatccatgagcctcgtgagggttgc ttcggagacaaggaggagttcccaggagtgcgaacctacggcttgagagaggtcaacgag acttatgacgtgtactgctttgcacagaagatgtcaggcagagtgttctactccatgtcc gtggagaagttcaccttctaccaggcaatggaccagtgtgccaaactaggggccaagctg gccaccacagggcagctgtacctggcctggaagtctggcatggacgtgtgtaatgcgggc tggctggcagacggaagcgtccgctaccccatcaacattgtcaggccccagtgtggtgga ggactacttggagtgaggaccgtgtacctgttccctaaccagacaggctacccctacccg gactcccactatgatgctatctgctaccaagaggacgacggtgcagtcaagaccaccccg ttcccagaggtggccaccatcacagacagtcctatggtctatccagggctaaccaccacc cctgaaactgaggcaaggggggaggtgctgacccaagcccccctggacaccatcaccatg ccaccgaccttacccatcccacccagtgtgactgacacggttacgaaggttaccccggtc gtgggggaagagatcattagcagggtgacagctaaacctgatgtgggcttcgagttccct cttgacgatgacactgccatggctcctacaggtgtggtgttccactaccgtgctgactca agtcgctatgccctgtccttcgtggaggcccagatggcctgtcagagtgtgggtgcagtc atcgccagctcccagcagctacaggcagcctacgaggcagggctccaccactgtgatgca ggctggctcagggaccagaccgtcaggtaccccatcctgtctcccagagataagtgttca ggaaacctggagaatgtcccaggggtgaggtcctatggcctgagacctgctactgagcaa tatgacgtctactgctatgtggaccgcctcaagggggagctgttctattccagtgactat gacagcttctcctatgaggaggctgtagcccactgccagaagctcaacaccacactagcc accacagggcagctctatgccgcctggagacagggcttcgacaagtgtcgtccaggctgg ctgcaggatcgcagcgtccgctaccccatccatgccccaaggccccactgtggaggcggc aaggccggggtacacaccatctacgccttccccaaccagacagaaaacccagaccagcac tccagatacgatgcatactgcttcagagctgaacgtgtgattattcacactgaaaccaga ctcaacgttactctagttgtcgaggaggaaattatcaacatgacaaccagaacagaccaa ttgacgcctgtgagccccatcgagccacctgtctctgtggatgtgtctggttcagcctca gctgatcattcatccagtggtagtggcagtggaactcctggccatagtggatacacatct ggtagggcaagcggcgagggctcagggtctggcttccaagtcactttcgagggcagtgga cccgtcttgtctggagagggctctggctctggagatcctcaggaggcgggagaggggagt accactgtcaccaaccccccgaaagtcgggtccggggatagtggatctggggtgggagat ggatctggggtgggagagttcagtggtgggctaccgtccagtgtccttccccactcgggt agtggcagcggagtacctggggacctgagtggtagcggggactctgtcatcatcattgtg gacggagagatggtggacatctccaaacggcagcccaccggacaggagtttggacaagga ggtgtggacatcagtggctccggaggaatgtctggattgtatggcctcttcagcggggat gttaccagcacctctggttccggaagtcctgacatatctttcacgcattcaggtctcatc gacctgaccgatcagcccacgggagagcaggaagtctccggctaccagaccttctctact ggttttccaagcggtttcccctccggttttcacagtggctctggattcccatccagcagg gacaaatcccattcaggccacgaggtcatcttcctgacagatgatgggatgatggaagtg acggcacgtcaaggggagcagcgtccagagcaaggacggggttacgtagaggtcagtgga gacagcagtagccaacatgaagggagcacctcggccagtgggctctccctgggggagtca ccatttgcagagggcctgtctgtggtgctgccgcctggttcaaccatgacttacccagag aatatcggcagtcttggaaacacagacagaggggatgacctggatctggtggaggaaggc caagagcagaaagggctgggaggttccacggagacaatctatgtcacggcaccatcggca gtcttccctagcatgacgacagcacccgccgtctcgatggtgaaccctgctgtggtggag gagcctgctgcagtgtacgctactactgaaccttgtgagcctaacccgtgtggagcaggc acctgctctgtggaggatggcgtcgctttgtgccaatgcccacatggattcgctagagag gaaaactgcagcacaccagtgcagggctgcgccgagggctgggtggaattcatggggagc tgctacctgcactttgctgagagagacacctggcctgacgctgagcagcgctgccaagag cttaacgcccacctggtcagcatcacctcccaacaggagcaggagtttgtcaactctaac gctcaggactatcagtggattggactcaatgacaaggacgtgcagaatgagttccgctgg acagatggcagtccattggaatttgagaactggaggcccaaccagccggataactacttt aactcttgggaggactgtgtggtgatgatctggcacgagaacggccagtggaacgacgtg ccctgcaactaccacctgcccttcacctgcaagagtggacctgtcatgtgccactcgccc ccagaggtggccaatgccaggccgatgggcagcagaaaagaccgttaccctgtcaactct atagtccgctaccagtgtgacgcaggcttcacacagcgccacccgcctgttgtacgctgc cgtcccgacgggcggtgggaggagccccaggtggagtgtatagaacccggtgccacaccc agcaacagactacacaagaggtccatcaggagacggtctaaagcagccaacagtcagtca tggaggaagcgtctctaa

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