Salmo trutta (river trout): 115192970
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Entry
115192970 CDS
T08542
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115192970
Membrane trafficking [BR:
stru04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
115192970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
Motif
Other DBs
NCBI-GeneID:
115192970
NCBI-ProteinID:
XP_029607815
Ensembl:
ENSSTUG00000014342
LinkDB
All DBs
Position
4:71522099..71613021
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AA seq
1995 aa
AA seq
DB search
MMEETGPRIADYFVVAGLTDSSKPLEDELQLDDVPGRFPRSAPGGRPLAPITDVAVVICS
LGEAVPQGYTCLESTPSGLSAELNGASLRGPQIYLCYKRGRDKPPLTDLGVLFEWKEKLK
PGCHIVQTTPSGRPANISSSSSQRIYITYRRSPQSQPHTSLAVTDVCIIIPGKGETPPHT
FCKVDKNLNSSMWGSSVYLCYKKSLAKTNTIAYNAGLLCRYPEEDDDSFPLPESVPLFCL
PMGASIEFWPAHTKHSLPVFSTFVLTGASGDKVYGAAIQFYEPYPEDQLSDRQRSLLGLP
GTCSSGEGTKSVHANKSICLLSHWPFFDSFRNFLTFLYRYSISGPHALPIERHISHFMHK
VPFPSSQRPRILLQLSPHDSLMLSQPVSSPLPLSGGRLSTLLLNLGPKNATTLLVLTVTE
HKILVHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYF
DLYVPPSDVCCVDLDTNNILHKEEKRALTWKILPQKACKHLLNTLGNLYQQLTEGGQVNG
EDGLMEPTASDPDLASGEKSLHTLEMQIQEAFLRFMAAILKGYRSYLLPITQAPSERTTD
ASSLFDLQGFLKSRDRSHQKFYSQMIRTQMFIRFIEECSFVSDKDASLAFFDECVDKLYS
NGSKIQMDSDGPEDTRLIELDESHRSEHTVYINPPELRPLAQGEEHPLCYSYSGFPVLSR
DLLELQDGPHPPSASLTQRHTSPASPAAIFRRSKQEIRSAQRMAKTHASVPQMWSKCLLR
HCYGLWFICLPAYASACHSKVRALRMAYDILRKMQDKKLQAPDEVCYRVLMQLCGQYSQP
VLAVRILFEMKKAGVHPNAITYGYYNKAVLESTWPSNTRGGYFLWAKLRNVVLGVGRFKQ
LGRKQMVQNQTQGRDTQLSDYSDLDTVSHGSEDSTNDSVERVSIDTDFTKMDSSDDGSST
GGQSDQGYDSLSKEEERMMGRDSDRTPLAQEKSERESCPLRRQDHITTPGDSNRPKNRRL
RPNSLDLTGGQRTLRTITLNFTSNTMQVRGPAPKRPPPPNCKPGKVEASQADPTQNQERL
DGGEREEIEGNKDRDTPAMEVERRIVSCSVSGDGTEASDCSVSGDGTEAPDCSVSKQSSV
KNSSETVGRAIKRTGIVETGFDPLSIIAAETETETEGDVDSSSTSTARRDLAEEIEMYMK
VLSPLSSRTASMDLQNPSSPLLHAPSTPSKHSSHRPRPLSLTYSPCTSPRPPPPLLRANS
QLPLSRPKERLRPSSLVSPSSPTPSSTFSMDSLLTPTLSLDMFKSSFLSAGKGVAEKASR
LYSRLSSQTSLSQDVNCDQISVSSMTSVDPECTSLLEEGSVLDPEGFTSSYASPQHDSLT
CLRRSPARGRLVSQSPTSPCKVFRHNSFSSGLAPPSRGPQTPDSSPDASRFHLRHHYTTE
VLMCSCSRCKTCDCLVYDEEIMAGWTAEDSNLNTTCPFCGSSFLPFLTVHIRDLRHRTSD
ESHQPFGEDTAVSVKPETAAGALIPQSATAPSEERQDSEGVAGALIPQSATAPAEERQDS
EGVAGALIPQSATAPAEERQDSETTAGALIPQSATAPAEERQDSEGVAGALIPQSATAPA
EERQDSEGVAGALIPQSATAPAEERQDSEGVAGALIPQSTTAPAEERQDSEGASGCPQDP
VPGPTSDPNSPPPPASPPPPASPPPPASPPSPASTTTCSSPASSSPTPTPSPSPPAPVTV
PYLSPLVLWKELESLLGNEGDQVISSPSIVDQHPIVFWNLVWYYRRLELPSHLPGLILTS
QHCSQGHELPSHLPGLILTSQHFSQGHELQVPAQSVSSEDSKHVLVRILWDNPSLHQDSV
QALYMLWHAHCSLPSASGTVFEEDQPQDRLFSSEVLQGIVRSIQKGDVYRPMSQILQLLG
PELGFSRQRSLYRDLLFLALTALGKSNINTDAFDREYKVAYDRLSPSQVKLTHNCDRPPG
AGVMECRRIFGKPSL
NT seq
5988 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggagacaggtcctcgtatagcagactactttgtggttgcagggctcactgac
tcctccaagcccttagaggatgaactgcagctggacgatgttcctggtcgctttccccgc
tcggcccctggtggtcggcccctggcccccatcacagacgtagctgtggttatatgctca
ctgggggaagcggttcctcaggggtacacctgcctcgagtccactccgtctggtctgtct
gcagagctgaacggagccagtctcagagggcctcagatttacctctgctacaagagaggc
cgtgataaacctcccctcactgatctgggggttctgtttgagtggaaggagaagctgaag
cctggctgtcacatcgtccaaaccacgccctctggtcgccctgccaacatcagtagctcc
tcctcccagcgcatctacatcacctatcgccgctccccgcagagccagcctcacacgtca
ttggctgtcacagatgtctgcatcatcatcccgggcaaaggggagacgccccctcacacc
ttctgcaaggtggacaagaacctcaacagtagtatgtggggatcctcagtgtacctgtgt
tacaagaagtcactggctaaaaccaacacaatcgcatacaacgcaggtctgttgtgtagg
tacccagaagaggacgatgactccttccccctgccggagtctgttcctctgttctgttta
cccatgggagctagcatcgagttctggccagctcacaccaaacactccctgcctgtcttc
tctacctttgtactgactggggcttctggggacaaggtgtatggagctgccatccagttc
tatgagccgtacccagaggaccagctgagtgacaggcagcgttctctcctggggctaccg
ggcacgtgcagtagcggcgaggggacaaagagcgttcacgctaacaagagtatctgtttg
ctgtcacactggccgttctttgactcattcaggaactttctgacgtttctctacagatac
tccatctctggaccacacgctctgcccatagagaggcacatctcccacttcatgcacaaa
gtcccgttcccctcctcccagagaccacgaatcctactgcagctgtctccacatgatagt
ctgatgctgagccagcctgtctcctcccctctgcctctcagtggtggccgcctctccacg
ctgctccttaacctgggtcctaagaatgcgaccactctgctggttctgactgtaacagaa
cacaagatcctggtccactctctcagaccggccgtgctgaccagtgttacggaggccctg
gtgtcgatgatcttccccttccactggccgtgcccctacatccctctgtgcccgctggcc
ctggcagatgttctctctgccccgtgccctttcatcgtgggcgtcgactcacgttacttt
gacctctacgtgcctccgtccgacgtctgttgtgtcgacctggacaccaacaacatatta
cataaagaggagaagagggccctaacgtggaagatactaccacagaaagcctgcaaacat
ctcctcaataccctgggtaatctgtaccaacagctgactgaaggtggccaagtcaacggc
gaggacggtctgatggagcccactgcgagtgacccagacctggcgagcggagagaagagc
ctccacacgctagagatgcagatccaggaagcattccttaggttcatggcggccatattg
aaagggtaccgctcttacctcctccccatcacgcaggccccttccgaaaggaccacggac
gcaagctcgctgttcgacttgcaagggttcttaaagagccgggatcgttcccaccagaag
ttctactcccagatgatcaggacccagatgtttatccggttcatcgaggaatgttccttc
gtcagcgataaagacgccagtctggccttcttcgacgagtgtgttgataagctttacagc
aatggaagcaagattcagatggacagtgatggcccagaagacaccaggttgatagagctg
gacgagtcccatcgcagtgaacacactgtctacatcaaccctcctgaactaagaccgttg
gcgcagggagaagagcacccactctgctatagctactctgggtttccggtgctgagtcgt
gatttgttggagctccaggatggacctcaccccccctcagccagcctgacacagagacac
accagtccagccagccccgcggccatctttagacgctccaaacaggagatccgctcagcc
cagcggatggctaaaacacacgcctccgtcccccagatgtggtctaagtgtctactgcgt
cactgttacggcctgtggttcatatgcctgccagcctatgccagcgcatgccactccaag
gtgcgggcactacgcatggcctacgacatcctcaggaagatgcaggacaagaagctgcag
gcgcctgatgaggtgtgttaccgggtgttaatgcagctatgtggacagtacagccaacct
gtcctggcggtcagaatcctgtttgagatgaagaaggctggagtccatcccaacgccatc
acctatggttactacaacaaggcggtgttggagagcacgtggccgtccaatactagagga
ggctacttcctgtgggccaagctgaggaatgtggtcctgggggtgggacggttcaaacag
ctgggacggaaacagatggtccagaaccaaacccagggtagagacacacagctatcagac
tacagtgatctggacacagtcagtcatggtagtgaagacagtactaacgactcagttgag
cgggtctcaatcgatacagacttcactaagatggactccagcgatgatggatcaagcaca
ggtggccaatcagaccaaggctatgactctctatccaaggaggaggagaggatgatggga
agggacagcgacagaacaccactagcgcaggagaagtcagagagggagtcttgtcctctg
agaagacaggaccacattaccacacccggtgactccaacagaccaaagaaccgaagactg
aggcccaactccctggatctgaccggaggacagaggactctcaggaccatcacacttaac
ttcacctccaacaccatgcaggtccgaggccctgctccaaaacgcccgccgcctccgaac
tgcaaacctgggaaggttgaggccagtcaggctgatcctacccagaaccaagagagattg
gatggaggagagagggaggagatagaaggcaataaggacagagatacacctgccatggag
gtggaaaggaggattgtgagctgcagtgttagtggagatgggaccgaggcttcagattgc
agtgttagtggagatgggaccgaggctccagattgcagtgtctccaaacagagcagtgta
aaaaacagcagtgaaaccgtgggcagagccatcaagaggacaggtatcgttgagactggc
tttgaccctctgtccattatagcagcagagacggagacagagacggagggtgatgtggac
agtagcagtacctccacagcccgccgagacctggcagaagagatagagatgtacatgaag
gttctgagccctctgagcagcaggacggccagcatggaccttcagaacccgtccagcccg
ttactccacgccccctccaccccatctaaacactcatcccatcgacctcggcccctcagt
ctgacctactccccctgtacctccccccgaccccctcctcccctgcttcgcgccaactca
caactccccctctccaggcccaaagaacgtctccgtccctcctcgttggtctccccctcc
tcccctactccctcctcgactttctccatggactccctcctcacaccaactcttagtctg
gacatgtttaagagcagcttcctgtcggcagggaagggggtggctgagaaggctagcagg
ctctactctcgcctgtcatcacagacatcactctcacaggatgtgaactgtgaccagatc
agcgtgtcatcaatgacctcagtggacccagaatgcacctctctgttggaagagggctct
gtcctggaccctgaaggtttcacctcctcctacgcctccccccagcacgacagcctcacg
tgcctgaggaggagcccagccaggggacgcctcgtctctcagagccccacctcgccctgc
aaagtgttccgccacaactccttctctagtggtttggctcctccctctagaggtccccag
actccagactcctctcctgatgcctcccgcttccacctccgtcaccactacactactgag
gtgttgatgtgtagctgcagtcgctgtaagacatgtgactgtctggtgtatgatgaagag
atcatggcaggatggacggccgaggactccaacctcaacaccacatgtcccttctgtggc
tcttccttcctgccgttccttactgtgcacatcagggacctgagacacaggaccagtgac
gagagtcaccaacctttcggagaggacacggctgtttcagtcaaacctgagactgcagct
ggagcactgataccccagtcagccacagctccatcagaggagcgacaggactctgagggt
gtagctggagcactgataccccagtcagccacagctccagcagaggagcgacaggactct
gagggtgtagctggagcactgataccccagtcagccacagctccagcagaggagcgacag
gactctgagactacagctggagcactgataccccagtcagccacagctccagcagaggag
cgacaggactctgagggtgtagctggagcactgataccccagtcagccacagctccagca
gaggagcgacaggactctgagggtgtagctggagcactgataccccagtcagccacagct
ccagcagaggagcgacaggactctgagggtgtagctggagcactgataccccagtcaacc
acagctccagcagaggagcgacaggactctgagggtgcatctgggtgtccacaggaccct
gtcccaggcccaacttcagatccaaactctcccccacctccagcctctcccccacctcca
gcctctcccccacctccagcctctcccccatcccctgcctcgactacaacttgcagttcc
ccagcgagtagttctccaaccccgaccccatccccttctccaccagccccagtgacggtc
ccttacctgagtcccttggttctgtggaaagagctagagtctctgctgggtaatgaaggc
gaccaggtgatcagctctcccagcatcgtggaccagcaccctatcgtattctggaacctg
gtgtggtactaccgcagactggaactcccctctcacctgcccggtctcatactgacctca
cagcactgcagccagggacacgaactcccttctcacctgcccggtctcatactgacctca
cagcacttcagccagggacatgaactacaggtcccagcccagagtgtgtcttcagaggac
agtaaacatgtcctggtccgcatcttgtgggacaacccgtctctacaccaggactctgtc
caggccctgtacatgctctggcacgcacactgttctctcccctcagccagtggaacagtg
tttgaggaggaccagccccaggaccgtctcttctcctctgaggtcctacagggtatagtg
aggagcattcagaagggggatgtttaccggcccatgagtcagatcctacagctgttggga
ccagagctgggcttcagcagacagaggagtctgtacagagatctcctcttcctggcgttg
accgctctggggaagagcaacatcaacactgatgcatttgatcgtgagtacaaggtcgct
tacgaccgcctcagccccagccaggtgaagctgacacacaactgtgaccggcccccaggg
gcaggggtcatggaatgtaggaggatattcgggaagcccagtctgtga
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integrated database retrieval system
