Salmo trutta (river trout): 115193462
Help
Entry
115193462 CDS
T08542
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115193462
Membrane trafficking [BR:
stru04131
]
Protein recycling
Others
Others
115193462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
115193462
NCBI-ProteinID:
XP_029608007
LinkDB
All DBs
Position
5:15816581..15892849
Genome browser
AA seq
1430 aa
AA seq
DB search
MEEESGRGRSTNTQFDDSQTEVEDVLLDLIEANPDLCLTIKDLDEGCSTPSSCTDTLSLS
SSDLDLRSPERLSNKAHTTLGDEAIDSAAEKEMFRDALTSRPGGQDILEEYQTTKTLDHR
TRREMIAILVSHMKEMHDHAAALKTILMGAMVDSHTSLLSEEDSKIDNYYIVVDKRLVPC
QATSGLCAFDELFKVHFLFNLTNSPAPRELSKVGFDPFGKGTEDEVVGVAEKSPGCHPFK
SSCKKVNVAEYLARVSGDGEARSSVPESEHPFVNKSYSRGLEERRLVDSSEVLYQHQSAS
GITSKLIDRPMSPPATLNKVTVNNTRHNTMNSFGRENRLKRHALSKKKAGASLRNLRRRR
KRSFQTAESRTSWSGFRWNGEDASTSVQHELKLSSSTFALTGDSAHNQAMVHWSGQNSSV
ILMLTKYFDFSLGSVTESSLWRSTDYGTTYEKLDEKVGPKTILSYLYVSPNNKRKIMLLT
DPEVESSLLISFDEGASYQRYHLAFDILSLLFHPEQEDWILAYSHDQKLYVSVEFGRRWQ
LVHDSVVPNRFYWSKLGLDKEPGMIHLETSISDRRSQYITCKLQNCTEANKGRPFPGFIS
LDSLVVQDQYVFIQVPMGGRPVHYVSYKRNAFFPMKLPKYTFPKDLQIISTDDNQVVAAV
QDWHQNDSYNLYMSEARGLFFTLALENVVSSGGPEGNVMIDLYEVAGIKGVFLSNKVVEN
EVKTFITYNKGRDWRLLHAPTTDLSGTRLYCVQPYCSLHLHLHVSDNPYTSGNIVSKESA
PGIIIASGTIGPELTANNVSIFITSDAGNTWREVFEEEYSILFLNQGGALVAIRHTPLPI
RHIWLSFDEGRHWNKFSFTSSPLYVDGVLGEPGEDTLIMTIFGHFSHRSEWQLVKIDFRP
IFNRRCTTDDYQTWQLHNDGKVCIMGVKRIFQNLKPDARCVKTKDQYISQMSDSCSCTEA
DFECDYGFERQSDGGCTAAFWFVPSSVSRDCTTGDSFLNTTGYRKALSNNCTAGTLGKYR
LRRQRCPHQAPRGLQLVTSEGTLTATLGDNVTFLVFLEEGDGSTTSITVDFGDGTAISYA
NISSIEDGVKHTYSKVGIYQVAAMALNSLGSERVLLYLHVTCTLEQVQLSAPSVVVRNKA
VNLSTVLKPSYVGTVTYFWWFNNHTEPVVTLVGGMSFTFYKEGTHTVTVQVSVGNTVLQD
KITVAVYEHFWSHVLAFSSNLDAFNPAVAEWRQDISRVVKDSMVQVTGINGEQLLVSVLP
GLPTAAELFIVPEKRSTEGTMNRKGTHLEQLSQVLLSALNQDLIQFTLQPGVQVNVYPTR
LSPAPLVDTSESGHNGAAVIMLVSVVFVCLAVFVIYKFKRKIPGINKYTEERSEKQQEVI
PTVASIAVPNPEGDMVTSLEHLDTGPDARGIGYLPSLTDIKLSDETPHVF
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaaagtggaagagggagaagcacaaatacacaatttgatgattcccaaacg
gaggtggaggatgtcctgctggacctgattgaggccaatccagacctgtgcctcacaatc
aaagatcttgatgaaggctgttcgacacctagttcgtgcacagacacattatccctctcg
tcaagtgacttagacctgagatctccagaaagactgtctaataaggcccacacaacatta
ggagatgaggccatcgactccgcagcagaaaaagagatgttccgagatgccctgactagt
agacctggcgggcaagacatattagaagagtaccagacaaccaaaacattggaccacaga
accaggagagagatgattgccatcttagtcagccacatgaaagagatgcatgatcatgct
gcagcattgaagaccatcttgatgggagccatggtcgacagccatacttccttgctgtcg
gaagaagacagcaagattgacaactactacatcgtggtggacaagaggctagttccctgc
caggcaactagtggtctgtgtgcatttgatgaactgttcaaagtccactttctcttcaac
ctgacaaactcaccggctccccgggaactctctaaagtgggatttgatccatttggaaag
ggaactgaggatgaagttgttggggtggcagagaagtcaccaggttgtcacccctttaaa
agcagctgtaaaaaagtaaatgttgcggaatatttagcgcgcgtctccggtgatggcgag
gcaagaagttcagtccccgaatccgagcatccgtttgtaaataaatcatacagccgtgga
ttagaagaacgtcggctcgtggatagttctgaagtgctctatcaacatcaaagtgcctcg
ggcatcacctccaaactcatagataggcctatgtctccacctgccaccctcaataaagta
accgtcaataacactagacataatacaatgaatagttttggaagagaaaatagacttaaa
cgacatgcgttatcaaaaaagaaggctggggcaagtttgaggaaccttcgccgtcgacga
aagcgcagcttccagacggcggagagcagaacatcttggtccggattccgatggaacggt
gaagatgcgtcaacctccgtgcaacatgagttgaaactcagtagttctacattcgcactc
acgggtgattcagctcataaccaagccatggtgcattggtccggccaaaatagcagcgtg
attctaatgctgactaagtactttgacttcagccttggcagtgtcacagagagctcttta
tggaggtcaacagactatggaaccacgtatgagaaacttgatgaaaaggtcgggccaaaa
accatactaagctacttgtacgtgagtcccaataacaaacgaaagatcatgttactgact
gacccggaggtggagagcagcctgctcattagctttgacgagggcgcatcctatcagagg
taccacttagccttcgacatcctcagcctcctcttccaccccgagcaggaggactggatc
ctggcttacagccacgaccagaagctctacgtctctgttgaatttggaagacgatggcag
ctcgtacatgacagtgtggtccccaacagattttactggtcaaaactgggtttggacaaa
gaaccaggaatgattcacttggagacaagtatttctgacagacgatcccagtatataaca
tgtaagctgcagaactgcacagaggccaacaaaggcaggcctttccctgggttcatcagc
ctggattccctggtggttcaggaccagtatgtattcattcaggtaccaatgggtggccgg
cctgtccattatgtgtcatacaaaagaaatgctttcttccccatgaagctgcctaagtac
acatttccaaaggacttgcagataatcagcacagatgataaccaggtggtggcagcagtg
caggattggcaccagaatgactcctacaacttgtacatgtcagaagcccgcggtctcttc
ttcactctggccctggagaacgtagtgagcagtgggggaccagagggcaacgttatgata
gacctctatgaggtagcagggataaaaggggtgttcttgtcaaataaagttgtcgagaac
gaagtgaaaacatttatcacttacaataaggggcgagactggcgtcttctacatgcacct
accactgatctgagcggtaccagactctactgtgtacagccctattgttcattgcacctg
catctccatgtgtctgacaacccgtacacgtctggaaacatagtcagcaaagaatcagct
ccaggaattataatagcatcaggtaccattgggcccgagctgaccgccaataatgtcagc
attttcatcacctcagatgctggcaacacttggagagaggtatttgaggaggagtatagc
atcctctttcttaaccagggcggtgccctagtggccattcgacacacacctctccccatc
agacacatttggttgagttttgatgagggaagacactggaacaaattcagctttacctcc
tctcctctctatgtagacggagtcttaggagagccaggggaggacaccctcatcatgaca
atatttggccatttcagccatcgttctgaatggcagctcgtcaagattgacttcaggccc
atcttcaacagaaggtgcaccacagacgactatcagacctggcagttacacaatgacggt
aaagtctgcatcatgggagtgaagagaatcttccagaatctgaagcccgacgccagatgt
gtcaaaaccaaagatcagtacatctcccagatgtcagactcctgttcatgcactgaggct
gactttgagtgtgattatggctttgagaggcagagtgatggaggatgcactgctgccttc
tggtttgttccatcctccgtgtccagagactgcaccactggggacagcttcctaaacact
acaggataccgtaaggctctgtccaataactgcactgcgggaaccctggggaagtaccgc
cttaggagacagaggtgtccccaccaggcccccagaggtctgcagctggtcaccagtgag
ggaacactcacagctaccctgggggacaacgtgaccttcctggtgtttctggaggagggt
gatggctccacaacaagtataacagtggactttggagatgggacggccatatcctacgct
aacatcagctccatagaggatggggtcaaacatacctacagtaaagtgggcatttaccaa
gtggctgccatggcactcaacagcctgggctctgagagagtcttactatacctacatgtt
acttgtacactggagcaagtgcagctttcagctccttctgtggtagttaggaataaagca
gtgaatctatcaacagtcctaaagccaagttacgttggaacggtcacatacttctggtgg
ttcaacaaccacactgagcctgtcgtgactttagtgggaggaatgtccttcaccttctac
aaggagggaactcatacggtcaccgtgcaagtgtcagtaggcaacaccgtccttcaagac
aaaataactgttgcagtctatgaacatttctggtcacacgttttagcattctcctctaat
ctggatgccttcaatcctgctgtggctgaatggagacaggacatcagtagggtggtcaag
gactccatggtccaagtcacagggatcaatggagagcagcttctggtgtcagtgctccca
gggttgccaacggcagcagagttgtttatcgtcccagagaaaaggtcaacagaggggacg
atgaatagaaaagggacacatttagagcagctttctcaggtcctgctaagtgccctgaac
caagacctcatccagtttactctgcagcccggggttcaggttaacgtttaccccacacga
ctgtctccagctcctctcgtggacaccagtgagagtgggcacaatggtgctgcagtcatt
atgctagtgtctgtagtatttgtgtgtttggcagttttcgttatctacaagttcaaaagg
aagatccctggcatcaacaaatacacagaggagaggtcagagaaacaacaggaagtgatc
cctacggtggcgtccatagctgtcccaaatcctgagggagacatggtgacctctttggag
cacttggacacagggccagatgcacgtggcataggatacctgccatctctcacagacatc
aaactctcagatgaaactccccatgtgttttaa
DBGET
integrated database retrieval system
