Salmo trutta (river trout): 115193470
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Entry
115193470 CDS
T08542
Name
(RefSeq) LIM domain-binding protein 3-like
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
stru
Salmo trutta (river trout)
Pathway
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115193470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115193470
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
115193470
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
115193470
NCBI-ProteinID:
XP_029608016
LinkDB
All DBs
Position
5:22170920..22227079
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AA seq
783 aa
AA seq
DB search
MSSYNISLSGPAPWGFRLQGGKDFNMPLTISRITPGSKAQQGNLIQGDIIVAIDGVSTEG
MTHLEAQNKIKSASFNLALTMQKSKRPFPLSTSTQRMDSPMQQIPHQKVISNTPANNEYV
PNFNAIALKDTALSTHKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDAIAGQSKGHEA
GSLPVKDAQVDSASPVYQAVIKTADRDMELNDWARSSSQVQSKSFRLLAHITGTEFMQDP
DVEHLRKSREKFDTEFKGPRFAKLKNWHNGLSAQILNLPEKALVSSSSYIHTALHMDFGP
QTADGFLSMQFNLLCSSPVEHAPVSTSPTHVALPASAASPNQAASPTAAYQSPEPAPVAP
EPTPESYSLQQSASVSSLHGQAPPMQKAPPMYQGQSMYQGLCMQKGPPMQQGPSMYQGLC
MQQGPPMYQGPSMYQGPAMQQGPPMYQGSPMHQAPPMQRHPMQQPPSMQQSSIQIPVGPP
PPKVVSTACIVPAPAPVPATASAAPEPPSSRPPWITDNSFANKFDPSKSTSTSMKVPALP
QSAPPAPAYIPNPGSAHTHTPPSAPSPAYNPSPAPYNPAPAPFPPIARGVAQRAERFAAN
SSRAPLCGACNNMIRGPFLVALGRSWHPEEFNCHYCHTSLADCSFVEEQNAVYCENCYGE
FFAPTCARCNTKIMGEVMHALRQTWHTTCFVCAACGKAFGNSLFHMEDGEPYCEKDYISL
FSTKCHGCDFPVEAGDKFIEALGHTWHDTCFVCAVCHVNLEGQPFYSKKDKPLCKKHAHA
INV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgagtagctacaatatttctctgagtgggccggccccatggggcttccgattgcaggga
ggcaaggacttcaacatgcccctgaccatctccaggatcaccccagggagtaaggcacag
cagggcaacctgatccagggtgacatcatcgtggccatcgacggggtcagcactgaaggc
atgacccacctggaggcccagaacaagatcaagtctgccagcttcaacctggccctcacc
atgcagaagtcaaagcgcccatttccactttccacatccacccaaagaatggattctccc
atgcaacagatccctcaccagaaggttatttccaacactcctgccaacaacgagtatgtg
cccaacttcaacgccattgcgctgaaggacactgccctgtccacccacaagcccatcgag
gtgaagggtcctgggggcaaggccaccataatccatgcccagtacaacacccccattagc
atgtactcccaggacgccatcatggacgccatcgccggacagtccaagggccacgaggcc
ggttcgctcccagtaaaagacgctcaggtagacagtgcctccccagtttatcaggctgtg
atcaagactgcagacagggacatggagttgaatgactgggcccgcagctcctcccaggtg
cagtccaagtccttccgcctcctcgcccacatcacgggaacggagttcatgcaagaccca
gacgtggaacatctgaggaaatcaagggaaaagtttgacacagaatttaaaggtccacgt
tttgccaaattgaaaaattggcacaatggcctgtctgctcagatccttaacctgccagaa
aaagccctggtttcctctagttcatatatacacacagccctacatatggatttcgggccc
cagactgctgatggttttctctcaatgcaatttaaccttttatgcagtagccctgttgag
catgctccagtttccaccagccccacacatgtcgctctccctgctagcgctgcttcgccc
aatcaggcggcttcgcctactgctgcttaccagtctccagagcccgcccccgtagcccct
gaacccacccctgagagctacagtctgcaacagtctgcctcagtctccagcctacatggc
caggctccccccatgcaaaaagcccctcccatgtatcaggggcaatccatgtaccagggg
ctttgtatgcagaagggacctcccatgcagcagggaccttccatgtaccaggggctttgc
atgcagcagggacctcccatgtaccagggaccttccatgtaccagggacctgctatgcag
cagggacctcccatgtaccaggggtcccccatgcaccaggccccgcctatgcagcgacat
cccatgcagcagcctccatccatgcagcaaagctccatccagatccctgtgggccctcct
ccacccaaggtggtcagcacagcctgcattgtgccagctccagcccctgttccagccaca
gcctcggccgcccctgaacccccctccagcaggccaccctggatcacggacaactctttt
gccaacaagtttgaccccagcaagagcaccagcaccagcatgaaagtgcctgctctacct
cagagtgccccaccagcaccagcctacatcccaaaccctggctccgcccacacccacacc
cctccctctgccccaagccctgcctataatcccagccccgccccctacaaccctgcccct
gcccccttccctcccattgcccggggcgtagcccaaagggcggagcgctttgctgccaac
agcagcagagcacccctctgcggcgcttgcaacaacatgatccggggacccttcctggtg
gccttgggtcgctcctggcacccagaagagttcaactgtcactactgccacacatcgctg
gcagactgcagctttgtggaggagcagaacgcagtgtactgtgagaactgctacggagag
ttctttgctcccacctgtgcacgctgcaacaccaagatcatgggggaggtgatgcatgct
ctgcggcagacatggcacaccacttgctttgtgtgtgctgcctgtggcaaggcctttgga
aacagcctattccacatggaggacggggagccttactgcgagaaagattacatttcactc
ttcagcaccaaatgccatggctgtgacttcccagtagaagcgggagacaagttcattgaa
gcactgggtcatacctggcacgatacctgctttgtctgtgcggtgtgccatgtgaacctg
gagggccagcccttctactccaagaaggacaagcccctgtgcaagaagcacgctcacgcc
atcaatgtgtaa
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