Salmo trutta (river trout): 115193490
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Entry
115193490 CDS
T08542
Name
(RefSeq) poly(A) polymerase gamma-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115193490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115193490
Enzymes [BR:
stru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
115193490
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
115193490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
GH97_C
Motif
Other DBs
NCBI-GeneID:
115193490
NCBI-ProteinID:
XP_029608033
Ensembl:
ENSSTUG00000017319
UniProt:
A0A673ZVM8
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Position
5:1183719..1204842
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AA seq
836 aa
AA seq
DB search
MKEMSANSNSMHGGQQPQKHYGITSSISMAFPREVDHQYTQKLSEAMKPFGVFEDEDELN
HRLAVLGKLNTFVKEWIAEISETKNLPPSAITNVGGKIFTFGSYRLGVHTKGADIDALCV
SPRHVERTDFFDSFFAKLKLHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIP
DNLDLRGDSHLRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSN
MLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPV
WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDDILQGKTDWS
KLFQPPNFFLKYKHYIVLTASASTEENQLEWIGLVESKIRVLVGNLERNEYITLAHVSPT
SFPGNKESCSENEFVSMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKD
GMKIEATHVKKKQLHQYLPVELVQRKKRSIVELNRNSNGGSSKRSSLDGSQLDSSRDSDS
GTPFSSPSSVCKPSRPAASDTDDSLTPPKPPVSLFVEISSSVPDVSPPRTNQEQGLSIPV
IGSKSKPSAPTGPVGRTIPTVVGRSVVSLPGSTSSTEQNQNGANRLHSPTLEDQSKRLKD
GAEPLADVLTFKEPYPPSGDGREQGDGVKVVSSPAGSTIPTVVGRSVVPCLDSSRDTTSP
TEQNQNGATAAAKRPHSPTQDGSPKRIRDTADLLVSGDDSAFKEPFPLSSDGQEQGDGVN
VESLGGVKAMPIPTIDTSRTQRLPSMELPDVTSPLPSSNHQRVVKNSIRLALNRHR
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatgtcagcgaacagtaacagtatgcatggcgggcagcagcctcagaaacac
tatggcattacctcgtccattagcatggccttccccagggaggtggaccatcagtacaca
cagaagctcagcgaggccatgaaaccctttggggtgtttgaggatgaggacgaactcaac
cacagactcgcagttcttgggaaattgaatacatttgtcaaggaatggattgccgagata
agtgaaacaaagaacctcccaccatcggcgataaccaatgtagggggaaagatcttcacc
tttgggtcttaccggcttggagttcacactaaaggggcggatattgatgccttgtgtgta
tcgccgcgacacgtggagaggacagacttcttcgactcattctttgcaaagctcaaactg
cacgaagagatcaaagacctacgggcggtggaggatgcctttgtacctgtgatcaaattc
aagtttgacggcatcgagattgacctgctgtttgcgcggctggctctgcagtccatccca
gacaacctggatctgagaggagactcccacctgaggaacctggacatccgctgcatccgc
agcctcaatggctgcagagtgacagatgagatcctgtacttggtaccaaacaaggagaac
ttcagactaaccctgagggccatcaagctgtgggccaaacgccgtgggatctactccaac
atgttgggcttcctgggtggagtctcctgggccatgctggtagccaggacctgccagctc
taccccaacgctgtggctgccactctcgtacacaagttcttcctcgtcttctccaaatgg
gaatggccgaatcctgtgcttttgaaacagcctgaagacagcaatctgaatctacctgtt
tgggatccacgagtgaacccgtcagacaggtaccacctgatgcccatcatcacgccagcc
tacccccagcagaactccacctacaacgtctccacttccacacgcaccatcatgagtgag
gagttcaaatacggtctcagtgtcacagatgacatccttcaggggaaaaccgactggtcc
aaactgttccagccgcccaactttttcctcaagtacaagcattatattgttctgactgcc
agtgcatccacagaagaaaaccaattagaatggatcggtctggtggagtctaagatccgt
gtcctggtggggaacctggagaggaacgagtacatcaccctggcacacgtcagccccacg
tccttccccgggaacaaggagagctgtagcgagaacgagtttgtctccatgtggttcatt
gggatcatcttcaagaaagtggagaacgcagagagcgtcaacatcgacctgacctacgac
atccagtccttcacagatacagtttacaggcaggccaacaacatcaacatgctgaaggat
gggatgaagatcgaagcaacgcacgtgaagaagaagcagctccaccagtaccttcctgtt
gagctggtgcagaggaagaagaggagcatagtggagctgaaccgtaactccaacggcggg
agttccaagcgttcctctcttgatggcagtcagctggacagttccagagactcagactcc
gggactcccttcagctcgcccagctccgtctgcaagccgtccaggccggccgcctcagac
acagacgacagtttgacaccccccaagccgccagtctctctgtttgtggagatcagctcc
tcagtgccagacgtctctccacccaggaccaatcaggagcagggtttgtccatccccgtc
attggatcaaagtccaagccctctgccccaacgggcccagtcggtagaaccattcctaca
gtagtgggtaggagcgtggtctctctccctggcagcaccagctctacagagcagaaccag
aacggagccaacagactccactcccctacactggaggatcagtccaagagactgaaagac
ggtgcagagccgctggctgatgtcttgaccttcaaggagccataccctccgtctggcgac
ggcagggagcaaggggacggagtcaaagtggtgagttctccagcaggcagcaccattcct
acagtagtaggcaggagcgttgtaccctgcctggactcctctagagataccaccagcccg
acagagcagaaccagaacggagccaccgctgcagccaagagacctcactcccccacacag
gacggatcccccaagaggatacgagacactgcagatctgctggtgtccggtgatgactct
gcattcaaggagccgttccctctatctagcgacggccaggagcaaggggacggagtgaac
gtcgaaagtcttggtggggtaaaggctatgcctattccaactatcgacacatcaagaaca
cagagacttcccagtatggagctgccagatgtgacctcccccctccccagcagtaaccac
cagcgggtggttaagaactccatcagactagccctcaacaggcacaggtaa
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