Salmo trutta (river trout): 115193496
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Entry
115193496 CDS
T08542
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03008
Ribosome biogenesis in eukaryotes
stru03013
Nucleocytoplasmic transport
stru03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115193496
03008 Ribosome biogenesis in eukaryotes
115193496
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115193496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115193496
03009 Ribosome biogenesis [BR:
stru03009
]
115193496
03016 Transfer RNA biogenesis [BR:
stru03016
]
115193496
03036 Chromosome and associated proteins [BR:
stru03036
]
115193496
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
115193496
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
115193496
Pre-60S particles
115193496
Transfer RNA biogenesis [BR:
stru03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
115193496
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
115193496
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
BspA_v
Rap1a
Hydrolase_3
Motif
Other DBs
NCBI-GeneID:
115193496
NCBI-ProteinID:
XP_029608042
LinkDB
All DBs
Position
5:complement(1354714..1445570)
Genome browser
AA seq
1075 aa
AA seq
DB search
MKSSMPAVMTVLADHAAQQLLDFSQKLDINLLDNVVNCLYHGVGTQQRMAQEVLTQLKEH
PDAWTRVDTILEFSQSMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSD
ATMVEKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSE
EVFDFSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWI
PLGYIFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVNLFTLTMCQLKQ
MLPLNTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLMEALHYMLL
VSEVEETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRQLYLPVLSKV
RLLMVSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIM
TEKLHNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDN
KAIIASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCR
RHFVQVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHIIEK
YMLLPNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLD
MLNVYKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSSDPQMVGENF
VPPLLDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPQIFDAVFECTLNMINK
DFEEYPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQI
LYTLLQNVTQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILTYMFNLVEEG
KINTQLNPSNPSNNQVFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIAAFKEHLR
DFLVQIKEFAGEDTTDLFLEEREASLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgaagagctctatgccagcagttatgacagtgttagcagaccatgcagcgcagcagctg
ctggacttcagccagaaactagacatcaacctgttggacaacgtggtcaactgtctgtac
cacggggtcggaacacagcaaaggatggctcaggaggttctgacccagctgaaagagcac
ccggatgcttggaccagagtggacaccatactggagttctcccagagtatgaacaccaaa
tactatgctctgcagattctggaaacggttatcaaaacaagatggaagattctacccaga
aaccagtgtgaaggtattaaaaagtatgttgttggacttattatcaagacatcgtcggac
gccacaatggtggagaaagagaaagtttacattggaaagctgaacatgatccttgtgcag
atcctgaagcaggagtggcccaagcactggcccacgttcatcagtgacatcgtgggagcc
agccgcaccagcgagagcctctgtcagaacaacatgatcatcctcaagctgctcagtgag
gaggtgtttgacttctctagcggacagatgacccaggtcaaggccaagcacctcaaagac
agcatgtgtaacgaattctcccagatattccagctctgccagtttgtcatggagaattcc
cagaatgcaccactggtccacgccactctagaaacgctgctgaggtttctcaactggatt
cctctggggtacatttttgagaccaaactcatcagcacactcgtctacaagttcctgaac
gtgccgatgtttcgcaacgtgacgctgaagtgtctgacggagatcgccggcgtcagtgtc
agccaatacgaggagcagtttgtcaacctcttcacactcaccatgtgtcaactcaaacag
atgcttcccctgaacaccaacattcgtctggcgtattccaacggtaaagatgacgagcag
aacttcatccagaacctcagcctgttcctctgcacgttccttaaggaacacggacagctc
atcgagaagaggcccaacctccgagagacgctcatggaggctctccactacatgctgctg
gtgtctgaggtagaggagacagagatctttaagatctgtctggagtactggaaccacctg
gctgcagagctttacagggagagtcccttctccacctccacctcccccctactgtctgga
tcacaacactttgatgtccctcctcgcagacagctctacctgcctgtactctccaaggtg
cgtctgctgatggtgagccgcatggccaagccggaggaggtgctggtggtggagaatgac
cagggagaggtggtacgagagttcatgaaggatacagactccatcaacctctacaagaac
atgagagagacactggtgtacctgacccatctggactatgcagacactgagcgtataatg
acagagaagcttcataaccaggtgaacggtacagagtggtcctggaagaacctcaacaca
ctgtgctgggctatagggtccatcagtggagccatgcatgaagaggacgagaagaggttc
ctggttaccgtcatcaaggatctgctgggtctgtgtgaacagaagagggggaaggacaat
aaggccatcattgcctccaatatcatgtacatcgtgggccagtaccctcgcttcctcaga
gcccactggaagttcctcaagactgtcgtcaataaactctttgagttcatgcacgagacc
catgatggggtacaggatatggcgtgtgacactttcatcaagatcgcccagaagtgccgt
cgccattttgtccaggtgcaggtgggcgaggtgatgcccttcatcgacgagatcctcaac
aacatcaacaccatcatctgtgacctgcagccacaacaggttcatacgttctacgaggcc
gtggggtatatgatcggagcccagacagaccaggcagtacaagagcatatcatagagaaa
tacatgttactacctaaccaggtgtgggacagcatcattcaacaggccaccaagaacgtg
gacattctgaaggacccagagacagtgaagcagctaggcagcatcctgaagaccaacgtc
cgggcttgtaaggccgtgggacaccccttcgttatccagttaggacgcatttatctggac
atgctcaacgtctacaagtgcctcagcgaaaacatctccgcagccatccagaccaacgga
gagatggtgacgaaacagcccctgatcagaagtatgaggacggtgaaaagagagacgctg
aaactcatctccggctgggttagcagatccagcgatccacagatggtgggggagaacttt
gttccgccgctgctcgacgccgttctcatcgactaccagcgcaacgtccccgccgcccgg
gagcccgaggtcctcagcaccatggcaaccatcgtcaacaagctgggcggacacatcacc
ggggagatcccgcagatcttcgatgccgtgttcgaatgtacgctcaacatgatcaataaa
gactttgaggagtacccggaacacaggactcatttcttctacctgctgcaggcggtcaac
tcccactgtttcccagcattcctggccatccctccggcccagttcaaactggtgctggac
tccatcatctgggccttcaaacacaccatgaggaacgtggccgacaccggtcttcagatc
ctctacactctactgcagaacgtgactcaggaagaggctgcagcacagagcttctatcag
acatacttctgtgacatcctccaacacatcttctctgtggtcactgacacatcacacact
gctggcctgacgatgcatgcctccatcctgacctacatgtttaacctggtggaggaaggg
aagatcaacacccagctcaacccctccaaccccagcaacaaccaggtcttcatacaggag
tacgtggccaacctgctcaaaactgctttcccacatctacaggatgcccaggtcaaggtg
tttgtaacaggactgttcagtctaaaccaggatattgcagccttcaaggaacacctgagg
gacttcctggtacagattaaggagtttgcaggggaggacaccacagacctgttcctggag
gagcgggaggcgtcgctgcgtcaggcgcaggaggagaaacacaagctgcagatgtcagtt
cctggtatcctcaacccacatgaaatacctgaggagatgtgtgattga
DBGET
integrated database retrieval system
