Salmo trutta (river trout): 115193532
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Entry
115193532 CDS
T08542
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stru03016
]
115193532
03036 Chromosome and associated proteins [BR:
stru03036
]
115193532
Enzymes [BR:
stru01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
115193532
Transfer RNA biogenesis [BR:
stru03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
115193532
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
115193532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
115193532
NCBI-ProteinID:
XP_029608104
Ensembl:
ENSSTUG00000021842
LinkDB
All DBs
Position
5:4316155..4374853
Genome browser
AA seq
1658 aa
AA seq
DB search
MSSILINALLSSCHDPDTLFNTLCWPTDSWPDTERVEALTTFIDGIGKLPQSDDGDTDKV
AFSTTKRDIFLPKVESIIWTQCLPLLLKVSDGDGACKGKRVQDGRAEITNAVCRLLSVCI
NTLCDTAVSGRVARTVLPSFQLPDGDTEEEHPGQGEGRLGIDVAIEAMSVILPTLSSDEE
LTTSILSSALSCIKTLSDALVSKITVRLIFTLLNCYSEERIASTLQFILQDLCSWHKSDS
SNTTSPVVTGRTLLCLTALSDYLFSPAKLQQHTLPQSLSCTRPDPRRSLQFWRILQDGLT
HRDNVSRKRALYLLKRCVALSEDEALEFPSSSVSSEDNEEIIFRWAPDRSKLLREFWEDY
ALVMETLEENQIHVVRPVLNRIHTLIQTAANDSQGVSLFHPSWLLGVYQRMFHSENKSVM
REGVDHLLELQVLRRPAFALAFSQFIVGPFMDVMSESSLFHRTAGQSVGECPELGVKLQV
FMVTFFSSLPQENRGPVLLQLVQRLGSQHWCAVPVLFLSRALSHLPPCPLLGPDGLQALR
EVLRCTMITHQVLLRGAAQCFLLNTTLSLTDVTSVTFDDVFSLLVHFRADESLRRGTPLW
NQLCDWLADSEGSFIPCDRESADGTSTSTSPERETVRGYVQHQMEFFLRVPAGADQTDSV
PDPGEAELLAKAILLCVDIEGRTQRRSGGEETAGVSGGMDSLFRPLLDTLSRLHTNVYLP
LRKTDKSLQLLLRLLQLTPARHPAAVEKEQEDSVTVSMEVLVLGVVEPIQEFILRRLSGE
LQELCDVERAELYLSVLKEVVLMYSVLEWNHSKVQEAYFPRLLRYVLRILEADQIPSVAG
QVSRAVAMASLAMTCEVAALGVFNLQSESTILLAHLSSYFYSPAPPPAPPLSLVHFNQSL
LKPPTVDQSTGVSEQGPLLQDWGRMAAHFIRDQWTCLGYGRRIGPPGPLELPRASGSLEA
AIEALSLLPSGLVLPVLDFMASMLPQVALSEEALCVEAVTVSWKLVLGLSSNPHDFWPTL
QGFVTMAFHHSLLELTVDQAPGLTVTLQQIAVELMELSQAKTGVFNLLIQHCCHTWLPSD
PGSEGQRQSDAMFSSALLHPDILAEACVYGPVFRRDQRLIQEVQVFVERLGEKCAANTAV
PSDNRDDQFPRVCVVAFLSRLQPSNQLHERLMEELVLRLLKKDEAISKSKQRYYSNSLQH
RVKNRVWQTLLMLLPKLRGEFVGTILGRVFEAGFVSNQASVKYLIEWKMVLILVQYPEHI
DRLWTCFRVDQEKTKTSICTFLSVLVHLNIIMPQLKEKAVQWRKALDVILQWCFSHNFSV
RLYALLALKRVWGLEGARAEAEEGAGGLGGLATVVKACLHQAEAMQSTGNASKNWTRIQD
HFFFGVFHPVRDYSVETIFYTFPSLSEVFEDEWIPPWKFEKLVDFSQSASLPLRNPVPDL
SQIQPGDWIQQDKGDQDGEERWAEVQKKMTPWRLGIQEQGPELGLVPQQRAARLGKLHSA
LLVVASLIDKPTNLGGLCRTCEIFGASGLVLDSLRHVSDKHFQALSVSSELWLPLQEVKP
VELADFLQLKKREGYCIVGVEQTANSQSLKDYRFPEKTLLLLGNEREGIPANLLQLLDVC
VEIPQQGVIRSLNVHVSAALLVWEYTRQYLPSTGVKSD
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctattttaatcaatgcccttttatcaagctgccatgatccggatactttgttt
aacacgttgtgctggccaactgactcgtggccggacacagaaagagtagaggcactgaca
acgtttattgatggaattggtaaactaccccagtctgacgatggcgacaccgacaaagtt
gccttttcaactacaaaaagagacatctttctaccaaaagttgaatcgatcatttggaca
caatgtttaccacttctcttgaaagtctctgacggagacggggcatgcaaaggtaaacgt
gtgcaagatggaagggctgaaatcaccaacgctgtgtgcaggcttctttctgtctgcatc
aacaccctgtgtgacacggcagtttctgggcgagtcgcccgcactgtcctgccatccttc
cagctgccggacggggacacagaggaagagcatcccggccagggtgagggacggctgggt
atcgacgtggctatcgaagccatgtcagtcatcctacccactctctcctccgacgaagaa
ttgaccacgtcgatcctctcatctgccctgtcctgtatcaagacgttatcggatgctctg
gtctccaaaatcaccgttcggcttattttcactctcctcaactgctacagcgaggagagg
atagcgagtacactccagttcattttacaggatttgtgtagctggcacaagagtgacagc
tcaaacacgacctcacctgtggtaacaggacgcactttgctgtgtttaacagctctctcg
gactatctcttctctccggctaaactacagcaacacacccttcctcaaagtctgagctgt
actcgacctgaccctcgtagatctctgcagttctggaggattctacaagatggattgacg
cacagagacaacgtgtcccggaagcgagcgttgtacctgctgaaaaggtgtgtcgctctg
tcagaggatgaggcgcttgagtttccaagcagttcagtgtcaagtgaagataatgaggag
atcatattcagatgggccccagacagaagcaagctgctcagagagttctgggaggactat
gccttggttatggagacactagaggagaaccagattcatgtggtccgccctgtgctcaac
agaatccatacattgatccaaacagcagcgaatgatagtcaaggcgtcagtctgttccac
ccgtcatggctgctgggtgtgtaccagcgtatgttccacagtgagaacaagtccgtcatg
agagagggagtggatcacctgctggaactccaggtgctccgacgccctgccttcgccctg
gccttctcacagtttattgtgggcccttttatggatgtgatgtctgaaagctccctcttt
cacaggactgcaggacagagtgtaggagagtgtcctgagctgggagtcaagctgcaggtc
ttcatggtcacgttcttcagcagcctgccacaggagaacagaggtcctgtgttgctgcag
cttgtccagcggctaggttctcaacactggtgtgctgtccccgtcctctttctctctcgg
gctctgtcccaccttcctccctgccctctcctgggccctgacggcctgcaagctctcagg
gaggtgctccgctgcactatgatcacccaccaggtgctactgagaggagctgcccagtgt
ttcctgctaaacactaccctctccctgacagatgtgacctcagtgacgtttgatgatgtg
tttagtttgctggtgcatttcagagcagacgagtctctacgtagaggaacaccgctctgg
aatcagctgtgtgactggctggctgacagtgaaggcagcttcataccctgtgacagagaa
tcagctgatggtaccagtaccagtacttctccagagagggagactgtgagaggctacgtc
caacaccagatggagttcttcctcagagtcccggctggcgcagaccagacagacagtgta
ccagacccaggagaggcagagctgctagccaaggccatcctactgtgtgttgacatagag
gggaggactcagaggagatctggaggagaggagactgctggtgtcagcggtgggatggac
tcgctcttccgccccctactggacacactgagcaggctccacactaatgtctacctgccg
ctacgcaagactgacaagagcctgcagctgctgctacgactactgcagctcacaccagcc
aggcatcctgctgcagtagagaaagaacaagaggacagtgtgacggtctccatggaagtg
ctggttctgggcgtggtggagcccattcaggaattcatcctccgaagactgagtggagaa
ctgcaggagctatgtgatgtagagcgtgctgagctctacctgtcagtgctgaaagaggtg
gtgctgatgtacagtgtgttagagtggaaccactccaaggtacaggaggcctatttcccc
agactcctcagatacgtcctgaggatcctagaagctgaccagatcccctctgtggcgggt
caggtgtccagggcggttgccatggcgtcgttggccatgacctgtgaggttgcagcgctg
ggagtgttcaacctccaatcagagagcacgattctactggcccatctgtctagctacttc
tactcccctgccccacccccagcccctcctctctctctggtccacttcaaccagagcctg
ctgaaacctccaactgtagatcagtctacaggtgtttcagaacagggtcctctcctccag
gactggggccgtatggcagctcatttcatccgggaccagtggacatgcctgggctacggg
aggaggataggaccacccgggcccctggagctccccagggcgtcagggtccctcgaggct
gctatagaggctctgtctctgctacccagtggcctggtactgcctgtactggacttcatg
gcctccatgttgccacaggtggcgctgtctgaggaggccctgtgtgtagaggctgtgact
gtctcctggaagctggtgctgggactcagcagtaaccctcatgacttctggcccaccctg
cagggctttgtgaccatggcctttcaccacagcctgctggagttaacagtggaccaggca
cctgggctcactgttactctacaacagatagccgttgagttgatggaactctcccaggcc
aagaccggtgtattcaaccttctgatccaacactgctgccacacctggctgccctctgac
ccaggaagtgaaggccagcgccaatcagatgccatgttctccagtgccttactgcaccct
gacatcctggctgaggcatgtgtgtatggacctgtgttcaggagggaccaaaggctgatc
caggaggtccaggtctttgtggagaggcttggagagaagtgtgctgctaacactgcagtc
cccagtgataacagggatgaccagttcccacgtgtgtgtgtcgtggcgttcctcagccgc
ctccagccctccaatcagctgcatgagagactgatggaagaactggttctccgcttgctg
aaaaaggatgaggccatatcgaagtcaaaacagcgttactatagcaactccctgcagcat
cgtgtcaagaacagggtgtggcagacactactgatgctgctgcccaaactgagaggggag
tttgtaggtaccattctgggtcgtgtgtttgaggcaggtttcgtcagtaaccaggcctca
gtcaagtacctgatagagtggaagatggttctaatcctagtccagtatcctgaacacata
gaccgactctggacctgcttcagggtggatcaagagaagaccaagaccagcatctgtacc
ttcctgtctgtgttggtccacctcaacatcatcatgcctcaactcaaggagaaggcagta
cagtggcgtaaggccctggatgttattctccagtggtgtttcagccataacttcagtgtt
cgtctgtacgccctgctggccctgaagagggtgtggggtctggagggtgcgagggccgag
gctgaggagggggccggggggctcggggggctggccaccgtcgttaaggcctgtctgcac
caggctgaggctatgcagagtactggaaatgccagtaagaactggaccaggattcaggac
cacttcttctttggtgtctttcatcctgttagagactatagtgtggaaaccatattctac
acattccccagcctatcagaggtgtttgaggacgagtggattccgccctggaagtttgag
aagttggtggacttctcccagagtgcatctctcccattgaggaaccctgtccctgacctg
agccagattcagcctggagactggattcagcaggataaaggggatcaggatggtgaggag
cgctgggccgaggtccagaagaagatgaccccctggaggttggggatccaggaacagggg
ccagagctgggtctggtgccccagcagagagcagcacgcctgggaaagctgcacagtgcc
ctcctggtggttgcctcgctcatagacaagcccaccaacctgggaggtctgtgtaggacg
tgtgagatctttggggccagtggtctggtgttggacagtcttcgccacgtcagtgataaa
cacttccaggccctgagtgtctcctctgagctatggctccccctacaggaggtgaagcct
gtagaactagctgacttcctgcagctgaagaagagggagggctactgcattgtgggagtg
gagcagacagccaatagtcagagtctaaaggactacaggttccctgagaagactctgtta
ctgctgggtaatgagcgtgagggtatcccagctaacctgctccagctgttggacgtgtgt
gtggagatccctcagcaaggtgtcatccgttccctcaacgtacacgtgagcgccgccctg
ctggtttgggagtacacccgccagtacctgccctctactggagtgaagtcagactga
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