Salmo trutta (river trout): 115193646
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Entry
115193646 CDS
T08542
Symbol
med23
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115193646 (med23)
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
115193646 (med23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
115193646
NCBI-ProteinID:
XP_029608360
Ensembl:
ENSSTUG00000013982
LinkDB
All DBs
Position
1:30083498..30118627
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AA seq
1386 aa
AA seq
DB search
MAISMETQLQSIFEDVVKTEVIEEAFAGMFMDTPEDERTKLISCLGAFRQYWSTLPPDSH
DQCVQWIVRFIHGQHSPKRISFLYDCLAMAVETSLLPPRMVCQALISSDNLEWERTQLWA
LTFRLIRKIIGGVDYKGVRDLLKALLDKIQTIPNTVSSAVVQQLLAAREVVEYILDRNAC
LLPAYFAITEIRKLYPEGMLSHWLLGSLMSDFVDSFRPTARINSICGRCSLLPVVNNSGA
ICNSWKLDPTTLRFPLRGMLPFDKDLFEPQTGLLRYVLEQPYSRDMVCNMLGLNKQTLNI
AQHKQRCPVLEDQLVDLVVYAMERSETEEQFDDGGTSQLLWQHLSSQLIFFVLFQFASFP
HMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKECIP
VPDISKPQSTHAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQSLRNKSLGMT
DYKIALLCNAYSTNSECFTLPMGVLVETIYGNGSMRITLPGTNCTASGSVTPLPMNLLDS
LTVHAKMSLIHSIATRVIKLAHAKSSIALAPALVETYSRLLVYMEIESLGIKGFISQLLP
NVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQNQLHLCVESTAL
RLITALGSSEVQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGT
WCKDILQTIMNFTPHNWASHTLSCFPAPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSM
TNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGFRYTTKVLERIGARALVAHVRTF
ADFLVYEFSTSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFII
QLLLLKPNDFRNRVSDFVKENAPEHWLQSDWHTKHMTYHKKYPEKLYFEGLAEQVNPPMQ
QQSHYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLY
NTLHYYERHLRDRTNLKRKLVHAIMSSLKDNRAPGWCLSETYIKCGMNPREDNVWIPDDT
YYCKLIGRLVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVPGKDVGNAL
LSVVLKSQPLVPRENITAWMNAIGLVITALPEPYWVVLQDRIVSVLGSPCFTTETEWVGY
PFALLDFTACHQSYSEMYCSYVLALAHAVWHHSSIGQLSLIPKFLSEVLKPIVKTEFQLL
YVYHLVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDQHSQHLSYMDPICDFLYHIKYMFT
GDSVKDQVEKIILTLRPAMKLRLRFITHTSKMEPAAASVPQPSSSVSSPAPQSNPGPSNL
PLSVAQ
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttcaatggaaacccagctccagagtatattcgaggatgtagtgaaaacagaa
gttattgaggaagcctttgcaggcatgtttatggacacacctgaggatgagagaacaaaa
cttatcagttgtctaggtgcctttcgtcagtattggagcactcttcctccggattcccat
gaccagtgtgtgcagtggattgtccgattcattcatggccagcacagccccaaacggatc
tcttttctctacgactgcctcgccatggcagtggaaaccagtctgttacctcccaggatg
gtgtgtcaggctctcataagctcagataacctggagtgggagcggacacagttatgggcc
ttgacttttcgactcatacgaaaaatcatcggtggtgtcgattacaagggagttagagat
ctactgaaggctctgctggataagattcagaccatccccaacaccgttagctcagctgtg
gtccaacagctgctagctgcacgagaggtggtggagtacatcctcgacaggaacgcgtgc
ctcctgcctgcctactttgccattacagagatcagaaaactctatcccgaggggatgttg
tcacactggcttctgggcagtctcatgtcagattttgttgacagttttcggcccactgca
agaattaactccatctgtgggagatgcagcctccttccagtggtcaacaactctggcgct
atctgcaactcctggaagctggaccccaccacattacgcttccctctcaggggcatgctg
cccttcgacaaggacctgtttgaaccacagacagggctgctgcgatatgtgctggagcag
ccctactctcgagacatggtctgcaacatgttagggctcaacaagcagaccttgaacatt
gctcagcacaagcagcgctgcccggtgctcgaggaccagctggtggacctggtggtgtac
gccatggagcgctcagagaccgaggagcagtttgacgacggcggcaccagccagctcctg
tggcagcacctctccagccagctcattttctttgtgctcttccagttcgccagcttcccg
cacatggtgctctcgcttcaccagaagctggccggtcgaggtctgatcaaaggcagagac
cacctcatgtgggtcctcctccagttcatatctggcagcattcagaagaacgccctggct
gactttctccctgtcatgaagctgttcgatcttctctacccagagaaagagtgcatcccg
gtgccggacatcagcaagccccagtcgacccacgccttcgccatgacttgcatctggatc
cacttgaaccgcaaggctcagaacgacaactccaagctgcagattcccatcccccactcc
ctcaagctgcaccatgagtttctccagcagagcctgaggaacaagtccctggggatgaca
gactataagatcgccctgctgtgtaatgcctactccactaactcggagtgcttcactctg
cccatgggcgtgcttgtggagactatctatggcaacggcagtatgcgcatcaccctgcct
ggcaccaactgtaccgcatcaggctccgtcacaccactacccatgaacctcctagactcc
ctcaccgtccacgccaagatgagcctgatccatagcatcgccactcgggtgatcaagttg
gcccacgccaagtccagcatcgccctggccccagccctggtggagacctacagcagactg
ctggtctacatggagatagaatctctgggcatcaaaggattcatcagccagctcctgccc
aacgtgttcaagtcccacgcctggggcatccttcacactctgctggagatgttcagctac
cgtatgcaccacatccagccccactaccgcgtccagctgctcagccacctgcactcgcta
gccgccgtgccccagaccaaccagaaccagctgcacctctgtgttgagagcacagcgtta
aggttgatcacagcgttggggagttccgaggttcagcctcagttcacccgcttcctcagt
gaccccaaaacggtgctgtcagctgaatctgaggagctcaaccgtgccctcatcctgact
ctggccagagccacccatgtcacagatttcttcacgggctccgactccatccagggtacg
tggtgtaaggacatcctgcagaccatcatgaactttacccctcacaactgggcttctcat
accctgagctgcttccctgctcctcttcaggcgttcttcaagcagaacaacgttccccag
gagagccgcttcaacctgaagaagaacgtggaggaggaatacaggaagtggaagagcatg
accaacgagaacgacatcatcacccacttctccatgcagggatcgccgcccctcttcctg
tgtctgctgtggaagatgctcctggagactgaccacatcaaccagatcggcttcaggtac
accacaaaagttctggagaggatcggggcacgggcgctggtggcccatgtcaggacgttt
gcagacttcctggtctatgagttctccacgtcggccggtggccagcagctcaacaagtgt
atcgagatcctcaacgacatggtgtggaagtacaacattgtcacgctggacagactcatc
ctgtgtctggccatgaggagtcacgagggtaacgaggcccaggtctgctacttcatcatt
cagctcctcctcctcaagcccaacgacttccgcaaccgtgtctctgacttcgtgaaggag
aacgcccccgagcactggctgcagagcgactggcacaccaagcacatgacctaccacaag
aaatacccggagaagctgtactttgagggcttggccgagcaggtgaacccgcccatgcag
cagcagtcccactacctgcccatctactttggtaacgtctgcctgcgcttcctgcccgtc
tttgacatcgtcatccaccgcttcctggagctgctgcccgtctccaagtccctggagacc
ttactggaccacctgggaggactctacaagttccacgaccgtccggtgacctacctgtac
aacacgctccactactacgagcgtcacctgcgcgaccgcaccaacctgaagaggaagctg
gtgcacgccatcatgagctctctgaaggacaaccgggcgccaggctggtgcctgagtgag
acctacatcaagtgtggcatgaacccccgtgaagacaacgtctggatccccgatgacacc
tactactgcaagctcatcggacgcctcgtcgacacgatggctggcaagtcccccgggccg
ttccctaactgtgactggaggttcaacgagttccccaacccggccgcccacgctctccac
gtcacctgcgtggagctgatggccctggcagtgcccggcaaggacgtgggcaacgccctg
ctcagcgtcgtcctcaagagccaaccgctggtgcctcgggagaacatcaccgcctggatg
aacgcgatcggcctggtgatcaccgccttgcctgagccttactgggtggtcctgcaggac
cgtatcgtgagtgtgctgggcagtccgtgcttcaccacagagactgagtgggtggggtac
cccttcgcgctgctggacttcaccgcctgccaccagtcctactctgagatgtactgcagc
tacgtgctggccctggcccacgccgtgtggcaccactccagcatcggacagctctccctc
atccccaagttcctgtctgaggtgctgaagcccatagtaaagacagagttccagctcctc
tatgtgtaccacctagtggggcccttcctccagcgcttccaacaggagaggacccgctgc
atgctggagattggagtggcgttctatgagatgctacaggctgtggatcagcacagtcaa
cacctgtcctacatggaccccatctgtgacttcctctaccacatcaaatacatgttcacc
ggggacagcgtcaaagaccaggtggagaaaatcatcctgaccctacgtccggccatgaag
ctccgtctgcgtttcatcacccacactagcaagatggagcctgcagctgccagtgttccc
cagccatcctcctctgtgtcctcacccgccccacagagcaaccccgggccctccaacctc
cccctgtctgtggcccagtaa
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