Salmo trutta (river trout): 115193650
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Entry
115193650 CDS
T08542
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115193650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115193650
03016 Transfer RNA biogenesis [BR:
stru03016
]
115193650
Enzymes [BR:
stru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
115193650
Messenger RNA biogenesis [BR:
stru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
115193650
Transfer RNA biogenesis [BR:
stru03016
]
Prokaryotic type
tRNA degradation factors
115193650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH_KRR1_2nd
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
115193650
NCBI-ProteinID:
XP_029608365
Ensembl:
ENSSTUG00000018258
LinkDB
All DBs
Position
5:10672057..10686055
Genome browser
AA seq
770 aa
AA seq
DB search
MKHLLRLGPTLARLNVRLCHQSVWNSRGTIQKVGVNLGEKKLEISTGKLARFADGSVVVQ
LGDTTVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNHLRRELGTTENEILTSRLI
DRAIRPLFPAGYFYDTQILCNLLAVDGVNDPDVLAINGASAALTLSDIPWNGPIGAVRIG
LVDGEFLVNPTRKQMASSTINLIVAGAPLSQVVMIEASAENVLQQDFCHAVKVGVKHTQQ
IILAIQQMAREAKVTKRTPPKIFSAPEEMIEHTRQLASEKVYAVFTDFTHDKISRDDAIN
KVRLETEEQIKEKYPHAEPYEVMESFNMVSKEVFRNLVLNEYRRCDGRNLTSLRNISCEA
DIFKPLHGSALFQRGQTQVLCSVTFDSLESSIKTDIITTALSGVKDKNFMLHYEFPPYAT
NEIGKMSGMNRRELGHGALAEKSLRPVIPKDFPFTIRVTSEVLESNGSSSMASACGGSLA
LMDAGVPITSAVAGVAIGLISKANPEKPSEIQDYRILTDILGIEDYLGDMDFKLAGTNKG
INALQADVKIPGLPLKLVMEAIQQATVAKREILGIMNNTIAKPRANRKENGPVVENVRVP
VSRRARFVGPGGYNLRRLQAQTGVTISQVDEETFSVFAPTPGAMNEAQEFITEICKDDQE
QQLEFGAVYTATIMEIRDIGVMVKLYPNMSAVLLHNSQLDHKRIKHPSAIGLEVGQQIQV
KYFGRDPTDGRMRLSRKVLQSPAATGVKTLSEKQSITMGTGNGQATSNSS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatttactgaggcttgggcccacgctggccaggctaaatgtgcggttgtgccac
caaagtgtctggaacagccgtggaacgatacaaaaagtgggtgtgaacttgggtgagaaa
aaacttgagatctcaacagggaaacttgccagatttgcagatgggtcggttgttgtgcag
cttggggatacaacagtgatggtgacagctgtcagcaaaacgaaaccgtccccctcccaa
tttatgccactagtggtggactacagacagaaagcagctgctgctggtagaatccccact
aaccacttgcggcgggagttgggcaccactgaaaatgagattctgactagtagactaata
gacagggcaatcagacccctttttcctgctggttatttctatgacactcagatcctgtgt
aacctgttggcagttgatggtgttaatgatccagatgtactggctatcaatggagcctct
gctgcccttaccctttctgacattccctggaatgggcccattggtgcagtgcgcattggc
ctggtggatggcgagttcctggtgaacccaacacgaaagcaaatggcttccagcactatc
aatctgatagtggctggagcacctctcagccaagtggtgatgatcgaggcatctgctgag
aatgtgttgcagcaggacttctgtcatgcagtcaaggttggcgtgaagcacacacagcag
atcatattggctattcagcagatggccagagaagcgaaagtgaccaagcgcacccctccc
aaaatattttctgcgcccgaggaaatgattgagcacacacgacaattggcctctgaaaag
gtctatgctgttttcacggacttcactcatgacaagatttctagagatgacgccattaac
aaagtgcgactagaaaccgaggaacaaataaaagagaaatatcctcatgcagaaccttat
gaggtgatggaatcattcaacatggtgtccaaagaggtcttccgcaatctggttttgaat
gaatataggaggtgtgatggaagaaacctgacttcattaagaaatatttcctgtgaggca
gacatctttaagccccttcatgggtctgcacttttccagaggggacagacacaggttctg
tgctctgtaacatttgactccttggagtccagtattaaaacagacatcattactacagca
ttaagtggagtcaaagacaagaatttcatgcttcactatgagtttcctccttacgcaacc
aatgagattggaaagatgagtggaatgaacagaagagagcttggtcatggggcactggcg
gagaagtctttgagacctgtcatcccaaaagacttccctttcactattagagtcacctct
gaggttttggagtctaatggttcctcgtcgatggcgtcagcatgtggaggcagtctggct
ttgatggatgctggtgtgcctattacatcagctgtggcaggtgtagctattggactcatc
tccaaggcaaacccagagaagccatcggaaatccaggactaccgaatactgactgatatt
ctgggaattgaggattacctaggagacatggacttcaaactggctggaacaaataagggt
atcaatgccttacaggctgatgtgaagattccagggttacctctgaaacttgtaatggag
gctattcaacaagccacagttgccaagagggagattttgggcatcatgaacaataccatt
gccaagcccagggctaacagaaaggagaatggtccggttgtcgaaaatgtcagagtccca
gtctccagacgagcacgctttgttgggccagggggctataacctccgcagactacaagct
caaacaggtgtgacgataagccaggtggatgaggagaccttctctgtgtttgcacctact
cctggtgccatgaatgaagcccaggagttcatcacagaaatctgcaaagatgaccaagag
cagcagctggagtttggtgctgtttacactgccactatcatggaaataagggacattggt
gtcatggtgaagctgtatcccaatatgagtgctgttctgctccataactctcagctggac
cacaaacggataaaacacccaagtgctattggattagaggttggacaacagattcaggtt
aaatactttgggcgagacccaacagatggaagaatgaggctttcaaggaaggtgttacaa
tctccagcagcaacaggtgttaagacactgagtgagaaacagagcatcaccatgggcaca
gggaatggccaagcaaccagcaactcgtcttga
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