Salmo trutta (river trout): 115193727
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Entry
115193727 CDS
T08542
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
stru
Salmo trutta (river trout)
Pathway
stru03015
mRNA surveillance pathway
stru04261
Adrenergic signaling in cardiomyocytes
stru04382
Cornified envelope formation
stru04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115193727
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115193727
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
115193727
09158 Development and regeneration
04382 Cornified envelope formation
115193727
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115193727
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115193727
03036 Chromosome and associated proteins [BR:
stru03036
]
115193727
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
115193727
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
115193727
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
115193727
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT140_1st
DSE1_N
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
115193727
NCBI-ProteinID:
XP_029608540
Ensembl:
ENSSTUG00000017239
LinkDB
All DBs
Position
5:15668297..15673334
Genome browser
AA seq
447 aa
AA seq
DB search
MAGVAGGNDFQWCFSQVKGAIDEDVAEADIISTVEFNHSGELLATGDKGGRVVIFQHEQE
CKNRPHLRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNSAHFLLSTNDKTIK
LWKIGERDKRAEGYNLKDEDGRLRDPFRITSLRVPVLMPMDLMVEASPRRVFANAHTYHI
NSISVNSDHQTYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAECHPNQCN
VFVYSSSKGTIRLCDMRTAALCDRHTKFFEEPEDPSSRSFFSEIISSISDVKFSHSGRYM
MTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSAIMTG
SYNNFFRMFDRNTRKDITLEASRESSKPRATLKPRKVSTGGKRKKDEISVDSLDFNKKIL
HTAWHPKENVIAVAATNNLYIFQDKIN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagttgccggtggaaatgattttcagtggtgtttctcacaagtgaagggggcg
atagatgaagatgttgcagaagctgatatcatctcaacggttgaattcaaccattctgga
gagttgctagcaactggagacaagggaggcagagttgtcatatttcaacatgaacaggag
tgtaaaaatcgaccacacctgcgaggggaatacaatgtttatagcacttttcagagtcac
gaacctgaatttgactacttgaaaagtttagaaattgaggaaaaaattaacaaaataaga
tggttaccccaacaaaactcagctcactttctactctcaacaaatgataaaactatcaaa
ttgtggaaaatcggtgaacgagacaagcgagctgagggttacaacttgaaagacgaagac
ggacgtctcagggatccctttagaattacctccctacgggtaccagtgctgatgcccatg
gatctcatggtagaagcaagtcctcgtagggtgtttgccaacgctcacacgtatcatatt
aattcaatttctgtaaatagcgatcatcaaacatacctctctgctgatgatctaagaatt
aatctatggcacttggaaatcacagaccgaagttttaacattgtagacatcaagcctgcc
aacatggaggaactgacagaggtgatcacagcggctgagtgccatccaaaccaatgcaat
gtatttgtgtacagcagtagcaaaggcaccatacgcctctgtgatatgcgaacagcagca
ctctgcgataggcacaccaagttctttgaggagcctgaggatccaagcagcaggtcattt
ttctctgagatcatctcgtccatctctgacgtgaagttcagtcacagcgggcgctacatg
atgacacgggactacctctccgtcaaggtgtgggacctcaacatggagaacaggccagtc
gagacatatcaggttcacgaataccttcgcagcaagctttgctcgttatatgaaaatgat
tgcatcttcgacaagtttgagtgctgctggaacggtagcgacagtgccatcatgaccggc
tcttacaacaactttttccggatgtttgaccgcaacaccaggaaggacatcacactggag
gcctctagggagagcagcaaaccgcgggctacactcaaaccccgcaaagtctccaccggt
ggcaagaggaagaaagacgaaattagcgtggacagcctggacttcaacaagaagatcctg
cacaccgcctggcaccccaaagaaaacgtaatcgccgtggcagccaccaacaacctgtac
attttccaggacaagatcaactaa
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