Salmo trutta (river trout): 115193734
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Entry
115193734 CDS
T08542
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115193734
Membrane trafficking [BR:
stru04131
]
Endocytosis
Others
Others
115193734
Endosome - Lysosome transport
115193734
Endosome - Golgi transport
115193734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
GBP_PSP
Motif
Other DBs
NCBI-GeneID:
115193734
NCBI-ProteinID:
XP_029608549
Ensembl:
ENSSTUG00000018293
LinkDB
All DBs
Position
5:complement(15898522..15930992)
Genome browser
AA seq
1010 aa
AA seq
DB search
MVILTLTKQYDFNLGAFTESSLWRSVDYGSTYIKLNKKVGSTLACLYVCPTNKRKIMMLS
DPELEQSVLISSDEGANFEKYPINFYMDGLLFHPTQENWLLASSPDNKVYSTMDFGRKWQ
LVSENVTPGRFFWAQTGLDREADVVHMETHIAKGRAQYVKCRAQRCTESNRQYLFPGFID
KNSLVVQDNYVFVQVTKSGQASYFVSYMRESFKRIQLPKYCLPKDMHIISTNEKQVFSAV
QEWNQNDTYSLYISDSPGVYFTLSLENLRTRREPGGNLLVDLYKVEGINGIFLANKLVGH
EVKTFITYNKGQTWALLQAPNTDVAGNSLHCILPFCSLHLHLDTPVNPYLPGRIFSMDSA
PGIIVATGNIGTELSSTNLGMFITSDAGNSWRQIFEEELGVWFLDNGGALVAVSLVATVP
IRHVWVSLDEGKKWDRHSFSLAPLFLDGVLMQPENHIITFTGHLSRVSEWQLIKIDYKAI
FSRRCMDGDYQTWHLHNKGEPCVMGEKQTFMKRRPGNRCMLAQDYSRVISSEPCICRTYD
FECDYGYERQADGKCTPAFWFNPSTVTRSCSTSHNYLNSTGYRKVLSNNCKEGGKDVYSP
RKQHCSPRPPRGLRLTTSQGELTATVGSNVTFLVYLDDGNSLWTYIQLDFGDGITFMYNL
SRRGDGIKHSYREDGIFRVTAHAENSQGYDISSMFLHITSPVERVYLSAPIVAIRKKEAN
LTAVVWPVHHRTLTFFWWFENSSEPLITLDGSISYTFWKEGMNRIMVQVSSGCNILQDTK
VIIVKDFFKSLLLSFSPALDEHNPDIPEWREDVGRVVRTAVSQVSGFPEERLLVSLFPGV
PTTAELFILPETQLPEHGKQNKEDLVSISNLVINALNQGLVQFELKADTQIIVYITQLTL
APLVYSNPIHSSSVMLMLLSVAFVGLAAFFIFKLKRKIPWIHVQAEENQEKESEMIGTVG
QNNTMSKMKLSEFPTEKELMEKELKTRSRGEYRRNGERVITREFPTCTNV
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcctgaccttgacgaagcagtatgactttaacttgggtgctttcactgagagt
tctctgtggagatcagtggactatgggagcacttatataaaactgaataaaaaggttggg
tcaaccttggcttgcctatacgtctgcccaaccaacaagagaaagataatgatgcttagc
gacccagagctggagcaaagtgtactcatcagctcggatgaaggtgccaacttcgagaag
tatcccattaacttttacatggacggtctgctgtttcatccaactcaggaaaactggctg
ctggctagcagtcctgacaacaaggtgtacagcacaatggattttggaagaaaatggcag
ttggttagtgagaatgtaactcctggccggttcttctgggcacaaactggtctagacaga
gaggcagatgtggtccacatggagacccacatcgccaaaggacgtgctcagtatgttaag
tgcagagctcaacgatgcacagaatcaaacagacaatacctgttcccgggattcatagac
aaaaattctctggttgttcaggacaactatgtgtttgttcaggttaccaagtcagggcag
gcgagttactttgtgtcctatatgagggaatcatttaaacgaattcagctacccaagtac
tgtcttcctaaggacatgcacatcatcagtacaaatgagaagcaggtgttttctgctgta
caggagtggaaccagaatgacacctacagcctgtatatctcagactctccaggggtctac
ttcactctgtctctagagaacctccggaccagaagagagccgggcggaaatttactggtc
gacctgtataaggtagaaggaataaatggcatatttctagccaacaaattggtgggccat
gaagtgaagacattcatcacctataacaagggtcagacctgggccctgctgcaagccccc
aacactgatgtggctggaaacagtctgcactgcatcctgccattttgttctctgcatctg
cacctggatacgccagtgaatccttacctgcctggacgcatcttcagcatggactcagca
cctgggatcattgtagctacaggcaacattggtacagagctgtcctccactaaccttgga
atgtttataacatctgatgctggaaatagctggagacagatttttgaagaagaactcggt
gtttggtttcttgacaatggaggtgctttagttgcagtttctttagttgcaacagtaccc
atccggcacgtatgggtaagtctggacgagggtaagaaatgggatcgccacagtttctct
ctggctcctttgtttctggatggagttctcatgcagccagagaatcacatcatcactttc
actggacacttaagccgtgtttcagaatggcagctgataaagattgactacaaagccatc
tttagcaggagatgcatggacggagattatcagacttggcacctacataacaagggagag
ccctgtgtgatgggagagaagcagacctttatgaaacggaggccgggtaaccgctgtatg
ctggcccaggactactcccgagtcatatcctcagaaccatgcatctgcaggacatatgat
tttgaatgtgattatgggtatgaacgtcaagccgatggaaagtgtacccctgctttttgg
ttcaacccaagcactgtgacaagaagctgtagcactagccataactacctcaacagcaca
gggtacagaaaggttttgtccaataattgcaaagagggagggaaggatgtgtactccccc
aggaaacagcattgttcccccaggcctcccagaggcctcagactgactaccagccaggga
gagctcaccgccaccgtgggcagtaatgtcaccttcctggtgtatctggatgatggaaac
tcgttgtggacttatatccagctagactttggggacggcatcacgttcatgtacaacctg
agccggagaggcgatggaatcaaacacagctatagagaagatgggatcttcagagtgaca
gcacatgcagagaacagccagggttatgacatcagctccatgttcctacacatcaccagc
ccagtggagcgtgtgtatctctcagctcctattgttgccatcaggaagaaagaagctaac
ctaacggctgtggtctggcctgtccaccacagaacactcaccttcttctggtggtttgaa
aacagctccgagcccttaataaccttggatggaagcatctcgtacacgttttggaaggag
ggcatgaacaggatcatggtccaagtgtcttctgggtgcaacatactgcaggataccaag
gtcatcattgtcaaagatttcttcaaatccctgctgttatcgttctctccggctttggac
gagcacaaccctgacatcccggagtggagagaggacgtgggccgcgtggtgaggacagct
gtatcacaggtttctggatttccagaggaacggctgttggtatcgttgtttccaggtgtt
ccaacaacagcagaactatttatcctgcctgagacacagttgcctgaacatgggaagcag
aacaaagaggacttagtgagtatatcaaaccttgttataaatgccctgaaccaaggattg
gtccagtttgagttgaaagctgacactcaaataattgtttacatcacacagctaactttg
gcacctctggtttactccaaccctattcacagtagctcagtcatgctgatgttgctatct
gtggcgtttgttggtttagctgcgttcttcatcttcaagttgaaaaggaaaatcccttgg
atccatgtccaggctgaggagaaccaggaaaaggagtcggagatgattggcacggtcggg
cagaacaataccatgtccaagatgaagctcagtgagttccccacagagaaggaactcatg
gagaaagaattgaagaccaggagcagaggagaatatagaagaaatggggagagagtgatc
acaagagaatttcctacttgtactaatgtctaa
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