Salmo trutta (river trout): 115193740
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Entry
115193740 CDS
T08542
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X1
KO
K24223
cilia- and flagella-associated protein 43
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115193740 (cfap43)
Cilium and associated proteins [BR:
stru03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
115193740 (cfap43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML
WD40
WD40_Prp19
Beta-prop_HPS5
CFAP43_N
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
115193740
NCBI-ProteinID:
XP_029608559
Ensembl:
ENSSTUG00000018860
LinkDB
All DBs
Position
5:complement(16295725..16313533)
Genome browser
AA seq
1687 aa
AA seq
DB search
MLAVSCLAQLRLFSIFPEMDVLGNLEVRWAQGLTSQNVEFVDKKTACYICGNYIVFLNIE
TKIRSVLQCPGRGIGAFTANGHCRTLAFSNHKLNPSIFVYNYPELILKNELKGTAHVDYT
SLALSDAGPYLACCSSIPDHTITVWNWETGDPICNQPQAGKDITTLVFNPMNWLQICSLS
ASSSLTIWNIEKSDSFHIMKPGVIDLPATDGCLVEKEINPSHVPTGILTYFGPQMPTSAI
AGLAEDKAETFVPKERIKTRLRPSTICWTDSSELYVGCQEGHLLQVDPDSLAVSVLFNPS
AADDIPEFQQGSFQSLALHKDGLFVSGKENVLRCLKIKGNQVEVTQTWTLEEPATTIIYS
PDYETLLLASSTGRIYRYKRSQCEKVVKVLDVLSGDFVAAASLYTDNNLCVSVRDSGELQ
LWSLDAGFCIGSISLQVKVTSLACCPIAQYVAVGTVSGHVLFIELTREQQPRLVHRVHLY
YTPVDHLLFDQGGNFLITGASDANIYVLNARASRVFEVIGYTVLFSPGAKGAIVSLSTQY
SRDIKQVKLLALCAGEKDIGRGEGSLLTLLTLPVQELTGAGVCADLRGCLSNNVLQRCTY
EVPHALSSSALGANKIFGYCQKKKALQRFQLPESTERSSDQEVVQLTPEKEVEGHPMGPA
SVLLSPHQSWLASVGQDGLLRIREISSLDRYVQMQCHSCWLGGVRTVSFTSDSQTMITTG
LKDGSMVCTRLRLKMAGVGKANAATQYSQSIAKYQESVITSENPILSRMADWDPEALSLP
GSADLHRAEANDKRQIVDVTEKDESSTNLPSATDSTWLDNKLEAVINEEIQQFSQTKKSL
RKNIKQLRDTIQAMMRENETLPDMEKLEQQEFNLDVDEQKRLQAEGEQEVTRVRNEIELE
NLAKCYLRDVLKRECWDSMKVKGQAIKAFHTEHEVKNYPMKERTQQELDELHRVESMRKI
ERADSNLQQEILEKKSKTTAEEEEEEEGREMESASLTGSLSAQYGGSNPYLYNQFNLHIR
EQKINQITLLQDIIYKVKTAFNTDFKGVHKQKVQEINRVKDKNRRIMEIMSELDIKRKLW
EPSLSDNEQPERALYVEDSEIHFEKYLTPEQRKKEEEKKKEEEQRRQMAKSDNIRERALD
EMMGGVLELKKEDILRVEVSQPEFIVSKPDIQWTEEEKKIYKEYEKKAKELSEEQEKYRK
TLEAEMKKLQTSIMDATQGFDETLTKLFERKVKSEMVIYQEELKITNLVHSILIEEEVLN
RERELSLKLEKNRVYKNEIGEALKKHKEDVEMFRETYDNVVAEDKLLDRGFRKEFFDVPG
HVVDQLYKLYKRRPRVQRMRTQADNSTSPFKERPLPGPVAAEGLCQMMKAMEELDAPENM
PESLDVSVWERFCLARRAKVESEQQVKVKALTLAEMQAFLQKRTDEDESARLEMKSLMDD
INGLREEKMRFRLDIMVQILIKQGQVEVENGDFIADYSDSLLLHKSVVEDLNGTIRALGE
QKIASMVECKDFRKGIIQQEWEHKRMRMQKEDLNNKARDIQMLRVSQELQEYLSETDHDN
RISKQVSTLEKTITLQEKTHQKNVLTCKKLIKQLNRQAAMKAAKNAALDEQLTNMQVTVA
ERRHICEAIAMEENHESDAEERYQEIIQRKKLVDLARAQAEEVATLRAEVERMRMKSFPA
LAQLKHN
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgttagttgtcttgcacagctccgtttattcagtatatttccagaaatggat
gtattgggaaatttagaagtcaggtgggctcagggtttgacaagccaaaatgttgaattt
gttgacaagaaaacagcctgctacatttgtgggaattacatcgttttcctgaatatagag
acgaaaattagaagtgtgctgcagtgtcctggtcgaggtattggtgccttcacagcaaat
ggacattgcaggacacttgcattctccaaccataaactaaatccctccatatttgtgtac
aactaccctgaacttattctgaagaatgaactgaagggaacagcccatgtagactacaca
tctctggcactaagtgatgctggtccttatttggcctgctgctcatcaataccagaccac
accataacagtatggaactgggaaactggggatccaatttgtaaccaaccacaagctgga
aaagacatcaccactttggtgtttaacccaatgaactggctccagatttgctctttgagt
gcgtcatcatcccttacaatttggaacattgagaagagtgacagctttcatataatgaaa
ccaggtgtgatagatctccctgcgacagatggctgtctggttgagaaggagattaaccct
tctcatgtccccactggaatactcacctacttcggacctcagatgcccacctcagccatc
gcagggcttgcagaagacaaggcagaaacctttgtgcccaaagagcgcatcaaaaccagg
ctaagacctagcaccatctgctggacagactcatcagagctctatgtgggctgtcaggaa
ggccacctgctgcaggttgacccagactctctggctgtctcagtcctcttcaacccctca
gctgcagatgacattcctgagttccagcagggtagcttccagagcttagccctacacaag
gatggactctttgtgtcaggaaaggagaatgtgctacgctgcttaaaaattaaggggaac
caagtggaggttacacaaacttggacattggaggaaccagccacaaccataatatattcg
ccagactatgaaacactgctcttagcttccagtacagggcgcatctacaggtataaacga
tcccagtgtgagaaggtggtgaaagtcctggacgttctcagtggagactttgtggcagca
gcttcactgtacactgataataacttatgcgtgtcagtgagggactcaggagagttgcag
ctgtggtctctagatgctggcttctgcatcggctctatatctcttcaagtaaaggtgacc
agtttggcctgctgtccgattgctcaatacgttgccgtgggaacagtgtcggggcatgtc
ctgttcattgagctgaccagggagcagcagcctcgtctggtgcacagggttcacctctac
tacactcctgtggaccacctactttttgatcaaggaggaaacttccttatcactggtgcc
tcggatgcaaatatatatgtgttgaatgcaagggcttccagagtatttgaggtaatcgga
tacacagtgttgttctctccaggtgctaaaggagccatcgtgtccctgtctacccagtac
agccgggacattaagcaggtcaaactgctggctctgtgtgctggagagaaggacataggc
cgaggggagggaagtctgcttacactgctcactctgcctgtgcaggagctcacaggggca
ggagtgtgtgcagacctgagaggatgtctttccaataatgttctacagcggtgcacatat
gaggtccctcacgcactcagctcctctgccctgggagccaataagatctttggctactgc
caaaagaagaaagctctccagagattccagctacctgagagcacagaaaggtcctctgac
caggaagtggtccagttgaccccagagaaggaggtggaaggtcaccctatgggccccgcc
tccgtcctgctgtccccccaccagtcttggctggcctcagtgggccaagatggactgctg
cgcatccgggagatctccagtctggaccggtatgttcagatgcagtgccactcgtgttgg
ctgggaggggtgaggacagtgtcctttacctcagacagtcagacaatgatcactacaggc
ctgaaagacggctctatggtctgtacaagactaaggctgaaaatggcaggtgttggaaaa
gcgaatgcagctacacagtacagccagtctatagccaaataccaggagagtgtgataaca
tcagagaaccctattctcagtaggatggctgactgggacccagaggccctgtcccttcct
gggtcagcagatctacacagagcagaggccaatgataagcgacagatagttgatgtgacg
gaaaaggatgagagctccaccaacctgccctcagccacagactccacctggctggacaac
aagctggaagcggttatcaatgaggagatccaacagttttcacagacaaagaaaagcctg
aggaaaaatatcaaacaattgcgtgacacaatccaggcaatgatgcgtgagaatgagaca
ctgcctgacatggagaagctggagcagcaggagttcaacctggatgtagatgagcaaaag
agactgcaagccgagggggagcaggaggtcaccagggtccgaaatgagattgagttggag
aacctagccaagtgctacctgcgtgacgtccttaagagagaatgctgggattccatgaag
gtcaaagggcaagctatcaaggccttccacactgaacacgaggtgaagaactaccccatg
aaggagcggacacagcaggagctggatgaacttcatagagtggagagtatgaggaagatt
gaacgggctgacagcaatctccagcaggagattctagagaagaagagcaagaccacagcg
gaagaagaggaggaggaggaaggccgtgagatggagagtgcttccctcacaggtagcctc
agtgcccagtatggaggctcaaacccctacctctacaatcagttcaacctgcacatcaga
gagcagaagatcaaccagatcactttgctacaggacatcatctacaaagtgaagacagcc
tttaacacagactttaagggagtgcacaagcagaaggtgcaggagatcaaccgagtgaaa
gataagaatcgtcgcatcatggagatcatgtcagagctggacatcaagaggaagctgtgg
gagcccagcctgtctgacaacgagcagccagagagggcactgtatgtggaggactctgag
attcattttgaaaagtacctcaccccagagcagagaaaaaaagaagaggagaagaagaaa
gaggaggaacaaagacggcagatggccaagagtgacaatatcagagagcgagctctggat
gaaatgatgggtggagtactcgagctaaaaaaagaggatatcttgagagtggaggtgtct
cagcctgagttcattgtatctaaaccggacattcagtggacagaggaagagaaaaagatc
tataaagagtatgagaagaaagccaaagaactgagcgaggaacaggagaagtacagaaag
actctggaagctgaaatgaagaaactacagacgtccatcatggacgccactcaggggttt
gatgaaaccttgaccaagctctttgagaggaaggtgaaatctgagatggttatataccag
gaagagctgaagattacaaatctagttcattccattctgatagaggaggaggttctcaat
agagagcgagaactcagcctcaagctagaaaaaaacagggtctacaagaatgagattgga
gaagcgcttaagaagcacaaagaggatgtagaaatgttccgggagacctacgacaatgtt
gtggccgaggacaaacttctcgacaggggattcaggaaggagttctttgatgtcccaggc
catgttgttgatcagctgtacaagctatacaagcgcagacccagggtccagaggatgagg
acccaggcagacaacagtaccagcccctttaaagagcggcccctgccgggcccagtggca
gcagagggtctctgtcagatgatgaaggccatggaggagctggacgctccagagaacatg
cctgaaagcctagacgtgtctgtgtgggagaggttctgcctggcccgcagagccaaagtt
gagagtgagcagcaggtgaaagttaaggctttgactctggctgaaatgcaggcctttctg
cagaagaggaccgatgaggatgagagtgcaagactggaaatgaaaagtctcatggatgac
atcaatgggctacgagaggagaagatgcgtttccgcctggacattatggttcagatcctg
atcaagcagggccaggtggaggtggagaacggagacttcattgcagactactctgactct
ctgctgctccataagagtgtggtggaggacctcaatgggaccatcagggctctgggagag
cagaagatagccagcatggtggagtgcaaggacttccgtaagggcatcatccagcaggag
tgggagcacaagaggatgaggatgcagaaggaggacctgaacaacaaagccagggacatc
cagatgcttcgcgtctctcaggagctgcaggagtatctcagtgagacggatcatgacaac
cgcatatcaaagcaggtttcaactctggagaaaaccataacattacaggaaaagactcac
caaaagaatgtgctgacctgtaagaagttgatcaagcagctgaacagacaggcagcaatg
aaggcagcgaagaatgctgctctggatgagcagctgaccaacatgcaagtgactgtggct
gagaggagacacatctgcgaagccatagccatggaggagaaccatgagagtgatgcagag
gagagataccaggagatcatccagaggaagaagctggtggatctagccagggcccaggct
gaggaggtggctaccctcagggcagaggtggaacgcatgaggatgaagtccttccccgct
ctcgctcagctaaaacataactga
DBGET
integrated database retrieval system
