Salmo trutta (river trout): 115193791
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Entry
115193791 CDS
T08542
Symbol
fancl
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL isoform X1
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03460
Fanconi anemia pathway
stru04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115193791 (fancl)
09124 Replication and repair
03460 Fanconi anemia pathway
115193791 (fancl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115193791 (fancl)
03400 DNA repair and recombination proteins [BR:
stru03400
]
115193791 (fancl)
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115193791 (fancl)
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115193791 (fancl)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
115193791 (fancl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d1
FANCL_d2
zf-RING_2
SLX1_C
zf-rbx1
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
115193791
NCBI-ProteinID:
XP_029608647
Ensembl:
ENSSTUG00000024193
UniProt:
A0A674ACM5
LinkDB
All DBs
Position
5:18756173..18770748
Genome browser
AA seq
395 aa
AA seq
DB search
MLPWSANHIVTLAQHHTADFELSRMESLLVKESPLLLPLNKEKTVYDGFITVQERDFRIR
ILLPPDHQLKLAKLHCCWQLKQLLCGYEHIVKQRLHHSPDLVSFVLELKTVLEVALKCRP
ECRSIPPPQYYSQLIIEMEDLGWDKLVSIDTEFRTLRLRAEDSSGRQHVVTVKLKPKHPV
EAPWCSADLPVPLAMTWTPQSSLGHVHTQFLLLLESLAEFWAVLDEIDEKTWVLEPEKPS
RADTMRRIAIANNVSIKVEVDTRHPKMLPECCLLGAEHVVTPLRNKLNANMHLWNPDCSI
LQNLRDVLEIEFPSPATHEKSSFSAECGICYAYRLESAIPDQVCNDPRCGQPFHQACLYE
WLRGLPSSRQSFNIVFGECPYCSKPITVKMSTQKP
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgctaccatggtcagctaaccatattgttacgttagcccagcaccacacagctgacttc
gaactgtcaagaatggagagtttacttgtcaaagagagtccgctgttgttaccactcaac
aaggagaaaacggtctatgatggatttatcacggttcaggagagagacttcagaataaga
atactgcttccaccagatcatcaacttaaactggctaagcttcactgctgctggcagttg
aaacagctattgtgtggatatgagcatatagtaaaacagagattacatcactctcctgat
ctagtcagctttgttctggagctgaagactgtcctggaagtggccctcaagtgcaggccg
gagtgtcgctccatcccccctccacagtactactctcagctcatcattgagatggaggac
ctgggatgggataagctggtgtccattgacacggagttccgcacactgagactgagggct
gaggactcctcaggacgacagcacgtcgtcaccgtcaaactgaagcccaagcaccctgta
gaggccccatggtgctccgcagacctacctgttccactggccatgacttggacaccacag
agttctctaggccatgttcacactcagttcctgctgcttctagagtctctggctgagttt
tgggcggttctagatgagatcgatgaaaagacctgggttctagagccagagaaacccagc
agagccgacaccatgaggaggatcgccatcgcaaataacgtgtccataaaagtcgaggtt
gacacgcgacacccaaagatgttgccagagtgctgcctgcttggagcagagcatgtggta
acacctttgaggaacaagctgaatgccaacatgcatttatggaacccggactgcagcatc
ttgcagaacctccgggatgttttggagatagaattcccatcacctgccacccacgaaaaa
tctagtttcagtgcggagtgtgggatctgttacgcctaccgtctggagtcggccattcct
gatcaggtgtgcaacgaccctcgctgcggccaacccttccaccaggcctgtctgtacgag
tggttgcgtggactaccttccagtcgccagagcttcaacatagtgtttggagagtgtccc
tactgcagcaagcccatcacagtgaagatgtccacccagaaaccctga
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integrated database retrieval system
