Salmo trutta (river trout): 115193816
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Entry
115193816 CDS
T08542
Symbol
nvl
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
stru
Salmo trutta (river trout)
Pathway
stru03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115193816 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stru03009
]
115193816 (nvl)
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
115193816 (nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_2
AAA_22
AAA_14
AAA_33
TIP49
NPHP3_N
Mg_chelatase
AAA_28
RNA_helicase
nSTAND3
AAA_17
AAA_18
Rad17
IstB_IS21
TsaE
ABC_tran
NACHT
Vps4_C
Viral_helicase1
Zeta_toxin
AAA_3
nSTAND_NTPase5
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
115193816
NCBI-ProteinID:
XP_029608718
Ensembl:
ENSSTUG00000000271
LinkDB
All DBs
Position
5:complement(20029149..20039363)
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AA seq
889 aa
AA seq
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MMNNRRCGVDNRLKQRVEQYLSNQSGQYVDITSMAHELQRLYRMDYGRRNKTAFRIQVEK
IHGVICDESGLNDLENKHLAKRARHSEKDAGDGSSNLDDTTDSDEDLPEQLPINLMNNSL
MSLYKKGNPESGASPRRDKSASDSPAPEAQSTPQSVGTKVSAGGWFIDKGRGLEHDSILI
DLCEEEAACPAGNKQTDVSMLEPEKTPKKGKFKKSKRRKEGASKGNDGDIEASIMNKKAR
TKSIELQYSTLKFEDVGGNEDTLTEVCKLLIHMRHPEVYQQLGVVPPRGFLLHGPPGCGK
TLLAQAVAGEMELPMLKVSAPELVSGVSGESEQKLRELFEQAVTSSPCILFIDEIDAITP
KREVASKDMERRIVAQLLTCMDDLNSLAVTVQVMVIGATNRPDSLDPALRRAGRFDKEIC
LGIPDEAARLRILKTLCRKLKLPEDFDYRQLARLTPGYVGADLMALCREAAMSAVNRVLL
ERQDKNQGLVPMAEERAESEGPQGAGLLPQGPETFQASADTVIQEMTDLSHVPQGDKQQL
PLATETTFRGELCRLLSLLKSSESLSEEQLAGLCILMSDFQGSLASVQPSAKREGFATVP
DVTWEDVGALHDIREELTMAILAPVRSPAQFKALGLSAPAGVLLAGPPGCGKTLLAKAVA
NESGLNFISVKGPELLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSGHESG
ASVRVVNQLLTEMDGLETRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPPPSDRHA
ILLTITKGGSRPHLEQDVSLEEMAHDVRSDCFTGADLSALVREASVNALRAYLLTQPNPS
YTGHSYSNGPVADIRVSKQNFEDAFKKVRPSVSKKDQRMYEQLKESLTR
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgatgaataacagacgttgcggagtggacaaccgactcaaacagagagttgagcagtat
ttgagtaaccagagtggccagtatgttgacattacttcaatggcacacgagcttcagaga
ctctacagaatggactatggcaggcgaaacaagactgcattcaggattcaggtggaaaag
atccatggagtgatatgcgatgaatctggactgaatgatctggagaacaagcacttggcc
aagagagccagacatagtgagaaggatgctggggatggcagcagtaacttggatgacact
actgatagtgatgaggaccttcccgaacaactgcccatcaacctcatgaataactccctg
atgtccctgtacaagaaggggaacccagagagtggggcatctcccaggagggacaagtct
gcatcagacagccctgcccctgaggctcagtccacccctcagagtgttggtaccaaggtg
tctgcagggggctggttcatagacaagggcagaggcctggagcatgacagcatcctcatt
gacctgtgtgaagaggaggcagcctgtcctgcaggaaataagcagacagatgtctcaatg
cttgagcctgagaagacaccaaaaaaaggcaaatttaaaaaatctaaacggcggaaagag
ggagcgtcaaagggcaatgatggtgacatcgaggccagtatcatgaacaagaaagcgagg
accaaatccattgaactacagtattcaacattaaagtttgaagatgttggaggcaatgag
gacacattgacggaggtgtgtaagctgctgattcatatgcgtcacccagaggtgtaccag
cagttgggggtggtccctccacgggggttcctgctccatggcccccctggctgtggaaaa
accctgctggcccaggctgtggctggggagatggagctgcccatgctgaaggtgtcggcg
ccagagctggtgtctggggtgtcaggggagtctgagcagaagctgagagagctgtttgag
caggctgtgaccagctccccttgcatcctgttcattgatgagattgatgccatcactcct
aaacgagaggtggcctccaaggacatggagagacggattgttgctcagctgctcacctgc
atggatgacctgaactcattagctgtcacagtccaggtgatggttattggtgccaccaac
cggccagactctctggacccagcgctgcgccgggctggacgctttgacaaagaaatctgt
ctggggatacctgatgaagcagctcgtctcagaattctgaagaccctgtgtcggaagctg
aagctccctgaggactttgactaccggcagctggcgcgtcttaccccggggtacgtggga
gctgacctcatggcgctgtgccgcgaggccgccatgagcgccgtcaacagggtcctgctg
gagaggcaggacaagaaccaggggctggtccccatggcggaggagagagcagagtccgag
gggcctcagggcgcaggtcttctcccacagggcccagagacattccaggcctcagcagac
acagtgatccaggagatgacagaccttagccacgtaccacagggagacaagcagcagctg
cctctggctactgagacaaccttcaggggggagctgtgtcgcctgctgtccctgctgaag
agcagtgagtcgctgtctgaggagcagcttgctggcctgtgcatcctcatgtcagacttc
cagggttccctggccagcgtacaaccttctgccaagcgtgaaggcttcgccacggtgcca
gacgtcacctgggaggacgtgggggctctgcatgacatccgcgaagagctcaccatggcc
atcctggcccctgtgcgttctcctgcgcagttcaaagccctgggtctcagtgctcctgca
ggggtgttgctagctgggcctcccggttgtggaaagacactgctggccaaggctgttgcc
aatgagtcaggacttaacttcatctctgtcaaggggccagagctgctgaacatgtatgtg
ggagagagcgagcgggccgtgcgacaggtgttccagagaggacggaactctgccccttgt
gtcatcttttttgacgagatcgatgcactgtgcccccgccgctccgggcatgagtctgga
gccagtgtccgtgtggtcaaccagctgcttactgagatggacggactggagacccggcgg
caggtcttcatcatggcggctaccaacagaccagatatcattgaccctgctgtgctgaga
ccaggccgtctggacaagaccctgtatgtgggcctcccacctccatcagaccgacacgcc
atcttactcaccatcaccaaggggggcagcaggcctcatctggagcaggatgtgagtctg
gaggagatggcccatgacgtgcgcagtgactgcttcactggggcagacctgtctgcgttg
gtgagggaagcctctgtcaatgctctgagagcctacctcctgacccaacccaacccatct
tacacaggtcacagctactctaacggccctgtggccgacatccgggtcagcaagcagaac
tttgaggacgccttcaagaaagtacggccgtctgtgtctaaaaaggaccagcgtatgtac
gagcagctaaaggaatctcttacaaggtga
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