Salmo trutta (river trout): 115193958
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Entry
115193958 CDS
T08542
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
stru
Salmo trutta (river trout)
Pathway
stru04080
Neuroactive ligand-receptor interaction
stru04082
Neuroactive ligand signaling
stru04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115193958
04082 Neuroactive ligand signaling
115193958
04519 Cadherin signaling
115193958
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115193958
Ion channels [BR:
stru04040
]
Ligand-gated channels
GABA-A
115193958
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
BBL5
Motif
Other DBs
NCBI-GeneID:
115193958
NCBI-ProteinID:
XP_029608977
UniProt:
A0A673VXH6
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Position
5:25953688..26018448
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AA seq
462 aa
AA seq
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MMAVLRSGGRVFVMLLISRMLENSLLSAEVKEGEILPPTIQKLMKGYNKYLRPFFDNGPV
TVGMSLDIASIDTISEINMDYTATIFLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDTF
IVDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESW
GYNINDVMFYWTRGNESVSGLDTLRLAQYTVEDHYTSASEAIYETGHYPKLIFHFELKRS
ILYFILETYVPSSLLVVLSWVSFWISQSSVPARICIGVTTVLTMTTLMMGARTSLPNANC
FIKAIDVYLGICFSFIFGALIEYAVAHFCTLNHPDANIVMYGHQMGGFDEEMNGMVTTIA
AENNRAKRRKEKAAVDEAALAATAELVLCPSSPTGSEPKPEAPEEPPNRCLMVLVLLRKV
LRKAANCCHVENPHLIDNYSRMTFPLSFVFVNLLYWTYYLYL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgtgctccgctctggagggagagtgttcgtcatgctcctcattagcaggatg
ttggagaactcgctgctcagcgctgaagtgaaagagggagagattctgcctcccaccatt
cagaagctgatgaaaggatacaacaagtacctcaggcctttttttgacaatgggccagtg
actgtgggcatgagtttggacattgccagcattgacaccatatcagagatcaacatggac
tacacggccactatcttcctgcgtcagcgctggacagacgagcgcctggtgtttgagggt
aacaagagcctgagtctggacggcaggctggtggagctgctctgggtaccagacactttc
atcgtagactccaaaaagtccttcctccatgacatcactgtggagaacaggctgatcagg
atcttccccaatggaacggtgctctacgccctgaggatcaccaccactgtggcctgcaac
atggacctgaccaagtaccccatggacaagcagacctgcactctgcaactggagagctgg
ggctacaacatcaatgatgtgatgttctactggaccagagggaatgagtcggtcagtggt
ttggatacgctgcgtctggctcagtacacagtagaggaccactacacctctgcgtctgag
gccatctatgaaacaggccactaccccaagctgatcttccactttgagctgaagagaagc
atcctgtacttcatcctggagacgtacgttccctccagcctgctggtggtcctctcctgg
gtctctttctggatcagccagtcttctgtccccgcaaggatctgtatcggagtgaccacg
gttctgaccatgaccacgttaatgatgggtgcgaggacgtccctgcctaacgccaactgt
ttcatcaaagccattgatgtgtacctgggcatctgcttcagctttatcttcggagccctg
atcgagtacgccgtggcccacttctgcacccttaaccatcccgacgccaacattgtcatg
tacggtcaccagatgggaggctttgacgaggagatgaatggcatggtcaccactatcgcc
gctgaaaacaacagggccaagaggcgtaaggagaaagctgctgtagatgaagcggcctta
gcggccacagctgagctggtactttgcccctccagccccactggcagtgagcccaagcct
gaggcccctgaggagccccccaaccgatgcctcatggtcctggtcctcctccgcaaggtc
ctgcgcaaagctgcaaactgttgccatgtggagaatccccacttaatagacaattactcc
aggatgaccttccccctctcctttgtattcgtcaacctcctctattggacatactacctg
tacttgtaa
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