KEGG   Salmo trutta (river trout): 115194022
Entry
115194022         CDS       T08542                                 
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
  KO
K08734  DNA mismatch repair protein MLH1
Organism
stru  Salmo trutta (river trout)
Pathway
stru03430  Mismatch repair
stru03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    115194022 (mlh1)
   03460 Fanconi anemia pathway
    115194022 (mlh1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stru03400]
    115194022 (mlh1)
DNA repair and recombination proteins [BR:stru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     115194022 (mlh1)
SSDB
Motif
Pfam: Mlh1_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 115194022
NCBI-ProteinID: XP_029609121
Ensembl: ENSSTUG00000026736
LinkDB
Position
5:28731779..28742740
AA seq 725 aa
MSGVIRRLDETVVNRIAAGEVIQRPANAIKELLENCLDAKSTNIQVTVKEGGLKLIQIQD
NGTGIRKEDMEIVCERFTTSKLQTFEDLNAISTYGFRGEALASISHVAHVTITTKTADAK
CAYRATYCDGKLKTQPKPCAGNQGTQITVEDLFYNVSTRRKALKSPSEEYSRIVEVVSRY
AIHNSGKSFAVKKQGETMADVRTLPNASTLDNIRVVFGNTVSRELIEVGCEDQKLAYKLK
GHISNANYSVKKCILILFINHRLVESSALKKAIETVYAAYLPKNSHPFLYLSLEIAPHNI
DVNVHPTKHEVHFLHEDCIIESVQKHIESQLLGSNSSRTYFTQTLLPGLSVSTSEGKSSS
NSTGDSERVYAHQMVRTDSRAQKLDAFLQPASKLAPTPTANPNGQSRGEPVTTNDMEEMD
NAEILEEQVPGATDDGEGTSLNTPADLPRKRPRAGQDEEQEDLTAAATARRRAIKLSSVK
ELRDDIAEHAHKGLQEMLQNHSFVGCVNPQWTLIQHHTKLYLLNTTKLSQELFYQILIYD
FGNFGILRLSEPAPLYDLAMLALDSEESGWSEEDGPKEGLAQYIVDFLKKKSEMLEDYFS
MEIDQEGNLTGLPLLLDKYTPPMEGLPMFILRLATEVNWDNEKDCFRDFSKECSQFYSIR
KQYVLELEPGEEEQDAELNSWRWKVEHLLFKAFRSLFSPPKHFSEDGSVLQIANLPDLYK
VFERC
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgtccggggtgattcggagactcgatgagaccgttgttaatcggattgctgctggagaa
gttatccaacgtcctgcaaatgctatcaaagaattgcttgaaaactgtttagatgccaag
tccaccaacatacaggtgactgtgaaggaggggggtctgaaacttatccagatacaggac
aatggcactggcatcaggaaagaagatatggaaatagtatgtgaacggtttacaacaagc
aagctccagacttttgaggacctcaacgccatctcaacctatggtttccgaggagaggca
cttgccagtataagccatgttgcccatgtgaccataacaaccaaaacggctgacgccaag
tgtgcttacagagccacctactgtgatgggaaactaaagacccaacccaaaccctgcgct
ggaaaccaggggacacagatcactgtggaggatctgttctataacgtgtccaccaggagg
aaagccctaaagagccccagtgaggagtactccaggattgtggaggtggtgagcaggtat
gctatacacaactctgggaaaagctttgctgtcaaaaagcaaggcgagaccatggcagac
gtcaggaccctacccaacgcctccacactggataatatccgtgtggtgttcggcaataca
gtcagcagggagctgattgaagtgggctgtgaggatcagaagcttgcctataagctgaag
ggccacatctctaacgccaactactcagtgaagaagtgcatcctcatcctcttcatcaat
catcgtctggttgaatcgagtgccttaaaaaaagccattgagaccgtttatgctgcatac
cttcccaagaactctcacccatttctatatctcagcctggagattgcccctcataacatc
gacgtgaacgtccaccctaccaaacacgaggtgcacttcctccatgaagactgtatcatc
gagagcgttcaaaaacacatagagagccaactcctgggctccaactcctcgcgcacgtac
ttcacacagacattgctacctgggctgtctgtctccaccagcgaggggaagtcttcctcc
aactccacaggggacagtgagcgggtctacgcccatcagatggtcaggaccgacagtaga
gcccaaaagctggacgcctttctccagccggcatccaagctggcccctactcccaccgcc
aaccctaatgggcagagcaggggggaacctgtgaccaccaatgacatggaagagatggac
aatgcagagatcctggaggaacaggtgccaggtgccacagacgatggggagggaaccagc
ctaaatactccagctgatctccccaggaagcgtccccgtgctggtcaggatgaggagcag
gaggacctgactgctgcagccacagccaggagacgagccatcaagctgagcagtgtgaag
gagctgagagatgacatcgctgagcacgcacacaaaggtcttcaagagatgcttcagaat
cactcgtttgtgggctgtgtcaacccccagtggactctgatccagcaccataccaaactg
taccttctcaacaccaccaaactcagccaggagctattctaccaaattttgatctacgac
ttcggtaactttggcatcttgaggttatctgagcctgcaccactctatgacctggccatg
ctggctctggactccgaggagagtggctggtcggaggaggacgggcccaaggagggtctg
gcccaatacatagtcgacttcttgaagaagaaatctgagatgctggaggactacttctcc
atggagatagaccaggaaggaaatctcaccggtttgccattgctgcttgacaagtacacc
cctcctatggagggtctgcccatgttcatcctacgtttggctactgaggtgaactgggac
aatgagaaggactgcttcagagacttcagcaaggagtgcagccagttctactctatcagg
aaacagtatgtcctggagctagagccgggagaggaggagcaggatgcagagctgaactcg
tggcgttggaaggtggagcatctcctgtttaaagccttccggagcctcttcagtccccct
aaacacttcagtgaggatggcagcgtactccagattgctaacctaccagacctctacaaa
gtatttgagcgatgctaa

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