Salmo trutta (river trout): 115194063
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Entry
115194063 CDS
T08542
Name
(RefSeq) serum response factor-like isoform X1
KO
K04378
serum response factor
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115194063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115194063
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
115194063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
115194063
NCBI-ProteinID:
XP_029609242
Ensembl:
ENSSTUG00000043674
LinkDB
All DBs
Position
5:31477080..31529520
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AA seq
578 aa
AA seq
DB search
MLPSQAGSAQPGNGSASFRANTGHGSGVIGIRPVLVRARQSKTRVSDSISAVGMLGGNGP
GVGARGGARPGNGTGPTIPLTAAQGGIGLNMGIGVRGGSRYDPDKECAPMGCSGSDADSD
SGDDDDPMGSIGDNRRSVKRERLEMEAAVTGQEAGIPPGGYGVVPQGVAGAKPGKKTRGR
VKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQ
PMITSETGKALIQTCLNSPDSPPRNDPSTDQRMSATGFEETDLTYQVSESESLGETKDQL
KPVFTVANLPGTTSTHAPTAPTTSTTMQVSSGTSFPITNYLAPISASSNVNGTVLKTTGA
SGGQVMQLPSGFTFMSAGTPLPPGTPTIPLSQLHQHSLAIPGQRGQKLTASQLTQQGQQA
VFRFPAAVSLEGGMTQQLQAIQVHPTTHTNDSSSEISQTSTVSTATIVTSSVPTSMAGHM
MYTSPHTVMYASSPSAMQVSHGQGQDTGETTLDYSRLRWDTGAVPQVFLTAPSGTMQIPV
SAVQLHPMVIGQQLSSSSSNLTELQVVNLDTTQNTKND
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgctaccaagccaggctggatcagcacaacctggaaacgggtcagcgtctttcagggct
aacacaggtcacggttctggggtgattgggattcgccctgtgttggtcagagcaaggcaa
tcgaaaactcgggtcagcgacagcatcagtgcggttgggatgttggggggcaacggtcca
ggagtgggtgcaagaggtggggcgagaccagggaacgggacgggaccgacgattccactg
accgctgctcagggaggcatcggtctgaacatgggaattggggttcgcggaggcagccgg
tatgacccggacaaagagtgtgcgccaatggggtgcagtgggtcggacgctgattcggac
tcgggggatgatgacgatccgatgggttcaatcggggacaacagaagaagtgtaaagcgg
gagagactggagatggaggctgcggtgacagggcaggaggccgggataccaccggggggt
tatggtgtggtcccccaaggtgttgctggcgcaaagccagggaagaagacacgtgggcgc
gtgaagataaaaatggaattcatcgacaacaagttgaggcgatacacaacttttagcaag
aggaagactggtataatgaagaaggcctatgagctttccacgttgacaggaacccaggtc
ttgctactggtggccagcgagacgggccatgtctacacgtttgccacgcggaagctccag
cccatgatcaccagcgagacgggcaaggccctcatccagacgtgcctcaattctccagac
tcgcccccccgcaacgacccctccactgaccagcgtatgagcgccacaggcttcgaggag
acggaccttacctaccaggtgtctgagtcagagagccttggggagaccaaggaccaacta
aagcctgtgtttacagtggccaacctcccgggcaccaccagtacccacgcacctacggcc
cccaccacatccaccaccatgcaggttagcagcgggacctccttccccatcaccaactac
ctggcacctatctccgctagcagcaacgtcaatggcacagtcctcaagaccaccggtgcc
tccggagggcaggtcatgcagctgcccagcggctttaccttcatgtcagcaggcactcct
ctccctcccggcacccccaccattccgctcagccagctgcaccagcactccctggccatc
ccgggacagcggggccagaagctcaccgcatcacaactgacacagcagggccagcaggcc
gtcttccgattccccgctgcagtctccctagagggagggatgacccagcagctgcaggcc
atccaggtgcaccccaccacacacaccaacgacagcagctcggagatctcccagacctcg
actgtctccactgcgaccattgtcacgtcgtctgtgcccacgtccatggcggggcacatg
atgtacaccagcccccacacagtgatgtacgcgtccagcccctcggccatgcaggtgtcc
cacggacagggccaggacacaggtgagaccacgcttgactacagtaggctacgctgggac
acaggtgctgtccctcaggtattccttacggcaccctcaggcaccatgcagatccctgtt
tctgcagtgcagctacacccaatggtgattggtcagcagttgagcagcagcagcagtaac
ctgacagagctgcaggtggtcaacctggacaccacacagaacactaagaacgactga
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