Salmo trutta (river trout): 115194096
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Entry
115194096 CDS
T08542
Name
(RefSeq) structure-specific endonuclease subunit slx1-like
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
115194096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stru03400
]
115194096
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
115194096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
zf-HC5HC2H
T5orf172
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
115194096
NCBI-ProteinID:
XP_029609321
Ensembl:
ENSSTUG00000050214
UniProt:
A0A674EZJ7
LinkDB
All DBs
Position
5:35122497..35130653
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AA seq
262 aa
AA seq
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MVLEVESLFGVYMLYCTNPKFKGRIYIGFTVNPERRIGQHNAGRHRGGAKRTSGRGPWEM
VLIIHGFPSDIAALRFEWAWQNPHSSRRLSHVTRRSKKESSLQFHWRVVSNMLRVMPWSR
LPLTTRWLKQEYRMDFEPGLQPPLHVPLAFGSIRARKQKPKDVEEEQEKGAAICLLCQGT
VKSADKMTCFHPLCHMTSHLICLAKHFLTGEAAHLLPVEGECPGCHRSVLWGSLIRHKKG
CYGDLEENTSSSQNHWTDELQI
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggtcttggaggtagagagtttattcggggtgtacatgctgtattgcaccaatcccaaa
ttcaagggtcgcatctacattggtttcactgtgaatccagagcgtcgtataggacagcac
aacgcaggacgacaccgtggtggagccaagaggaccagtggaaggggaccttgggagatg
gttctcatcattcatggcttcccctctgacatagctgctttgaggtttgagtgggcatgg
cagaacccccactcctcccgacgcctgtcccacgtcacccggcgctcaaagaaggaatcc
agcctgcagttccactggcgtgtggtgtccaacatgttgcgggtgatgccgtggagccgc
ctgcccctcaccacccgctggctcaagcaggagtacaggatggactttgagcctggcctt
cagccgccgctgcacgtccctttggccttcggcagcatcagggccaggaaacagaaaccg
aaggatgtggaagaggaacaagagaagggtgcagctatatgcctcctttgtcaggggact
gttaagtctgcagataagatgacctgcttccatcccttatgtcacatgaccagccacctg
atttgcttagccaaacactttctgacgggtgaggccgcacatctccttcctgtggagggg
gagtgtcccggttgccatcgctcagtactgtgggggagtctgattcgccacaagaaaggc
tgttacggagacctggaggagaacacatcctcatcccaaaaccattggacagatgaactg
cagatctaa
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