Salmo trutta (river trout): 115194104 Help Entry 115194104         CDS       T08542                                  Name (RefSeq) protocadherin-7-like isoform X1   KO K16498   protocadherin delta 1 Organism stru  Salmo trutta (river trout) Pathway stru03273   Virion - Lassa virus and SFTS virus Brite KEGG Orthology (KO) [BR:stru00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03273 Virion - Lassa virus and SFTS virus     115194104  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:stru01009]     115194104   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:stru04515]     115194104 Protein phosphatases and associated proteins [BR:stru01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      115194104 Cell adhesion molecules [BR:stru04515]  Cadherins   Protocadherins    115194104 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Protocadherin Cadherin_FAT4_N Cadherin_CELSR2_9th Cadherin_2 Mid2 KIAA1549 ECSCR Motif Other DBs NCBI-GeneID:  115194104 NCBI-ProteinID:  XP_029609339 Ensembl:  ENSSTUG00000050235 LinkDB All DBs Position 5:complement(36516345..36738430) Genome browser AA seq 1258 aa AA seqDB search MRTTGAVDYICYSILILQLLNQPDAKQVLRYRLAEEGPADVRVGNVAKDLGIVAGSGEVT FTLESGSDFFKIDNITGELTTNERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVD LFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLSTATDRDFGRNGIERYELIQD SGESSRRLGSNSGGRGVDSKRFDEGAAGSSVFELQVADTTDGEKQPQLIIKGALDREQRD SYELTLRVRDGGDPPRSSQAILRVMITDVNDNSPRFEKAVYEADLPENSSPGAPILQLKA ADADVGVNGQIEYVFGAATESVRRLLRLDESSGWLSVLHRIDREEVSQLRFTVMARDRGQ PPKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGVANVAEDVVVDTPIALVQVSDRDQ GENGIVTCTVVGDVPFQLKPASEIEGEMNKKKYFLHTSAPLDYEATQEYIVVIVAVDSGS PSLASNNSLIVKVGDFNDNPPIFSQNVVEVSFPENNAPGERVTTVQAIDADSGKNAEIAY SLVSSVNGIFSIDADSGDIRVNTILDREQTERYEFKVIAKDKGMPILQGSATVVVLVADK NDNEPKFMQDVFTFYVKENLTPNSPVGMVTVIDADKGQNAEMSLFIEEEEDIFSIENDTG TIFSTMSFDREQKTSYTFRVKAVDGGDPPRSATATVSLFVMDENDNPPTVTFPINSSYTL LPPSSNIRTVVRTVLATDTDTGINADLNYSIIGGNPFKLFEIDGGSGVISLVGKLEQKHY GLHRLVVQVNDSGQPSQSTTTLVHVYVNETLSNSTIVEAQVAKSLGTPLNTNIAGDPNYD LGKQRLSIVIGVVSGIMTVILIILIVVMARYCCPKNKNGYEAGKKDHEDFFTPQQHDKGK KPKKDKKNKKSKQPLYSSIVTIEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPGSPDL ARHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISLGSDHCSEYSSQTI NKYNKQPFRRVTFSVVSQPQDPHQQGSLQSCYDSGLEESETPSSKGSSGGPRLGALPLPE DSYERTTPDGSVGEAEHMENDTRPLPDVAMTGKCTRECDEYGHSDSCWMPVRTSPERRPK TTTTQQPKLSTFMTGGGSGSSPPEQQQQHPGSQEALAAMSNGDPSSHVMLGNDRNRNLLN KKTASSSSSYEGFGSPSFSPPGVEEGVVGHPIEEIPLSPTGEYKPSTCGTLTRREVYL NT seq 3777 nt NT seq  +upstreamnt  +downstreamnt atgaggactactggcgcagtggactatatatgctacagtatactcatcctgcagctgctg aatcagcccgatgccaagcaagtattgcgatatcgcttggctgaggagggacccgccgat gtcagggtagggaatgtagccaaagatctcggaatcgtcgccgggtctggtgaggtgacg tttaccctcgagtccggctctgattttttcaaaatagataatataacaggcgagctgacc actaatgaacggcggatagaccgtgaaaaattacagcagtgccaaatgatatttgatgaa aacgaatgtttcatagattttgaagtgtcagtaattggaccggctcagagctgggttgac ctgtttgaggggaaagtcattattttagacataaatgacaacaccccgtctttcccctct cctgttctgacactgtcagtggaggagaatagaccgattggcactctctatctcctgtcc actgccaccgacagagattttggcaggaacggaattgagagatatgagcttattcaggac agcggggagagctccaggcgcctgggttcgaactcagggggacgcggagtggacagcaag agatttgatgagggggcagccgggagcagcgtctttgaactgcaagttgctgacacaact gatggggaaaaacagccacagctcatcattaaaggagcgctggacagggagcagagggac tcttatgagctcaccctgcgtgttagggatgggggcgaccccccacgctcctcccaggcc atcctgcgggtgatgatcactgatgtgaatgacaacagcccccgctttgagaaggctgtg tatgaggctgacctgccagagaacagctcccctggtgcccccatcctgcagctgaaagca gctgacgcagacgttggggtgaacggtcagattgagtacgtatttggtgcggccacagag tcagtgcgtaggctgctgaggctggacgagagctcggggtggcttagcgtgctccatcgt attgaccgggaggaggtgagccagctgcgcttcacagtaatggcaagggatcgaggtcag ccacccaaaatggacaaggccaccgtggtcctcaacatcaaagatgagaacgacaacgtg cctgctatcgagattcgtaagattggacgcattttcctgaaagatggagtggccaatgtg gcagaggacgtagtggtggacacgcctatagccttagtccaggtgtcagaccgcgatcag ggcgagaacggcatcgtgacctgcactgtggtgggggatgtgcccttccagctcaaaccg gccagtgagattgagggtgagatgaataagaagaaatactttctccatacatcagcaccg ctggactatgaggccacacaggagtacatcgtggtcatcgtggctgtggactcaggaagc cctagcctggccagtaataactcgcttatcgtgaaggtgggagacttcaacgacaaccca cccatctttagccagaacgtggtggaggtgtcctttccggaaaacaatgccccaggcgag agggtgaccacagtgcaggcaatcgatgctgacagtggcaagaatgcggaaatcgcctac tcgctcgtctcctctgtaaatgggatattctccattgatgcagacagtggtgacatcaga gtaaacaccattctggacagggagcaaacagagaggtatgagttcaaagtgatagctaaa gataagggcatgcccatactccaggggtcagccactgtggtggtcctggtggcagataag aacgacaatgagccaaagttcatgcaggacgtgttcaccttctacgtcaaagagaatcta acacccaacagccctgttggcatggtgaccgtcattgacgctgacaagggccagaacgct gaaatgagcctcttcatcgaggaagaggaggatatcttctccattgagaatgacacagga accattttctccaccatgtcatttgaccgcgagcagaagacttcatacacatttagggtc aaggccgtggacggtggagacccgcccagatccgccacagccaccgtgtcacttttcgtg atggacgagaacgacaacccgccaaccgtcaccttccccatcaacagctcttacaccctc ctgcccccctccagcaacatcaggactgtagtacgaaccgtcttggccactgatacggac acagggatcaacgctgacctgaactacagcatcatcggcggaaaccccttcaaactgttt gagattgacgggggcagcggggtcatctcactggtggggaagctggagcagaaacactat ggcctccatagacttgtggttcaggtgaacgacagcggccagccctcccagagcaccact acccttgtgcatgtctatgtcaatgagaccctctccaactccactatcgtggaggcccag gtggccaagagcctgggtacgccgctcaataccaacatcgctggtgatcccaactacgat ctgggtaagcagcggctgagcatcgtcatcggggtggtgtcgggcatcatgacggtcatt ctcatcatcctcatcgttgtcatggcccgctactgctgccccaagaacaagaatggctat gaggcaggcaagaaggaccacgaggacttcttcacccctcagcagcatgacaagggcaaa aagcccaagaaggacaagaagaacaagaaatccaaacagccactgtacagcagcatcgtc accattgaggcctccaagcccaacggccagcgctacgatggcgtcaacgagaagctgtct gacagccctgggatgggccggtaccggtctgttaacggagggcctgggagcccggatctg gcccggcactacaagtccagctcgccactgcccacggtccagctccacccccagtcaccc acggccgggaaaaagcatcaggctgttcaggacctgccccctgccaacacctttgttggc accggagataacatttcccttggatctgaccactgctctgagtatagcagtcaaaccatc aacaagtacaacaaacagccgttccgccgagtgaccttctcggtggtgagccagccccaa gacccccaccagcagggatcgctgcagagctgctacgacagtgggctggaggagtcggag acgcccagcagcaagggctcttcggggggcccaaggctgggtgcgctgcccctgcccgag gacagctacgagaggaccacgccggatggcagtgtcggtgaggcagagcatatggaaaat gacacccggcccttgcccgacgtagccatgacaggcaagtgcacccgggaatgcgatgag tacggccactctgactcctgctggatgcctgtgcgcacgtcgcctgagcgccggcccaag acaaccacaacccaacaaccaaagctttccaccttcatgactggcggtggcagcggcagc agccctcccgagcagcagcagcagcatcctggcagccaggaagccctggccgccatgtcc aatggagacccctcctcccacgtgatgctgggcaatgaccgcaaccgcaacctgctcaac aagaagacagcctcctcctcgtcctcctacgagggcttcggctcgcccagttttagcccg ccgggggttgaagagggggtggtgggtcaccccattgaggagatccctctgtcccccacc ggggagtacaagccctcaacctgcggcacgctcactcgccgggaggtctacctgtga

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