Salmo trutta (river trout): 115194109
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Entry
115194109 CDS
T08542
Name
(RefSeq) DNA polymerase zeta catalytic subunit-like
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
115194109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stru03400
]
115194109
Enzymes [BR:
stru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
115194109
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
115194109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
POL3_N
REV3_N
zf-C4pol
DNA_pol_B_exo1
FTCD_N
Motif
Other DBs
NCBI-GeneID:
115194109
NCBI-ProteinID:
XP_029609354
Ensembl:
ENSSTUG00000036803
LinkDB
All DBs
Position
1:complement(31467376..31517525)
Genome browser
AA seq
3043 aa
AA seq
DB search
MFAVRIVTADYYLASPLKDLDVCYNEFRESDVKKVPVVRIFGATPAGQKTCLHLHGIFPY
LYVPYDGYGQQAERYLRQVAFSVDRALNVSMGNPSSNTQHVFKVALVSGMPFYGYHAMEK
KFMKIYLYNPQMVKRVCELLQGGAVMNKSYQPHEAHIPYLLQLFIDYNLYGMNLVNLGAV
KFRRRRPCREGFPPDRQGCSSRPGTSPLKSPCTSKLSDSTLGGMFVRWEDDAIACSLVLE
DVEKQSTCELEVDAVAVDILNRLEIENQIGSNPGLQAIWEDEKQRRREKNQSSQMETPQS
QDRGFVASTDSERAFMQRFKEILKENEFDVTQSGSVDDAAEEQDPSPADLSLHPDVLTPE
LLRCTPANLVEAHRDSQTDTKRSRGKDQEEAIVDEEAILSLLESSQTFLPLSQKSNHSPI
LDSSQDHAMVDLLAGLEDDGYRAAPMRQNSQHSLPGGGSAHYNSDEEEEGPELEREEAEL
SLLMSQRWDSDLPEQSTRRRPGVKEAEESFSDEPQDSSDEEMEWSGNNSLFANLSIPQLD
GAADENSDSSVTDKGSRTHSSLTVTDKILGKRNPFPGETVHLEPPSSAKILLDRKHPEHR
QALSQDTEEPADKHFLSLSQDSHECSTGFKVNKEIPYIQPVKHPIPCNIANQAEVSQICV
DKIDVVRPLYTYEKKTMALDESDLDVFPFGNGKITQSRKKYSSIKNVEKNRLSILQNHRS
FSLCYSELRNCPSKTDLELGQKDCKSPIPRNSINPAPCPIEEDELIASREGEMGQGSEEG
DMGELKIRYEDYQENKTERTIVAQQEAHYKFFPSVILSNCLTRPAKKVVGNKLTDGCAKL
EQAEPRRSRLKLGKRRSAAAAQKAKANAGESLASDSQVGMALTSIMPACPKSTDTVAKSV
MEETGPTAPLPESPAPAHSPVLAPSPLPAPVVSPTPSPVPTSPTEASVEGRLAPLPELPA
KVTSTKASGLPGSKYTLRAKRKMSYDSSEDGEHSGASRVKHPLALRDNYVRFKDNYILST
QELKYQKRRKMSRKEPREPPIIIKYIIINRFKGRKNMLVKMAKVSAEEQRVVLTPDKLET
YTKMAPLKTFWPKVLESCAVKFPLSEPKANKKQPKRKVKVNTTTTKKTVSGPPKPRVRVR
QGGERPRRTKGLRKASTLPSLPCPRPCYCELADDHATEYSDVMVELGYLSERSPSPTDST
PPRCWSPSDPLMEAMSSDGLMNPLNDPCLSSVCQETPPESLGRGVRNRSRTAKPSSPRRR
TKSANKLSAEVKKESATRRKSTTGTPRRRKKDLETVDGTSVGGDSTNTTTRTRRPRRKKQ
AEEAEQLPVKSRDCDSSQLLFPEDELPPTESSSKAVPPFQQSANKTSQIIDGSHGVTGSK
SLSQFIEPKSEDYETSIMEVNQSFALKLFQTHPGQLQGCAVKAETTVDECTAPQVKSPMV
GKSKGAPKAGSPHSGLRNGEALPEDTSGLAVLKKLLQKRQQRGGQCLPTQTVGTEISSST
TTQPPGPTPDPAAAKPPRARKTPSATPRKPRVSRTTTPKEKKPRSRKGKANSQPELPVKQ
EPPMSDDSPVFLSDPGLDSCYSIEDSLSPELPHNYNFDINAIGIGSQTEFSSLYMGSQFV
LTDKNLPQKFLSDITQEADPALALSIEKRPDRLSGSGEALQRSLSGPLSPDLFDKPENGE
SVSNHLSSLDSERLLRSREWGTSLGKLHGLSHFQGFHCERKELLFSAFDPVLPLPLSSAS
FADNEGSPTGDLLEGNDALTSTTASSSPRSVNSISQVKTSSQLLRGTGGGAHILKPLMSP
PNREEILTTLLDLEMSEATFQEPFCSNPSDAPGKPREVGGRKLTVETRLAKELAEFNGDL
SLEGLHFWKTAFSAMTRPGSSHTLGAEATGDQAQLSPSSAGDQKVILLPCRSAPSRERVQ
LWLEARKQYEHLKRGRRDMGALERGRLEQIREEQQTDRTEQPTLFHCAALKEEEGFVKPS
DIRTQRDNLSLHISPVEGVETQDSPRGVKPVSDINTRDPEEEYYGKSISPDSPDLPPWQQ
PTQPSPSRLDGVEGERRGSDLGSPLSPRLCTSPERSEEKHFLSPSPLPSTKSRGDRERTS
PHLQLHSTPVLRRRRCRGESEPVCSTPLTEDAESPSQRLQHRRGEHTETLRRVLLTTQMK
NQFAALNVTKKDNSQIEGPSISNSYGFKVSMQNLQDAKALHEVQHLTLMSMELHARTRRD
LEPDPEFDPICALFYCFSSDAPLLDSDKTQLTGAIVVDKDCQDSGQGVRGTAPLLVRSGV
SGLQVTYAVDEKQLFQEVVTIMRRFDPDMLVGYEVQMRSWGYILQRASALNFDLCQQLSR
VPGDAKENRFAAERDEYGADTMTEIHIIGRIVINLWRIMKTEVTLNNYSFENVAFHVLHQ
RFPLYSPRTLSDWFDHNTDLHRWKMVDHYVSRLGGTMQLLQQHDIIGRTSELARVFGIQF
YHVLTRGSQYRVESMMLRVAKPMNYIPVTPSMQQRAQQRAPQCIPLVMEPESRFYSNSMV
VLDFQSLYPSIVIAYNYCYSTCLGHVESMGTPDEFKFGCTSLRVPPELLYQLRNDITISP
NGIAFVKPTVRKGVLPSMLDEILNTRFMVKRSMKTYKQDKALMRLLDARQLGLKLIANVT
FGYTAANYSGRMPSVEVGDSIVHKARETLERAIKLVNDTKKWGAHVVYGDTDSMFVLLKG
ATKEQAFKIGNEIAEAVTATNPKPVKLKFEKVYLPCVLQTKKRYVGYMYESLDQKDPVFD
AKGIETVRRDGCTAVSKILERSIKLLFETRDISQVKQFVQRQCVKVLEAKASMQDLTFAK
EYRGSSSYRPGACVPALELTRRMMAYDRRLEPRVGERVPYVIVYGTPGVPLIQLVRRPLE
VLQDPGLRLNATYYITKQILPPLRRIFQLIGVDVLSWYQELPRVQKASCSMVARGEEVGR
KGTISQYFTTLHCPVCDELTQLGVCASCRAEPQRVAVTLYQDMRLWESQQDQLLKICRNC
SGSAERQVPCVSLDCPVLYKLSRVNRQLTKAPYLRQLLEQFGF
NT seq
9132 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctgtccgcatcgtcaccgctgactactaccttgcaagtcccctcaaagacttg
gacgtctgttataacgaattccgcgaaagtgacgtgaagaaagtaccagtggttcgaatt
ttcggggcaacaccagcaggtcagaagacctgtctccacctccatggcatcttcccctac
ctctatgtgccctacgatggctacgggcagcaggcggagcgctacctgcgtcaggtggcc
ttcagcgtcgacagggccctcaacgtgtccatgggaaacccctcctccaacacacagcac
gtcttcaaggtggcactggtctccggcatgcctttttatggataccatgccatggagaag
aagtttatgaagatctatctgtacaatcctcagatggtcaaaagggtgtgtgagctgtta
caaggaggcgctgtgatgaacaagagctaccagccccacgaggcccacatcccctacctg
ctgcagctgttcatcgactacaacctgtacggcatgaacctggtcaacctgggagccgtc
aagttccgccggagacggccgtgcagagagggatttcccccagatcgccagggctgcagc
agcaggccaggcaccagccccttgaagagcccctgtacctccaaactgagtgacagtacg
ctgggaggcatgtttgtccgctgggaggatgatgccatagcctgttccctggtcttggag
gatgtggagaaacagagcacatgtgagctggaagtggatgctgtggctgtagacatcctc
aaccgtctggagatagagaatcagattggcagcaaccctggcctgcaggccatctgggag
gatgagaagcagagacgacgagagaagaaccagtcatctcagatggagaccccacagtca
caggatcgtgggtttgtcgcctcgacggacagcgagagagccttcatgcagagattcaag
gagatcctgaaggaaaatgagtttgatgtgactcagtctgggtctgtggatgacgcggca
gaggagcaggatccatccccagctgatctgtctctacaccctgacgtcctgaccccagag
ctgctgcggtgtacaccagccaacctggtagaggcgcatagagactcccagacagacact
aaaaggagccgtggtaaagaccaggaggaggccattgtggatgaggaggccattctgagt
ctgttggagagcagtcagacctttctccccctctcccagaaatccaaccactcacccata
ctagacagcagccaggaccatgccatggtggacctgctggcaggcctggaggatgatggg
tatcgggcggcccctatgaggcagaactcccagcattccctgcccgggggagggagcgct
cactacaacagtgatgaggaggaggaggggccagagctagagagggaggaggcagaactc
agtctgctgatgtcacagagatgggacagcgaccttccagaacagtctactagacggaga
cctggtgtgaaggaggcagaagagagcttcagtgacgagccccaggactcgtcagatgag
gagatggaatggagtgggaacaactctctttttgccaacctgtccattcctcagctggac
ggtgctgcggatgagaacagtgattcatcggtaacggacaaaggctccaggacccactcg
tccctcaccgtcaccgataagatcctggggaagaggaacccctttcctggggagacagtc
cacctggagcccccgtcttcagccaagatcctcctagaccgcaaacacccggagcaccgg
caagccctctcacaggacacagaggaaccagctgataagcacttcctctccctcagccaa
gacagtcatgagtgttccacagggttcaaggtgaataaagagataccttacatccagccg
gtcaaacaccccattccctgcaacatcgccaaccaggccgaggtctctcagatctgtgtg
gacaaaatagatgtcgttcggcctctgtacacctacgagaagaagacgatggctctggat
gagtcggatctggacgtctttccgttcggcaacgggaaaatcacccagagcaggaagaag
tacagcagcatcaagaatgtggagaagaatcgcctgtccatcctgcagaaccacaggagc
ttctccctgtgttactctgagctgaggaactgccccagcaagacagatctagagctgggt
cagaaagactgtaaaagccccataccgaggaacagtataaacccagccccctgccccata
gaagaggacgagctcattgcctcgcgggagggtgagatgggccaaggcagcgaggagggg
gacatgggcgagctgaagatccggtacgaggactatcaggagaacaagactgagaggacc
atagtagcccagcaggaggcacactacaagttcttccccagtgtcattctctccaactgc
cttaccaggcccgccaagaaggtggtgggcaacaagttgaccgatggctgcgctaagcta
gagcaggcagagccacgcaggtccaggctaaagctgggcaagaggaggtcggctgcagca
gcccagaaagctaaagcgaacgctggggaaagcctagcctctgacagccaagtgggcatg
gccttaacgtccatcatgcctgcctgtcctaagagcacggacacagtggcaaagtcagtc
atggaggagactggacccacagcaccactcccagaatcgcctgctcctgcccattcccct
gtcctggccccttcccctcttccagcccctgtcgtgtcccctacaccgtccccagtcccc
accagtcccactgaggcgtctgtggagggcaggttggccccactgcctgagcttcctgct
aaagtgaccagcaccaaagcctccggtctgcctggcagcaagtacaccctgagggccaag
cgcaagatgagctacgacagcagcgaggacggggaacactcgggcgcctctcgtgtgaag
caccctctggccctccgagacaactacgtccgcttcaaagacaactatatcctcagcacg
caggaactcaagtaccagaaacgacggaagatgtccagaaaggagccacgggagccaccc
atcatcatcaagtacatcatcatcaacaggttcaagggtcggaagaacatgttggtgaag
atggccaaggtgagtgctgaggagcagcgggtggtgctcacaccagacaaactggagacg
tacactaaaatggcccctctcaagaccttctggcctaaggttctagagtcttgtgcagtc
aagtttcctctcagtgagcccaaggctaataagaaacagcccaaacgaaaggttaaggtc
aacaccaccaccactaagaaaacggtcagtggcccacccaaacctcgagtcagagtcagg
caggggggtgagaggcctagaaggactaaaggccttaggaaagcctcgactctaccctct
ctgccatgcccgcggccatgttactgtgaactggccgatgaccacgccactgagtactct
gatgtgatggtggagttgggttatctgtctgagagatcccctagccccactgattcaacc
ccaccccggtgttggtcccccagtgacccccttatggaagccatgtcctctgatgggttg
atgaacccattaaatgatccctgtctcagttctgtgtgtcaggaaacccccccagagtcc
ttaggccgaggtgtgcggaaccgaagccggactgctaaacctagcagcccaagaagacgg
actaagtctgctaataagctttcggcggaagtcaaaaaggagagtgccacgagaaggaaa
agtactactgggactccacggaggagaaagaaagatctagaaacagttgatgggactagt
gtgggtggtgactctactaacaccaccacaagaacgcgaaggcctcgtaggaagaagcag
gctgaagaggctgaacagctccctgtaaaaagcagagactgtgacagttcccagctcctc
ttcccagaggatgagttgcctcctactgaatcctcttcaaaggctgtaccaccctttcag
cagtcagctaacaaaaccagccagatcattgacggctcccatggggtcactggctctaaa
tccctgtcccagttcattgaaccaaagtccgaggactatgagacctccatcatggaggtg
aaccaaagctttgctctcaaactcttccaaacgcatccaggccaactgcagggttgtgct
gtgaaggcagaaactacggttgatgagtgcacagctcctcaggtgaagtcccccatggtg
gggaagagtaagggcgcccccaaagcagggtccccccactcaggccttaggaacggggag
gccctacctgaggatacctctggcctggctgttctgaagaagctcctgcagaagaggcag
cagagaggtggtcagtgcctcccaacccagacagtgggcacagagatctcctcctccact
acaacacagccccctggccccacaccagaccctgctgcagccaagccaccaagagccagg
aaaactccctcagccaccccacggaaaccccgggtctcaagaactacaactcccaaggag
aagaagcccagaagcaggaaaggtaaggcgaactctcagccggagttaccggtgaagcag
gagccacctatgtcagacgacagcccagtgttcctgtcagacccaggcctggacagctgc
tactccatagaggacagcctctccccagagctcccacacaactacaacttcgacatcaac
gctatcggcattggcagccagacagagttctccagcctgtacatgggcagccagtttgtt
ctgaccgacaagaatctgcctcagaagttcctgagtgacatcacccaggaggccgaccct
gcgctggcgctgagcattgagaagaggcctgataggctgtctgggtctggggaggcgctc
caacgaagcttgtctggacctctgagtcctgacctctttgacaagccagaaaatggtgaa
tctgtctccaaccatttatcttctctggattccgagaggttactgaggagcagagagtgg
ggaacgtccctgggcaaactccacggcctcagccacttccagggctttcactgtgagagg
aaagagctgctgttctctgccttcgaccccgtcttaccgctgcctttgagctctgcgtct
ttcgcagacaacgaaggatcaccgaccggggacttactggaggggaatgatgctttgacg
tcgaccacggccagtagttctccgcgctcggttaactctatatcccaggtgaagaccagt
agccagctcctcagggggacaggggggggagcccacatcctcaagcccctcatgtcccct
cccaaccgggaagagatcctcaccaccctcctggacctggagatgtctgaggccaccttt
caggaacccttctgcagcaacccctcagatgccccagggaaacccagggaggtcggtggg
cgtaagttgacggtggagaccaggttggccaaggaactggctgagttcaacggggaccta
tccctggaggggctacacttctggaagacggccttctccgccatgacacggcccggctcc
tctcacaccctgggagcagaagccaccggagaccaggcccagctcagcccctcttcagcc
ggggaccagaaggtcattctgctgccctgtaggagcgcccccagccgcgagcgcgtccag
ctatggttggaggccaggaaacagtacgagcatctgaagaggggcaggagagacatggga
gcactggagaggggacggttagaacagataagagaagagcagcaaacggacaggactgaa
cagcccactctgttccattgtgcagcattgaaggaagaggaggggtttgtgaagccctcc
gatatcaggactcagagggacaatctctctctacatatatcacctgttgagggggtggaa
actcaggacagccccagaggagtgaagcctgtatcagacattaacaccagagaccccgag
gaggagtactacggtaaatccatctctccagactcaccagacctgccgccctggcagcag
cccacgcagcccagcccctcaagactagatggagtagagggtgagaggagagggtcagat
ctagggtcacccttgtcccccaggctctgcacctccccagagaggagcgaggagaagcac
ttcctcagtccctctcccttgccttccacgaagagccggggggacagggagaggaccagc
ccccaccttcagctccacagcaccccagtcctcaggagacgcagatgcagaggcgagtct
gaacctgtgtgcagcacccctttgactgaagacgcagagtctccatctcagagactgcag
cacaggagaggggagcacacagaaaccctgaggagagtgctactgaccacacagatgaag
aaccagtttgctgctttgaacgttacaaagaaagacaactctcagatcgagggccccagc
atcagcaactcgtacggcttcaaagtcagcatgcagaacctccaggacgctaaagccctg
cacgaggtgcagcacctgacgttgatgagcatggagcttcacgcgcggacccggcgggac
ctggaacccgaccccgagtttgaccccatatgtgccttattctactgcttcagctctgac
gcaccccttctggactcagacaagacgcagctgactggggccattgtggtggacaaggat
tgccaggacagtggccaaggtgtcagaggaacagcacccctgctggtcagatctggggtc
tcaggactgcaggtcacctacgctgtggatgagaagcagctgttccaggaagttgtcact
atcatgaggaggtttgacccagacatgctggtaggctatgaagtccagatgcgttcctgg
ggctacatcctccagcgggcatcagcactcaactttgacctgtgccagcagctctccagg
gtgccaggtgacgccaaggagaaccgtttcgctgcggagagggacgagtacggcgcggac
accatgacagagatacacatcatcggccgcatcgtcatcaacctgtggaggatcatgaag
actgaggtaacgttgaacaactacagttttgagaatgtggccttccacgtcctacaccag
cgcttccccctgtacagcccccgcaccctgtcggactggttcgaccacaacacggacctg
cacaggtggaagatggtggaccattatgtgagccggttgggcggcaccatgcaactgctc
cagcagcacgacatcatcggcaggaccagcgagctggccagggtgttcgggatccagttc
taccacgtgctcaccagaggatcccagtaccgggtggagtccatgatgctgcgcgtggcc
aagcccatgaactacatccccgtgacgcccagcatgcagcagagagcccagcagagggcg
ccgcagtgcatcccgctggtcatggagcccgagtcacgcttctacagcaactctatggtg
gtgctggacttccagtcgctctacccctccatcgtcatcgcctacaactactgctactct
acctgcctgggccacgtggagagcatgggaacgcccgatgagtttaagtttggctgcacc
tccctgcgggtcccccctgagctcctctaccagctccgcaatgacatcaccatctctccc
aacggcatcgcttttgtcaagcccacggtgaggaagggggtcctgcccagtatgttggat
gagatcctgaacacgcggttcatggtgaagcgctccatgaagacttacaagcaggacaag
gccttgatgaggctcctggacgccaggcagctgggactcaagctcatcgccaacgtcacc
ttcggctacaccgccgctaactactccggacgcatgcccagcgtagaggttggagatagt
attgtccacaaagccagggaaaccctggagagggccatcaagctggtcaacgacaccaag
aagtggggagcccacgttgtctatggtgacacagacagcatgtttgtcctgctaaagggt
gcgactaaagagcaggccttcaagatcggcaacgagattgccgaggcggtgactgctacc
aaccctaaacctgtcaagctgaagtttgagaaggtgtacctcccgtgcgtgctccagaca
aagaagcggtacgtgggctacatgtacgagagcctggaccagaaggaccccgtgttcgac
gccaaggggatcgaaactgtgcgccgagacggctgcactgctgtttccaagattttggag
cgttccatcaagctgctgtttgagacgcgggacatcagccaggtgaagcagtttgtgcag
cgtcagtgtgtgaaggtgctggaggccaaggccagcatgcaggacctgaccttcgctaag
gagtacaggggcagcagctcctaccggccgggggcctgcgtccctgctctggagctcacc
aggcgtatgatggcttatgaccggcgcctggagccacgggtgggcgagcgggtgccctac
gtgatcgtgtacgggacgcccggcgtgcccctcatccagctggtgcggcggcccctggag
gtgctgcaggacccgggcctgcgcctcaacgccacctactacatcaccaagcagatcctg
cccccgctgcggcgcatcttccagctcatcggtgtggatgtgctcagctggtaccaggag
ctccccagggtccagaaggcgtcatgctccatggtggccagaggggaggaagtggggagg
aaggggactatctcccagtatttcaccacactgcactgtcctgtgtgtgacgagctcacc
cagctaggggtgtgtgccagctgccgggccgagccccaacgcgtggccgtcactctctac
caggacatgcggctttgggagagccagcaggaccagctgctaaagatctgtcggaactgc
agcggcagtgcggagcggcaggttccgtgtgtgtctctggactgtcctgtgctctacaag
ctgtcccgggtcaacagacagctcaccaaggccccctacctccgacagctcctggagcag
ttcggattctga
DBGET
integrated database retrieval system
