KEGG   Salmo trutta (river trout): 115194145
Entry
115194145         CDS       T08542                                 
Name
(RefSeq) splicing factor 1-like
  KO
K13095  splicing factor 1
Organism
stru  Salmo trutta (river trout)
Pathway
stru03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115194145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:stru03041]
    115194145
Spliceosome [BR:stru03041]
 Complex A
  Other components
   Complex A specific factors
    115194145
SSDB
Motif
Pfam: SF1-HH KH-I_KHDC4-BBP KH_1 zf-CCHC KH_12 zf-CCHC_3
Other DBs
NCBI-GeneID: 115194145
NCBI-ProteinID: XP_029609438
Ensembl: ENSSTUG00000046027
UniProt: A0A674E401
LinkDB
Position
5:39921751..39935319
AA seq 684 aa
MATGANATPLGKLHPSIGAKRGFEAGPGAGLMPTPGPPVSFPSLPNFQPPIPNVSFPQAH
PVFAAVAAFPTPPQPPQGAGIPSQSDFGQKKARKRSRWSSETPDQKTVIPGMPTVIPPGL
TRDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKK
IEEERHSLITDMVALNPEFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGNTL
KNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRT
ILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTEPRSVTNTTLCTKCGG
AGHISSDCKFTSSFAAPRAGEPPQSAQDKARMDKEYLSLMAELGEAPVPSSGGGHSNNQN
SGHNRGNNNNQPPPSRPPWMNSGQSENRNFNSMHGGHGGHGNQHGGHGNHGGHGGHGGHH
NFPPPMSNMGGHNMPPNNGMPPPWMQPPPPPMGQGHGHHMGLLPPPMGMMPPPPPPPNNQ
PPPPPSGPLPPWQQQAPPPPPASSMATSAPLPWQQNTTTTSSPGSGNLPPWQQPQQSAAS
ATQPPPPMGNPSMVPPPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPMDPSNFVTM
MGMGVAGMPPFGMPPAPPPPPPQN
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggctacgggagcaaatgcaacccctctggggaagctgcacccgagtattggcgctaaa
cgaggctttgaagccgggcccggtgcggggttaatgcctacaccggggccgcctgtttcc
tttccctcgctcccgaactttcagcccccaattccaaacgtctctttcccgcaagctcac
ccagtatttgctgcggtggccgcttttcccaccccgccacaaccaccccaaggagcagga
attccgtctcagtcagacttcggtcagaaaaaagccaggaaaaggagccgctggagtagc
gagacacccgaccagaagacggtcattcctggcatgcccaccgtcatcccgcctggactg
actcgggatcaggagagggcctatatagtccaactgcagatcgaagacctgactcgtaaa
ctgcgtacaggagacctgggaatccctgttaaccctgaggacaggtccccgtctccagag
cccatctacaacagcgaggggaagaggctgaataccagggagtaccgcacacgcaagaag
attgaggaggagcgtcactccctcatcaccgacatggtggcactcaaccctgagttcaag
ccccccgctgactacaagcccccagctactagggtcaacgacaaggtgatgatcccacag
gacgagtaccccgagattaactttgttgggttgctcattgggccacgtggcaacaccctg
aagaacatagagaaggagtgctgtgccaagatcatgatccgtggcaagggctcggtgaag
gagggcaaggtgggccgtaaggacggtcagatgctgccgggggaggacgagccgctgcac
gccctggtcaccgccaacaccatggagaacgtcaagaaggcggtggaacagatccgtacc
atcctgaagcagggtatcgagacccccgaggaccagaacgacctcaggaagatgcagctg
agggaattggccagactcaacggcaccctgagagaggacgacaaccggatccttcgtccg
tggcagagcactgaaccccgcagtgtcaccaacaccaccctctgtaccaagtgcggtggc
gcaggccacatctcctctgactgcaagttcaccagctcctttgcggcgcccagggccggt
gagcctccccagtctgcccaggacaaggcccgtatggacaaggagtatctgtccctcatg
gctgagctaggcgaggcccctgttccctcctctggcgggggacactccaacaaccagaac
agtggtcacaacagaggcaacaacaacaaccagccaccaccgagccgtcctccctggatg
aactctggccagtctgagaacaggaacttcaacagcatgcacggaggccacggtggtcat
ggcaaccaacacgggggtcatggcaaccacgggggtcacggaggtcacggaggccaccac
aacttcccaccccccatgtccaacatgggagggcacaacatgccccccaacaatggaatg
ccacccccgtggatgcagcccccaccgccccccatgggccagggacacggacaccatatg
ggtctgctgccaccacccatgggtatgatgccaccaccacctccgccccccaacaaccag
cctcccccgccaccttcaggtcccctgccaccatggcaacagcaggcccccccaccccct
cccgccagcagcatggccactagtgcaccactgccatggcaacagaataccaccacgaca
tccagtcctggctctggcaaccttcccccctggcagcagccccaacagtccgctgcctcg
gccacccagccccctccgcccatgggcaacccctccatggtcccccctccgcccggggtg
cagccccctctcccccccggcgccccacctccccctcctcccccaccccccggctcggcc
ggcatgatgtacgcccctcctccccctccgcccatggacccctccaactttgtcaccatg
atggggatgggggtggcaggcatgccccccttcggtatgccccccgcaccaccacctcca
ccccctcagaattaa

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