Salmo trutta (river trout): 115194145
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Entry
115194145 CDS
T08542
Name
(RefSeq) splicing factor 1-like
KO
K13095
splicing factor 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115194145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115194145
Spliceosome [BR:
stru03041
]
Complex A
Other components
Complex A specific factors
115194145
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
115194145
NCBI-ProteinID:
XP_029609438
Ensembl:
ENSSTUG00000046027
UniProt:
A0A674E401
LinkDB
All DBs
Position
5:39921751..39935319
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AA seq
684 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFEAGPGAGLMPTPGPPVSFPSLPNFQPPIPNVSFPQAH
PVFAAVAAFPTPPQPPQGAGIPSQSDFGQKKARKRSRWSSETPDQKTVIPGMPTVIPPGL
TRDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKK
IEEERHSLITDMVALNPEFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGNTL
KNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRT
ILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTEPRSVTNTTLCTKCGG
AGHISSDCKFTSSFAAPRAGEPPQSAQDKARMDKEYLSLMAELGEAPVPSSGGGHSNNQN
SGHNRGNNNNQPPPSRPPWMNSGQSENRNFNSMHGGHGGHGNQHGGHGNHGGHGGHGGHH
NFPPPMSNMGGHNMPPNNGMPPPWMQPPPPPMGQGHGHHMGLLPPPMGMMPPPPPPPNNQ
PPPPPSGPLPPWQQQAPPPPPASSMATSAPLPWQQNTTTTSSPGSGNLPPWQQPQQSAAS
ATQPPPPMGNPSMVPPPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPMDPSNFVTM
MGMGVAGMPPFGMPPAPPPPPPQN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctacgggagcaaatgcaacccctctggggaagctgcacccgagtattggcgctaaa
cgaggctttgaagccgggcccggtgcggggttaatgcctacaccggggccgcctgtttcc
tttccctcgctcccgaactttcagcccccaattccaaacgtctctttcccgcaagctcac
ccagtatttgctgcggtggccgcttttcccaccccgccacaaccaccccaaggagcagga
attccgtctcagtcagacttcggtcagaaaaaagccaggaaaaggagccgctggagtagc
gagacacccgaccagaagacggtcattcctggcatgcccaccgtcatcccgcctggactg
actcgggatcaggagagggcctatatagtccaactgcagatcgaagacctgactcgtaaa
ctgcgtacaggagacctgggaatccctgttaaccctgaggacaggtccccgtctccagag
cccatctacaacagcgaggggaagaggctgaataccagggagtaccgcacacgcaagaag
attgaggaggagcgtcactccctcatcaccgacatggtggcactcaaccctgagttcaag
ccccccgctgactacaagcccccagctactagggtcaacgacaaggtgatgatcccacag
gacgagtaccccgagattaactttgttgggttgctcattgggccacgtggcaacaccctg
aagaacatagagaaggagtgctgtgccaagatcatgatccgtggcaagggctcggtgaag
gagggcaaggtgggccgtaaggacggtcagatgctgccgggggaggacgagccgctgcac
gccctggtcaccgccaacaccatggagaacgtcaagaaggcggtggaacagatccgtacc
atcctgaagcagggtatcgagacccccgaggaccagaacgacctcaggaagatgcagctg
agggaattggccagactcaacggcaccctgagagaggacgacaaccggatccttcgtccg
tggcagagcactgaaccccgcagtgtcaccaacaccaccctctgtaccaagtgcggtggc
gcaggccacatctcctctgactgcaagttcaccagctcctttgcggcgcccagggccggt
gagcctccccagtctgcccaggacaaggcccgtatggacaaggagtatctgtccctcatg
gctgagctaggcgaggcccctgttccctcctctggcgggggacactccaacaaccagaac
agtggtcacaacagaggcaacaacaacaaccagccaccaccgagccgtcctccctggatg
aactctggccagtctgagaacaggaacttcaacagcatgcacggaggccacggtggtcat
ggcaaccaacacgggggtcatggcaaccacgggggtcacggaggtcacggaggccaccac
aacttcccaccccccatgtccaacatgggagggcacaacatgccccccaacaatggaatg
ccacccccgtggatgcagcccccaccgccccccatgggccagggacacggacaccatatg
ggtctgctgccaccacccatgggtatgatgccaccaccacctccgccccccaacaaccag
cctcccccgccaccttcaggtcccctgccaccatggcaacagcaggcccccccaccccct
cccgccagcagcatggccactagtgcaccactgccatggcaacagaataccaccacgaca
tccagtcctggctctggcaaccttcccccctggcagcagccccaacagtccgctgcctcg
gccacccagccccctccgcccatgggcaacccctccatggtcccccctccgcccggggtg
cagccccctctcccccccggcgccccacctccccctcctcccccaccccccggctcggcc
ggcatgatgtacgcccctcctccccctccgcccatggacccctccaactttgtcaccatg
atggggatgggggtggcaggcatgccccccttcggtatgccccccgcaccaccacctcca
ccccctcagaattaa
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