Salmo trutta (river trout): 115194198
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Entry
115194198 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115194198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115194198
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115194198
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115194198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
PHD_NSD
zf_RING_Vps8
zf-ANAPC11
zf-UDP
zf-RING_Vps41
WWE_5
Motif
Other DBs
NCBI-GeneID:
115194198
NCBI-ProteinID:
XP_029609526
Ensembl:
ENSSTUG00000047860
LinkDB
All DBs
Position
5:complement(42346411..42367186)
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AA seq
779 aa
AA seq
DB search
MNNDFNDLLIRLNKKTKYCCTCTEYQHGRRRMLLASAVVVWEWLNEHGRWRPYSPAVSHH
IEAVIRNDPRGGSVVLGQVDSRLSPYIIDLHSMHQFRQDTVLWRDPRLSTVTPGTLRPVR
RSFYDPTSAPGQGWLWEWENDTGSWTAYDTEVGIAIQAARDRQQPWLDLAALGFCYLIDF
QSMTQINGQTQRCRRIQRRSDLAYPLVSGPLPKTHHAWGPSPGGLPGVGVSGVGMGNGNG
SAYPSGALPASAITSLGQPCACQQCMLVLSVKAGAMATAHTLGRRPPQNKLPSPKLGGGY
SAMGGSYSLTLPRPPSSMSRSLSPHRTSAGGASGGVGVGSGFAPSLSLLGSATAALSLTS
TRPPPPPLPPLPPPPPPPPSSIASSAILPPSTSFSMASSGPPSMPAPAPLLISTAASSCT
PSPSARVLGPVSSTAAACAAPLPPRASLAGLSRPALQRIAMAQSRALIASGVPTVPVKNL
NGSSPVHPALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSDIKPVPGLGHCCRKTTK
KQARKGKTPEEVVKRYLQKVRNPPEEDCTICMEALAGPSGYKGPGVGGIQRAESVGRLAQ
CGHQYHLQCLVAMYNNGNKDGSLQCPTCKTIYGVKTGNQPPGKMEYHVIPHSLPGHPDCK
TIRIIYNIPPGIQGPEHPNPGKPFTARGFPRHCYLPDSEKGRKVLKLLLVAWDRRLIFSV
GTSSTTGESDTVIWNEVHHKTEFGSNLTGHGYPDPGHLDNVLEELKAQGITEEECLPRD
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgattttaatgatttattgattcgcttgaacaaaaaaacgaaatattgttgc
acctgtacagaatatcaacatggaaggcgtaggatgttactagcgtcggccgtggtggta
tgggaatggctgaacgagcacgggcgctggcggccttacagcccggccgtctctcaccac
atcgaggcagtcatccgcaacgacccacggggtggtagtgttgtcttaggccaggtggac
tctcgcctctcgccctacatcatcgacttgcattccatgcaccagttccgacaagataca
gttctgtggcgtgaccctcgtctctctaccgttaccccaggtaccctccgaccggtgcgc
cgcagcttctacgaccccacgtcggcgccgggccagggctggctgtgggagtgggagaac
gacacaggctcgtggacagcctacgacacagaggtgggcattgccatccaggcagcacgc
gaccgtcagcagccctggctagacctggcggcactgggcttctgctacctcatcgacttt
cagagcatgacccagatcaacgggcagacgcagcgctgccgccgcatccaacgccgctcc
gacctggcttaccctctggtgtctgggccccttcccaagacacaccacgcctggggacca
agccctggaggactgcctggggtgggggtttccggagtgggcatggggaacgggaacggt
agcgcctaccccagcggcgccctgccggcctctgccatcacatcgctgggccagccctgc
gcctgtcagcaatgcatgctggtcctgagcgtcaaggcaggcgccatggcgacggctcac
accctgggcaggaggccgcctcagaacaagctgcctagccccaaactaggtggtggttac
tcggccatgggggggtcttactcgctgactctcccccgccccccctcctccatgtccagg
tccttgtccccccacaggacgtccgcgggcggggctagcggtggtgtaggggtcggcagc
ggcttcgccccctcgctctccctcctgggttcggccaccgccgcactctccctcacctct
acccggccccctcccccgcctctacccccccttccgcctcctccaccgcctccaccctcc
tccatcgcgtccagtgccattcttcctccctccacttccttctccatggcgtcctccggc
cctccgtcgatgccggcgccggcccctcttctcatctccacggcagcctcctcctgcacc
ccctcaccctctgcccgggtcctggggcccgtgtcttcaacagcggcggcctgtgcagcc
cccctgccgcctcgtgccagcctcgccgggctcagccgacccgccctgcagcgcatcgcc
atggcccagtccagagccctcatcgcctccggtgtcccaacagttcctgtgaagaacctc
aatggatctagccctgtccaccctgcattggcaggtattacagggatcctgatgagcgct
gcaggacttcctgtctgtctgacccgccctcccaagctggtgctccaccccccacccgtt
agcaagagtgacataaagcccgtccccggcctaggccactgctgccgcaagaccaccaag
aagcaggctcgcaaaggcaagacccctgaggaagtagtgaagaggtaccttcagaaggtc
cgcaaccccccagaggaggactgcactatctgcatggaggccctggctgggccctcggga
tacaagggccccggagttgggggaatccagcgggcagagtcggttggtcgcctggctcag
tgtgggcaccagtaccacctgcagtgcttggtggccatgtacaacaacggcaacaaggac
ggcagcctacagtgccctacctgcaagaccatctacggcgtgaagacgggcaaccagcca
ccgggcaagatggagtaccacgtcatcccccactcgctgcccggccaccctgactgcaag
accatccgcatcatctacaacatcccccccggcatccaggggcctgagcacccgaacccg
ggcaagcctttcaccgcccggggattcccccgacactgctacctccctgatagcgagaag
ggacgcaaggtactgaagctgctgctggtggcatgggaccgccggctcatcttctcagtg
ggcacgtccagcaccacgggcgagtcggacacggtcatctggaacgaagtgcatcacaag
actgagtttggctccaacctaacaggccatggctaccccgacccaggccacctggacaac
gttctggaggagcttaaggcccaggggatcacagaggaggagtgcctacccagagactga
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