Salmo trutta (river trout): 115194208
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Entry
115194208 CDS
T08542
Name
(RefSeq) DENN domain-containing protein 4C-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115194208
Membrane trafficking [BR:
stru04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
115194208
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
CA109-like
Motif
Other DBs
NCBI-GeneID:
115194208
NCBI-ProteinID:
XP_029609544
Ensembl:
ENSSTUG00000048007
LinkDB
All DBs
Position
5:42498309..42579529
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AA seq
1972 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPITDLAIINKSAGETVPEGFT
CMESTYSGQQANLNHGSLKSHELFLCYKRDRDKPPLIDIGVLYEGKERLIQGCEVIQATP
YGRCANVNNSSATSQRIFITFRRAPPVQPQNSLAVTDICVIVTSKGETPPHTFCKVDKNL
NCGMWGSSVFLCYKKSVSASNSINYKAGLIFRYPEDDYESFPLSESVPLFCLPMGAKIEC
WAPNTRYPLPVFSTFVLTNSSGEKMYGAAIQFYEAYPIDLLSEKQKVQLGLLTTVEKKMI
PNRTVNTNKCICLLSRWPFFESFRKFLMFLYKLSVSGPHPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLMLAQPVCTPLPLSGADYSTLLMNLGSENCATLLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPFPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKRHSNWKNLPKKPCKSLFNSLANLHHQLGIVRRTAQEGLAVEM
TPIEADFTWHKKMTSLEMEIQEALLRFMANILKGYRSYLKPITQAPSEKATSADSLYDLQ
GFLRSRERTHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCIEKLFPSDKGNDKG
SKVEGESSEDTKLMELDESQKSEHTVFVMPPEPPATEEGSDPPAHYSYKSFPRLCMDLFD
RPREVITALRSSTPGASLSSSPALLAKRTKQEIKLAYKMAKRFYSNPPLWAKCLFSHCYS
LWFICLPVGVRLAQSKSWAMQQAYNVLLKMRTSEVEVLDEVCYRVVMQLCGVYGQPVMAV
RVLVEMKKAGVHPNAITYGYYNKAVLEGPWPSRNRSGLFMWAKVRNVARALSQFKQAVHR
TPAMEGPTVTTTGSDLGPSMGGSASSDGDRLSHGSADSSSEANGEDHTLFTRSLIIGDAA
DNHCSGGVQSDQGYGSKDELHQDLVDLAQSAALVIAVDQCSKSAAQHNGGGIAGSVDSAV
AVAEPPSPVKALPHVPSIVKLSTGASFDTAIKRGDTAPGKLFSLRSQSEDISLPVEGKSA
APGGSGVAGPAVQVQRQKAFSERSCSFSAESRAGMLMEKHGVDHIVSRMGADARILAAAL
SGGGTTPPPTKPLPSAAKALFKDLELESEEGRGPTLGKLSEEEGPVTDPTPLEEGLGKEE
KRMKGDRKEAGGEDEMGLKLEEEDEERDSGGRGSISLPTLEIKEVQVGADPLSLLVSEHE
ELASVTSQELPQSLPAVVSRNLADEIEMYMSLRSPLGPKSCSMELHQEGQGGDPSPDAAP
VKQPLERRSSLPVPPVKHPGGSSGDTTPKRSPAAVTRSKTFAVKASRSPASSRGVVASPR
SSPLTALVRSSQSGSLGSVINSISGMKMDTLLSGPKMDVLKSGMKQAGNLASKVWGAVAS
AYSYSDDEDELGPGYRERDSFPTGLDESMLLGGGGSDSPTHRGPTQGLVSNGLTQSSTSL
GSSSGSSDTGRGPHSTHVTPGRPGRGPDSERSDQGSHHTSSSSIYQNCALEVLMSSCSQC
RSCECLVYDEEIMAGWTADDSNLNTTCPFCRTAFLPLLHVEFHDLRTTTAFYLNPSASGD
SIHSTSHQATATGSTENKVGAAVDTPSPGLISFPESEDPGEAPASQTATHKSLIPEPAQS
DPLGLLEHQAGKRGTSLTRSNSVGGPLQSLVAQREPGHSVSTTSLPCSLIEMDGLGQKRP
NPMPVSVPYLSPLVLRKELETLLENEGDQVIYTHKFLSQHPIIFWNLVFYFQRLDLPSYL
PGLILTSEHCNNGVQLPQTSLSQDSKQVYVQLLWDNINLHQEPGDPLYQSWRTLMEKKGT
LAPTDYQETRTILNSIVRSIQTNDVYGPINLLLREVKRNPEVKRQRGIYREILFLALVAL
GRENIDVEAFDREYRLAFDELSPEQLKALHKIDRPPNTNIQWCLKCFGAPVI
NT seq
5919 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggacaagggccaccgtgtgaccgactactttgtggtggccgggctgacggac
aagtccacgcccctggagcaggacctgtcggagaccaagtccagcgggcccaaggcgccc
attactgacctggccatcatcaacaagtcagcgggcgagactgttcccgagggcttcaca
tgcatggagagcacctacagtgggcagcaggccaacctcaaccacggcagccttaagagc
cacgagctgttcctctgctacaagagggaccgcgacaagcccccgctcatcgacatcggg
gtgttatacgaagggaaggagcgtctcatccagggctgtgaggtcattcaggccacgccg
tacggccgttgtgccaacgtcaacaacagctctgccacctcgcagcgcatcttcatcacc
ttccgccgcgcgccgcccgttcagccccagaactcactggccgtcaccgacatctgcgtc
attgtcactagcaagggagagacgccgccgcacaccttctgcaaggtggacaagaacctc
aactgtggcatgtggggctccagtgttttcctgtgctacaagaaatcagtgtccgcgtcc
aactccatcaattacaaagccggcctcatcttccgctacccagaggatgactatgagtcc
ttccccctgtctgagtctgtgcccctgttctgcctccccatgggggctaagatcgagtgc
tgggcccccaacacacgctaccctctgcccgtcttctccacctttgtgttaaccaactcc
tctggggaaaagatgtacggcgctgccatccagttctacgaggcctaccccatagatctc
ctcagtgagaagcagaaggtgcagctgggcctgctcaccacagtggagaagaagatgatc
cccaaccggacggtcaacaccaacaagtgcatctgcctgctctcccgctggcccttcttc
gagtctttccgcaagttcctcatgttcctctacaagctgtccgtctcgggtccccacccg
ctgcccatcgaaaagcacatctcgcacttcatgcacaacgtgtccttcccttcacctcag
aggcccagaatcttggtccaactctccgcacacgacacattgatgctcgcacaacctgtg
tgtactcctctccctctcagtggggcagactacagtacgttgctgatgaacttgggctcg
gagaactgtgccacgctgctgcactttgtcctgctggagagtaagatcctgcttcactcc
ctgagacccgctgtactcaccggggtagccgaggccgtagtggcgatgatcttcccgttc
cagtggcagtgcccgtacatccccctctgcccgctctccctggcgggggtcctcaacgcc
ccctttccctttatagtgggcgtggattcccgctactttgacctttatgaccccccgccg
gacgtggtctgtgtggacctggacaccaacactatttacctgtctgatgagaagagacac
agtaactggaaaaacctcccaaagaaaccctgcaagagcctgtttaactccctggccaac
ctgcaccaccagctgggcatcgtgcgtcggacagcccaggagggcttggcggtggagatg
acccccatcgaggcggacttcacctggcacaagaagatgacctccctggagatggagatc
caagaggccctgctgcgcttcatggccaacatcctgaagggctaccgctcttacctcaaa
cccatcacccaggccccctccgagaaggccacctccgcagactcactatacgacctacag
gggtttctgaggagcagggagcgcacccaccagaagttctactcccagctgaccaagact
cagatcttcatccgcttcatcgaggagtgcacgttcgtcagcgacaaggacacgggcctg
gccttcttcgacgactgcattgagaagctatttccctccgataaaggcaacgacaaaggc
agtaaggtggagggtgagtcctcagaggacaccaagcttatggaactagacgaatcacag
aagagcgagcacaccgtcttcgtcatgcccccagaaccccccgccaccgaggaagggtcc
gacccccctgcccactacagttataaaagttttcctcggttgtgtatggacctgtttgac
cgccccagggaggtgataacagcgctgaggagtagtacacctggggccagcctgtccagc
agccctgcactactggccaagaggaccaagcaggagatcaagctggcctacaagatggcc
aagcgcttctactccaaccctccgctgtgggccaagtgtctgttcagccactgctacagc
ctgtggttcatctgtctgcccgtgggggtgaggctggctcagtccaagagctgggccatg
caacaggcctacaacgtcctgctcaagatgaggacctctgaggtggaggtgctggatgag
gtgtgttaccgtgtagtgatgcagctgtgtggtgtgtacggtcagcctgtcatggccgtc
cgtgttctggtggagatgaagaaggcaggggtgcaccctaacgctatcacctatggatac
tacaacaaggctgttctggaaggcccctggcccagtcggaaccgcagtgggctcttcatg
tgggccaaggtgcgcaacgtggcgcgcgctctctctcaattcaaacaggcagtccaccgg
acgcccgccatggaagggcccaccgtcaccacgacaggaagtgatttaggcccgtcaatg
ggtggctcggcgagcagcgacggcgaccggctgagccacgggagtgcggacagctccagc
gaggcgaacggagaggatcacaccctgttcacacgcagcctcatcataggagacgccgca
gacaaccactgcagcggaggagttcagtctgatcaaggctacggctctaaagatgagttg
caccaggacctagtggatttggctcaatcagcagcacttgtaatcgctgtggatcagtgc
agcaagtccgcagcacagcacaacggtgggggcatagctggctcggtggacagtgcagtg
gctgtagcggagccccccagccctgtgaaagcactcccacatgtccctagcatcgtcaaa
ctgtccacaggggcgagttttgataccgccataaagagaggagacactgcccctgggaag
ctgttctctctgcgcagccagagcgaggacatctccctgccggttgagggtaagtctgca
gctccgggtggctctggggtggcggggcctgcggtccaggtccagcgccagaaggccttc
tcggagcgcagctgcagcttcagcgccgagagccgtgccggtatgctgatggagaaacat
ggtgtggaccacatcgtcagccgcatgggtgccgatgcacggatcttggcggcggctctc
tctgggggcggcaccacccccccgcctacgaagccgcttcccagtgcggccaaagccctc
tttaaggacctggagttggagtctgaggaggggcggggtccgacgctggggaaactgtca
gaggaggaggggccagtaacggacccaaccccactggaggaggggctaggaaaagaggag
aagaggatgaaaggtgacaggaaggaggcaggaggggaggatgagatgggtctaaagttg
gaggaggaagatgaggaaagagattcagggggcaggggctctatttctctgccaaccttg
gagattaaggaggtgcaggtaggggcagaccccctctccctccttgtctcagagcatgag
gagttagcctccgtaacaagtcaggagctgccgcaatccctgcctgccgtggtgtcccga
aacctggcagacgagattgagatgtatatgagcctccggagcccgcttggccccaaatcc
tgtagcatggagctccaccaggagggccagggaggggacccttccccggatgctgcccca
gtgaagcaacctctagaacggaggtccagcctccccgtgccccctgtcaaacacccaggg
gggtcaagcggggacacgacgcctaaacgcagccccgcagcagtcacacgctccaagacc
ttcgctgtgaaggcctccaggagccctgcctcttccaggggtgttgtggccagcccaagg
tcgtcgccgctgactgccctggtgaggtcgtcgcagagcggttcgctggggtcggtcatc
aattccatctcgggcatgaagatggacaccctgctctcgggtcccaagatggacgtgttg
aagtcaggcatgaagcaggcagggaacctggccagcaaggtgtggggggctgtggcctca
gcctactcttactctgacgacgaggatgaactgggccccggctatagggaaagggacagt
ttccctaccgggctggatgagtccatgctgttggggggtggaggaagtgacagtcccacc
cacagagggcccacccaaggcctggtgtccaacggcctgacccagagcagcaccagcctg
ggcagcagcagtgggagcagtgacacagggagaggaccccactccacacatgtgactcca
ggaaggccaggcagaggtccagactctgagaggtcagaccaaggatcccaccacaccagc
tcctctagtatctaccagaactgtgccctggaggtgctgatgtccagctgctcccagtgt
cgatcctgtgagtgtctggtgtacgatgaggagatcatggcgggctggacggcagacgat
tccaacctcaacaccacctgtcccttctgccgcaccgccttcctgcccctgctccacgtc
gagttccacgacctgcgcaccaccacagcgttctacctgaaccccagcgcatcaggagac
agtatccacagcaccagccaccaggccacagctacaggctccaccgagaacaaggtaggg
gctgcagtggacaccccgagcccgggcctcatcagcttcccagaatctgaggacccagga
gaggccccggccagccagactgccacgcacaagagtttgataccggagccggctcaatcg
gatcccctgggcctgctagagcaccaggcagggaagagggggacgtctctgacacgcagc
aacagtgtgggcgggcctctacagagcctggttgcccagagagaaccaggacacagcgtc
tccaccaccagcctgccttgcagcctgatagagatggatggcctgggacagaagcggccc
aacccaatgccggtgtctgtgccctacctcagccccctggtcctccgcaaagaactagag
accctactggagaacgagggagaccaagtcatctacacccacaagttcctgagccagcac
cccatcatattctggaacctggtgttttatttccagcgcctggatctgcccagctacctg
cctggcctcatcctcacctcagaacactgtaacaatggagtacagctcccccagacatcc
ctgtctcaagacagtaaacaagtgtatgttcagctgctgtgggacaacatcaatttgcac
caggaacctggggatcccctctaccagagctggaggaccctgatggagaagaagggcacc
ctggcccccacggactaccaggagacacggaccatcttgaacagcatcgtccgcagcatc
cagaccaacgacgtctacggccccatcaacctgcttctccgggaggtcaagaggaaccca
gaggtcaaacgccaaaggggaatctatagggagatcctcttcctggcgctggtggcattg
ggacgggagaacattgacgtcgaggcttttgaccgtgaataccgcctggcctttgatgag
ctgagcccagagcagctcaaggccctgcacaagatcgaccggccacccaacaccaacatc
cagtggtgcctgaagtgcttcggtgctccagtcatctga
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