Salmo trutta (river trout): 115194232
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Entry
115194232 CDS
T08542
Symbol
frem1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
stru
Salmo trutta (river trout)
Pathway
stru04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115194232 (frem1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
stru04091
]
115194232 (frem1)
Lectins [BR:
stru04091
]
C-Type lectins
Lecticans
115194232 (frem1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
Big_9
Motif
Other DBs
NCBI-GeneID:
115194232
NCBI-ProteinID:
XP_029609605
Ensembl:
ENSSTUG00000001292
LinkDB
All DBs
Position
5:43383022..43412583
Genome browser
AA seq
2201 aa
AA seq
DB search
MGLQRGALRWALPWLLLLVVAGGSHGSLVKTNLGLRVKRGQSAYLQEGDLQFHIPRVKDA
CKVEVVLNEPITQRVGTLTPQVFDCHYLADDVKYVHNGCPILKEDTVKLRLYRFTETETF
TEVFFLRVEVMEPDCNIIKLGPKSLVVPEFYGLSDTLDGNVVSFHYERMTSLECNIRVNT
HETHLPGHGQLVIGEPDQLEARGDEPESFIPLRQQLDNKARAMCKTEDCLKGLKLAKVTK
VPCDEFLVMGLRYQHIDPPSPDVDYIALRLDLTDTRSGSIYKSERAWIPVHIPGAVPNQP
PKPAFMSMFILEVDQFILTPLSTATLDAEDGETPKQLLVFNITKPPLEGFITHLSDHTRP
IFSFTWVDLNDMLIGYQPPNSSHTQRRNYEVEFEVHDFFFEKSAPIMVHMSVRTADTNAP
RVSWNMGLSLLEGQSRPITWDQLQIVDNDNFKAVRIITVDGLHHGRLTLRGGKGFMFTIA
DILAGAVRYHHDDSDTTKDFIIFRITDGRHQTRHKFPINILPKDDSPPFLITNTVLELSE
GHTALLRGSILQASDMDSSDDYILFNITRPPQAGELMKIPGPGLTGYPVSRFLQKDLFHS
VVYYRHLGNEVFDDSFEVVLSDFNDPPNLSEPQVIVVHINPVPDQPPKEVPGVTRCLVVK
ETEVVHLTKKQLHFIDLESPDSELTYTVTSPPFYSRSYGGHDAGRLFLVDSIAKFTKDPE
APVLRLFTQHAVNYMKVAYMPPILDIGPYPQHIQLVLSVTNQQGTTVAGICFNITVVPVD
NLAPEVHMKPLTVDEGGECWVGPDHLLLTDHDSTEESLRVELKREPQHGAVQLDGVPMKP
SQNFTVRDLKSLKVRYHHDSSETVGDAIELIATDGINAINFVLEVKVTLINDEVPVLMPG
LKPVLDCAEGQEVIITAEYIYATDADSDDNSLTYMIARQPYHGVVRKNAIVVDRFIQADI
VAGSITYEHTGAEIGLAPRHDTITFVISDGQAENVPSCCNDRGDTLKRGRTQVQESLPLY
DLKVTVFPVDSQMPSIATGDVFVVDEGGVGPITVAHLSASDVDTPLEELVISLVSPPQYG
YIENILPSPGFEKSNTGISIASFSYSDIMNGHVNYVQSRHQRIEPTADQFMLCVSDGKHT
SAHVHFYIIINPINDEVPEFLARNITVREGHMKELDPAVINAVDLDVPKNNLLFSVVQAP
QHGTIMGRTYGNDVPANGRPFNRHRDAEVVVQDFTMQELRNGMSLMYMHDDSENMVDSFT
IHLTDGKHQLQRHVMVNVLPVNDEEPRVIRNNGLEVEAGEARLISSAILFAQDSDTTSQE
IVYMLESVPTQGLLQVKVGSDWLTQSAGMNCTQETVDMNLLRYLHTGPLGHTQDFFMFYL
LDGKNRSPAQHFHISLKDMEKGNIAVFVKPVKTSRGERVVLTTDVLLATDGTDKPEELFY
IVTVPPGNGHMEYIKHPGVTISTFSQLDIAANLVGYVHDNRATASLETLQFVVSNGKATR
NGTLEIFVETTDRVLPSLACNSGLRVPQESSMAVTPDVLALSDPDTPPSDLLFFLAQPPQ
YGTLLRGGVPLAAGGNFTQWDLQELEVTYRHGGGPSQIDRFAFTASDTTNRSFLLEGRVQ
TEPVIFTIQIEPLDSSAPEVVQLQSLWKAEVLSDGRYGIYLSSRELRAQDGNTKDEDLTF
HIHRPPYFGYLENTIKGSFIQQRFTQRDLSKRTIVYIIDPATEALSDSLEFKVSDPLGNT
GPSHTLKVKWSRVELAVSEYQACEDQGTVSLDVLRKGNMAESSYITIKVREVTATAGKDF
TLSPSSLIQFDPGVSKRSWRIEITQDHLEEAEETFEVTLVSPEGTVVGSTSKALVKIKDS
GKGQCGSSRAPVGSSLGGKQVQSGPYPQHGSIHLETLPLAKGDQQMTWTRGDGMPQSVPA
AVPATPNMKLRAMANRKTIPPSSVHRNGTDTVFTYHGIMSVHLEDDKSPSRKGRKANIQV
TSRGQQQHAAAAPPVAPNLNPKPVPKTKSDSLLPRTMTEQPNKEASPSSGPKPCVPELMG
LLHFNQSSGGLLRCNGVSWKPWAPTDEMVSAQNCRKGWTYHSGYCYFLSTERKSSWSTAI
KACRESHQANLVSVFSKADMDWLWDFSGRKPFWIGLNDRESRGRWEWVGGEPITYTNWRK
SPASGKRKGTRRCVLVWRRAKWQIRDCKTGRGHLYMCYIKT
NT seq
6606 nt
NT seq
+upstream
nt +downstream
nt
atgggtttacaaagaggggcactgcgatgggcacttccctggctgctgctgctagtcgtg
gctggagggtcacacggctccctggtgaagactaacctagggttgagggtgaagaggggc
cagtcggcctacctgcaggagggggacctgcagttccacatcccccgggtgaaggacgcc
tgcaaggtggaggtggtgctcaacgagccaattacgcagagggtggggacgctgacacct
caggtatttgactgccactacctggctgatgacgtaaagtatgttcacaatggctgcccg
atactaaaggaagatactgtcaagcttcgactctacaggttcacagagacagagaccttt
acggaggtcttcttcctgcgtgtggaggtcatggaacccgactgcaacatcattaaactg
gggcccaagtccctggtggtgccagagttctacggcctgtccgacacgctggatggcaac
gtggtgtccttccactatgagaggatgaccagtcttgagtgtaacatccgtgtgaacacc
catgagacacacctcccgggtcatggtcagttggtcattggggagccagaccagctggag
gccagaggggacgagccggagagcttcattcctctccggcagcagctagataacaaggcc
agggccatgtgtaagactgaggactgcctgaagggcctgaagctggcaaaggttaccaaa
gtgccctgtgatgagttcctggtgatgggcctgaggtaccagcacatagacccaccgtct
ccagacgtggactacatcgccctccgactggacctcaccgacaccaggagcgggagcata
tacaagtcagagcgggcctggatacctgtccacatccctggcgcagttcccaaccagccg
cccaagccagccttcatgtccatgtttatcctggaagtggaccaattcatcctcacgccc
ctctccaccgccaccctggacgcagaggacggagagacccccaaacagctgcttgtgttc
aacatcaccaagccccccctagagggcttcatcacccacctgtcagaccacacgcgaccc
atcttctccttcacctgggtggacctcaatgacatgcttatcggctaccagccacccaac
tcctcccacacccagcgtaggaactatgaggtggagtttgaggtacatgacttcttcttt
gagaagagcgccccgatcatggtccacatgtcagttagaacagcagacaccaatgcaccc
agggtgtcatggaacatgggtcttagtcttcttgaaggtcagtctcgtccaatcacgtgg
gatcagctccagattgtggacaacgacaacttcaaggctgtacgcatcatcactgtcgac
ggcctccatcatggcaggctaacactgagaggtggcaagggtttcatgttcaccatcgcc
gacatcctcgcgggcgccgtgcgctaccatcacgacgacagcgacaccaccaaggacttc
atcatcttccgcatcaccgatgggcgccaccagacccggcacaagttccccatcaacatc
ctgcccaaggatgacagcccaccattcctcatcaccaacacagtgctggagctgtctgag
ggccacacggccctgctgagaggatccatactgcaggcctcagacatggactcaagcgac
gactacatcctgttcaacatcacccggccaccgcaagctggagagctcatgaagatccct
ggtcctggactcaccggttatccagtcagccgtttcctgcagaaggacctgttccactcc
gtggtctactaccgccatctagggaatgaggtgtttgatgactccttcgaagtggtgctc
tcggacttcaatgacccacccaacctttcagaacctcaggtcatagtggtgcacatcaac
cctgtgcctgaccagccacctaaagaggtccctggggtgactcggtgcctggtggtcaaa
gagacagaggtggtccacctgaccaagaagcagcttcacttcatcgatctggagtcccct
gacagcgagctcacatacactgttacctctccgcccttctacagcaggtcttatgggggc
catgatgcagggaggctgttcctggttgacagcattgccaaattcaccaaggatcctgaa
gccccagtgttaaggttattcacacagcatgcagtcaactacatgaaagtggcctacatg
cctcccatcctggacattgggccttacccgcagcacatccagttggtgctctccgtcacc
aaccagcagggaaccacagtcgctggcatctgcttcaatattactgtggtgccagtggac
aacctggccccagaggtgcacatgaaacctctgacagtggacgagggtggggagtgctgg
gtgggtccagaccacctgctgctgacagaccatgactctacagaggagagtctgagagtg
gagctgaagagagagcctcagcacggagctgttcagctggatggcgttcccatgaaaccg
agccagaacttcactgttcgcgacctgaaaagcctaaaagttagatatcatcacgacagc
tcggaaacagtgggcgatgccattgaattaatcgctaccgatgggattaacgcaatcaac
tttgttctggaagttaaggtgacactgattaatgatgaggttccagttctcatgccaggt
ctgaaacctgttctggactgtgcagagggacaggaagtcatcatcaccgctgagtacatc
tatgccacggacgcagacagtgacgacaacagtctgacctacatgattgcccgccagcca
taccatggcgtggtgcgcaaaaacgccattgtggtcgatcgcttcattcaggcagacatt
gtcgcagggagtatcacctacgaacacacaggagcggagattggactagcccctcgacac
gacacaatcacgtttgtgatatccgacggccaggcggagaacgttccgtcatgctgtaat
gaccgaggggacacattgaaaagaggcaggacacaagtccaggagagcctgcctctgtat
gacctgaaggtcaccgtgttccctgtggacagtcagatgccttctattgcaacaggagat
gtgtttgtggtggatgaggggggtgtgggccctataaccgtagcccacctcagtgcctcg
gatgtggacactcctctggaggagctggtgatcagcctggtctctcctccccagtatggc
tacatagagaatatcctgcccagtcctggatttgagaaaagcaacacaggcatcagcatc
gcctccttctcttacagtgacatcatgaacggacatgtgaactacgtccagtccagacac
cagaggatcgagccaaccgctgaccagttcatgctctgtgtctctgatgggaaacacacc
tctgcccacgtccacttctacatcatcatcaaccccatcaatgacgaggtcccggagttt
ctcgccagaaatatcacggtgcgagagggccatatgaaggagctggaccctgctgttata
aacgcggtggatctggacgtccctaagaacaacctgctgttcagcgtggtccaggccccc
cagcatggcaccatcatgggccgaacgtatggcaacgacgtgcccgccaatggaagaccc
ttcaacaggcacagggacgcagaggtggtggtccaggacttcaccatgcaggagttgagg
aatggtatgtctctgatgtacatgcacgatgactctgagaacatggtggacagcttcacc
atccatctgaccgatgggaaacaccagctccagaggcacgtgatggtcaacgtactccct
gtcaatgatgaggagcctcgagtcatcaggaacaatggactggaggtggaggcaggcgag
gctaggctgatctccagtgctattctctttgctcaggacagcgacactacctctcaggag
atagtctacatgttggagagcgttcccactcagggactgctacaggttaaggtaggctct
gactggctgacccagtctgcggggatgaactgcacccaggagacagtggacatgaacctg
ctgcgctacctccataccgggccactgggacacacacaggatttctttatgttctacctg
ctggacgggaagaaccgctcccccgcgcagcacttccacatctccctcaaggacatggag
aaaggaaacattgccgtttttgtgaagccggtgaagaccagccgcggtgagcgcgtggtt
ctgaccacggatgtcctgctggcgacggacggtacagacaaacccgaggagctgttctac
atcgttacggtcccccccggcaatggccacatggagtacatcaaacaccctggggtgacc
atcagcactttcagccagttggacatcgctgccaacctggtgggctacgtccacgacaac
agggccaccgcgtcgctggagacactacagttcgtcgtcagcaacggcaaggccacccgt
aacggcaccttggagattttcgttgagaccacagaccgcgtgctgccatcactggcctgt
aacagcggcttgagagtccctcaggagtcctccatggcggtgacgcctgacgtcctcgcc
ttgtccgaccccgacaccccacccagtgacctgctcttcttcctggcccagcctccgcag
tacggcaccttgctccggggcggtgtcccgctcgctgccgggggtaacttcacccagtgg
gatctgcaggagctggaggtgacctacaggcacgggggcggcccgtcgcagatcgaccgc
tttgccttcacggcctcagacactaccaacaggagtttcctgctggaggggagggtacag
acggaacctgttatctttaccattcagattgagcctttggacagctcggctcctgaggtt
gtgcagctgcagtctctgtggaaggcggaagtcctgtctgacggtcgctatgggatctac
ctctcgtcccgggagctgagagcgcaggacggcaacaccaaggacgaagacctcaccttc
cacatccacagaccaccatactttggctacctggagaatactattaaaggcagctttatc
cagcagcgtttcactcagagggacctgagcaaaaggactatcgtgtatatcatagaccca
gcgacagaagccctgtcggacagcctggagttcaaagtgtccgaccctctggggaacact
gggccctcccacacactgaaagtgaagtggtctcgtgtggagctggctgtgtctgagtac
caggcatgtgaggaccagggcacggtctcactggacgtcctacggaaaggcaacatggcc
gagtcctcgtacatcaccatcaaggtgagagaggtcacagcgactgctggaaaggatttc
actctgagcccgtccagcctaatccagtttgatcctggtgtatccaaaaggagctggcgt
attgagattacccaagatcacctggaggaggcagaggagacatttgaagtgacactggtg
tcccctgagggaaccgtagtaggcagcacctccaaagctctggttaaaatcaaggactct
gggaaaggacagtgtggatccagtcgggcccctgtgggctccagtctgggggggaagcag
gttcagtcagggccctacccccaacatggctccattcatttggagacactgccccttgcc
aaaggagaccagcagatgacctggacccggggcgatggtatgccccagtctgtgcccgct
gctgtgcccgccacgcccaatatgaaactcagagccatggccaatagaaagacaattcca
ccatcatcagtccatcgtaatggaacagacactgtgttcacgtaccacgggatcatgtcc
gtgcacctggaggatgacaagtctccgtctaggaagggaaggaaggctaatattcaggtg
accagcagagggcagcagcagcatgcagcagcagcaccaccagtggctcccaacctcaac
cctaaacctgtccctaagacgaagagtgacagcttgctcccacgaacaatgactgagcag
cccaataaggaggcttcacctagctctggccctaaaccctgtgtcccagagctgatgggg
ctcctacactttaaccagagctcaggcgggctcctccgctgcaacggggtctcctggaag
ccctgggctcccactgatgagatggtcagtgctcagaattgtcgtaagggctggacctat
cacagcggctactgctacttcctgagcaccgagcgcaagtcgtcgtggagcaccgccatc
aaggcatgcagggagagtcaccaagccaatctggtgagcgttttttccaaggcagacatg
gactggctgtgggacttcagtggaaggaagccattctggataggtctaaacgacagggag
agccgaggacgctgggagtgggtgggtggagaacccatcacctacaccaactggaggaag
agtccagccagtggcaagaggaaggggaccaggaggtgtgttctggtgtggaggagggcc
aagtggcagatcagagactgtaagacgggcaggggtcatctctacatgtgttacatcaag
acgtga
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integrated database retrieval system
