Salmo trutta (river trout): 115194244
Help
Entry
115194244 CDS
T08542
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-alpha-like isoform X1
KO
K07202
alpha peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru04371
Apelin signaling pathway
stru04910
Insulin signaling pathway
stru04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
115194244
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
115194244
04920 Adipocytokine signaling pathway
115194244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
stru03029
]
115194244
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
115194244
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
115194244
NCBI-ProteinID:
XP_029609623
Ensembl:
ENSSTUG00000002234
LinkDB
All DBs
Position
5:44012534..44053699
Genome browser
AA seq
1282 aa
AA seq
DB search
MAWDRCNQDSVWRELECAALVGEDQPLCPDLPELDLSELDVSDLDADSFLGGLKWYSDQS
EIISSQYGNEASNLFEKIDEENEANLLAVLTETLDSIPVDEDGLPSFEALADGDVTNASD
QSCPCTPNGSPHTPEPEEPSLLKKLLLAPANSQLSYNQYIGDKAQNHAASNHRIRPTPAV
VKTEISWNSKPRGGCPQQSRLVRRPCTELLKYLTATDDILLQTKASDAKSAWGGGGKDKG
GLLGASSSTSSSPSSSSTSSFSSLSSSSSIASKKKSSSSSVVSQQQQQQHHQRGEAAGEC
SVAGVGAGKWRRCAHGAGGAEGQSEPAAAPAPVPPTRRNGSGHARPKLERRPSSEEGRPP
GPQPAVDAGRLAAARFIRYMHSYSLLPRETGQTGSCGRCPEVGTATQASECWGGHGRGAA
ARRHITVTIKKREEEPGHPLLSQLLTSKQRPASYRAHLLLPATTPQPRKSSSSRMSSGVL
ERDQCPSQAIEVEEKYRGTVNINPGSWGLRQAKEPDSDPLLAESLGLGSWVSQPDQGLDL
GLELGLGWPEVGLVEQAGCFGEEVRDDDDAMGSPMVLSQGLPSPLFPDSRIPDPTPSVTQ
GQQHLHMQAVCRHPDDQGLLLLAKPTTLPLPLTPESPNDHKGSPFESKTIERTLSVEISG
TPGLTPPTTPPHKASQENPFKASLKTKLSSCSSSALACKRVRLSEAGPCGPPALTPTLGG
GPSRKGPEQTELYAQLSKASTALPNSVVTATTGGCQEEHRGGNGKRGAQPRGFSDHDYCQ
STAASTKRDADANAANAAYTTVTMTTTTTTPLMPNPVMAEDRHVKCKDSAMPPSSFSSSS
SSTSSPTSSSSLAKQLQQSSYPVATEAQGQDARGQDRTPTTQTRAPPSQTPDGDQHSTSR
KQPLRDQEIRAELNKHFGRPQQAIYSQGEKGGELVVEEGGQGGGEKVVAPQVSEENPAGD
EYYCKLPGSGSTGYLHPGLPPFHEELELQDRGVEGRYLYPWEGTPLELLFESCSPSCSPS
SCSPSRGSVSPLSSLLLSPRHFVWPRSGSPSSRSRSRSRSFSSHHRRRSLSSSPDGRPSS
RSRHNMDSSTYRSRTHKSPHSQSRSQSRSPLSRRPRYDSYEEYQHERLKREEYRQDYQKR
ESQRAEQRERQSEKAIQEERRVVYVGRLRSDSTRTELKRRFEVFGEIEECAVNLRDDGDN
FGFITYRYTCDAFAALENGHTLRRSNEPQFELCFGGQKQFCKSNYTDLDSHSDDFDPAST
KSKYDSMDFDSLLREAQRSLRR
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgggacaggtgtaaccaggactcggtctggagagaattagagtgtgctgccttg
gttggcgaagaccaacccctctgtccggacctccccgaactcgacctctcagagcttgat
gtcagtgacctggatgcggacagcttcctgggcgggctcaagtggtacagtgaccaatca
gagatcatttccagtcaatatggcaacgaggcttccaacctctttgagaagatagatgag
gaaaatgaggccaacttgctggcagtgcttacagaaacgctggacagcatcccagtggac
gaggacggattgccttcgttcgaggccctggcagatggggacgtgaccaatgccagcgac
cagagctgtccctgtacccccaacggttcgccgcacacccccgaaccagaggagccctcc
ttgctgaagaagctccttctggcgcccgcaaactcccagctcagctataatcaatacata
ggcgacaaggcacaaaaccatgcagccagcaaccaccggatcagaccaacacctgctgtt
gtcaagacggagatctcctggaacagcaagccgagggggggctgtccgcagcagagccgt
ctagtgaggcgcccgtgcaccgagctgctcaagtacctgactgccactgacgacatcctc
ctccagaccaaagccagcgacgccaagagcgcctgggggggtggcggcaaagacaagggc
ggcctgctgggcgcctcctcctccacctcctcgtcgccgtcctcctcctccacctcctct
ttctcctccctctcctcctcctcctctatcgcctccaagaagaagtcgtcctcgtcgtcc
gttgtgtcgcaacagcagcagcagcagcatcaccagcgaggtgaggctgctggcgagtgt
agtgtggctggtgtgggggctgggaagtggcgtcgttgcgctcatggggctggtggcgct
gagggacagtccgaacccgcggcggcacccgctcctgtccccccaacacgtaggaacggc
agtggccatgcccgccccaaactggagcgcaggccgtccagtgaagaaggaaggccgcca
ggtccgcagcctgcggtggacgcggggcgcctggcagccgctaggttcattaggtacatg
cattcttattctctccttcctagagagacgggtcagacaggcagctgtgggcgttgccct
gaggtgggcactgccactcaggctagcgagtgctggggcgggcatggccgtggtgcggca
gcgcgtaggcacatcacagtgaccataaagaaaagagaggaggagccggggcatccgttg
cttagccagctgctgacctccaagcagaggcccgccagctatcgggcccacttgctcctg
cccgctactacccctcagccccgcaagagcagttcatcaagaatgagctctggagtcctg
gagagggatcagtgtcccagccaggctattgaggtggaggagaagtacagagggactgtc
aatatcaatcccggcagctggggtctcagacaggccaaggagcctgattcggaccctctg
ttggccgagagcttaggcctaggcagctgggttagccagccagaccaggggctagatttg
gggctggagctgggcttgggttggccggaggttggcctggtggagcaggctggctgtttc
ggggaggaggtccgcgatgatgatgatgccatgggcagccccatggtgctctcacagggc
ctgccaagcccactcttcccagattctagaattccagaccccactccctccgtcacacaa
gggcagcagcacctacacatgcaggcagtctgcaggcaccccgatgaccagggcctcctg
ttgttagccaaaccaaccaccttgccacttcctttgaccccagagtctccaaatgaccac
aagggatcaccgtttgagagcaaaaccattgaacgcacattgagtgtggagatctctgga
accccaggtctgacaccacctaccacgcccccccacaaagccagtcaagagaaccctttc
aaagcatcactcaaaaccaagttgtcttcatgctcctcatctgccctggcgtgcaagagg
gttcggctgagcgaggcgggcccctgcggccccccggccctaaccccgaccctaggtggg
ggtccctccaggaagggcccggagcagactgagctgtatgcccagctgagcaaagcgtcc
actgccctccccaactcagtggtcaccgcaacgacagggggttgccaggaggagcaccgc
ggcggcaacggcaagcggggtgcccagccccgcggcttcagcgaccacgactattgtcag
tcgacggcggccagcacaaaacgggacgctgacgctaatgcggctaacgcagcttatact
actgttaccatgacgactactacgacaacccctctgatgcccaatccggtcatggcggag
gacaggcatgtgaaatgtaaggactcagccatgccaccctcctccttttcttcctcctcc
tcttctacatcttctcctacatcttcatcctctttggccaagcagcttcagcagagctct
taccctgtggctacggaggctcaggggcaggacgctcggggacaggaccggacccccacc
acccagacaagagcacccccatcacagaccccagatggggaccagcattccaccagcagg
aagcagcccctgcgagaccaggagatccgggcggagctcaacaagcactttggccgcccc
cagcaagccatttacagccagggtgagaaggggggggaattggtggtggaggaggggggt
cagggaggaggggagaaggttgtagccccgcaggtgtccgaggagaaccctgctggggac
gagtactactgcaagctccctggttctggttctactgggtacctgcacccgggcctcccg
cccttccacgaggaacttgagctccaggaccgtggcgtggaggggcgctacctctacccc
tgggagggcacccccctggaactgcttttcgagtcctgctcgccgtcctgctcgccgtcc
agctgctccccctcacggggctccgtctcgcccctctcctccctcctcctctcccccaga
cactttgtctggccccgctcgggctccccctcctcccgctcccgctcccggtcccgaagt
ttctcctcccaccaccggaggcgctccctttccagctcacccgacggacgcccctcctcc
aggtctcgtcataacatggactccagcacttaccgatccaggacccacaaaagccctcac
tcgcagtctcgatctcagtccagatcccccctcagccgcaggccaaggtacgacagctac
gaggaataccaacacgagcgtctgaagcgggaggagtatcgccaggactaccagaagaga
gagtcccagagggccgagcagagggagaggcaaagtgaaaaagcaatacaggaggagaga
cgggtggtgtacgtggggagactgaggtccgacagcacgcgaaccgagctaaagcggcgt
tttgaagtcttcggcgagatcgaagagtgtgccgtgaacctgagagatgacggggacaat
tttggtttcatcacctaccgctacacttgtgacgccttcgctgcccttgaaaacggacac
accttgcgccggtcaaacgagccccagttcgagctgtgcttcggtggacaaaagcagttc
tgcaaatcgaattatacagacttggattcccattctgacgactttgatccagcctccact
aaaagcaagtatgactccatggattttgacagcttgctgagagaggcccagcgcagcttg
agaaggtaa
DBGET
integrated database retrieval system
