Salmo trutta (river trout): 115194251 Help Entry 115194251         CDS       T08542                                  Name (RefSeq) synaptopodin-2-like isoform X1   KO K24066   synaptopodin-2 Organism stru  Salmo trutta (river trout) Pathway stru04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:stru00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     115194251  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:stru04990]     115194251 Domain-containing proteins not elsewhere classified [BR:stru04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    115194251 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PDZ PDZ_6 Motif Other DBs NCBI-GeneID:  115194251 NCBI-ProteinID:  XP_029609639 Ensembl:  ENSSTUG00000005339 LinkDB All DBs Position 5:44616672..44677504 Genome browser AA seq 1646 aa AA seqDB search MGTGDYICVTVRGGAPWGFSLCEGEGDAHRPLQVYQVEEGGRASLAGVCEGDEVVSLNGE PCGDLSLPEAIALIDACVDRLQLLVKRCCALTPEAFNSEETYFGTRESSGEALESTNLRI LSLGRSQPPRELYIVESQDEAYYGETESDTEAARGTQLVHTQLCVPAPGECSGPESQLLG GGGDGGRAGPQGGGFSPGAMVELQLSLSEHTLEDPVCTSLGSALGIEGEIQAREALQNKA LLHTTTHSLYVCGPAREPLSQHGVVEITLQHPAAGRGSPRLVEGACGASGNVGGASREEG AGQSQGAPASFTVSFGIPKEGAEPAEEPDSDSEKDLGKPNKHRARHARLRRSESLSDKQV KEAKSKCKRIAILLNADAPNPNNKGVLMFKRHRQRAKKYTLVSYGTGESEPEYEDDDSEE EEDYVEKDPRAIKFTLVATTSESELDEDFITNAHGGGRVITCDWDTGLLKIERKLNSGEE MEQLPNTMGKGATMFSQRRQRMDEIAAEHEEMRRQGIPVEGVQEVEKHAAYQQMEERSYM QATTESQAYMDVNVHQKQQYQQFQEQQYYEQQHQQQQQYQQQQQYQQQQQYEQQQYNQQQ QYQQQQYQQQQQYHQQQQIQQYSSNMNGVANHQSNEMQSSMSNRTPQSFSVQNQVPVPFL PPVSGNNQEAMSQGEQIASRDERISTPAIKSGILQDTRNRFKGKPMFNFKQAPKVPPNPE LMNLLNRSDKKLDFESATEEDYLSLGAEACNFLQSPRVKHKTPPPVAPKPIINPNSPPWS PQPELANQELPLHAENSVPAPATASEPESAPELDPTPVPAPEPSPPLAPQEVPANTPSPE KHTWSPPGSQAEQQPQQAPAWGRNGPSPPQPHSQPEPQVSSKAPAHTQAQQQPPVSTWTP AEMKPQAPAPSQSPPQLPWVTPQPPPPQPQAQPQPPINYWAAQPQWAQPQEQAQAQPPWV QPQEQVQQQPLSPWAQPQEQVQQQPQPPWTQPQEQAEVQPPWVQPQEQVQQQPQPPWAQP QEQVQQQPQPPWAQPQEQAQAQPPWVQPQVQQQPQPPWAQPQEQVQQQPQPPWVQPQEHV QQQPQPPWGQQPQPPQQAWPQAQAQPQPPWVSSPQPPMNAWTPPQSQAQPPQPPWAQSAQ PQPTAQPQPHMNTWAQAPAQAQAQLPINAWTPDQNQVQPQSHWAQTTPTQSPSQQSWQQP PPQQTPPQQTPPQPPMNAWAPAQAQPQTHTSTWAPQPQQAPVNTQTPMDRVAQPSPKPGN APQNAPRSIPPPRPQRMNSYTLGERSSSPLINPMASVLVPVRGMGSALSMPAVTGKGADL FAKRQSRMEKYVVDSDTVLAATAQAAQQAQAATAQENKARSTSPSPSVPHSWKYSPNCRA PPTSNYNPIQSPSYPPGAIKQPPPSSPAAKAKKGKGKPACKPLAVIDVMKHQPYQLNASL FTYGPAVEAAEAAKAAAPKPAPAPAPVPPNQNQPVRYEQLSPVQPAGPMNAAYPQQPQHP QQPYGMPPQPHMHDSPYHQVPPNAYQTPNNPYQQAPAGPYQQPYNPLYQQAPPAPYLPQH HPQPQAPNPSYQPTPQGPYQPAHSPTYQAAPQAPYQPLPPSTYVVPSFPIAAKPESISGG STAPKPRFMAKKSSAQVWKPAAVDKE NT seq 4941 nt NT seq  +upstreamnt  +downstreamnt atgggcactggggattatatttgtgtaacggtgcgcggaggcgcgccctggggcttcagt ctctgcgaaggagagggggatgcccaccgacctttgcaggtttatcaggtggaagagggg ggtcgtgcgtccctggccggggtttgtgagggggatgaggtggtgtcgctgaatggagaa ccctgcggtgacctttccctcccagaagctattgctctgattgacgcctgcgtcgaccgc ctgcaattactggtcaaaagatgctgcgcactaacccccgaggcatttaattcagaggag acctactttggcacaagggagtcctctggtgaggctttggaaagcaccaacctccgcatc ctgtcccttggcaggtcccaaccacccagagagctctacatcgttgagtcccaggatgag gcctactacggggagacagagagtgacacggaggccgccagagggacccagctggtccat acccagctctgcgtgcccgcacctggggagtgcagcggcccagagtcccagttactcgga gggggaggggacggaggtcgagcgggaccccagggagggggtttctccccaggggcaatg gtggagctccagttgtccctctctgaacacaccctggaggatcctgtctgcacctccctg gggagtgctcttggaatagagggggagatccaggcgagagaggccctccagaacaaggcc ctcctccataccaccacccactcgctctacgtctgtggcccagctagggagcccctgagt cagcatggagtggtggagatcaccctgcagcatcctgcagccggaaggggttctccacgt ctggtagagggtgcctgtggggccagtggaaatgttggtggagcctccagggaggaagga gcagggcaaagccagggagctcctgcctccttcactgtctccttcggaattcccaaagag ggtgccgagccggcagaggagccagactcggattcggagaaggaccttgggaaacccaac aagcaccgggccaggcacgccaggctcaggcgcagtgagagcctgtcagacaagcaggtg aaggaggccaagtctaaatgtaagcgcattgctattcttctgaacgctgacgctcccaac cccaacaacaagggggtgttgatgtttaagaggcatcgacagagggccaagaagtacaca ctcgtcagctacggcactggtgagagcgaacctgagtacgaggacgacgacagcgaggag gaggaagattacgtggaaaaagacccccgagcgatcaaatttaccctcgtagccaccacc agcgagtcagagcttgacgaggacttcattactaatgcccatggtggaggcagagtgata acctgcgactgggacacgggactactcaagatcgagcgcaagctcaattccggggaagag atggagcaactgcccaacaccatgggcaagggggccacaatgttttcccagcgccgccag cgcatggacgagatcgctgccgaacatgaggagatgaggcgccaggggattcctgtggag ggagtgcaggaggtagagaagcatgcagcctaccagcagatggaggagcgctcgtacatg caggccaccacagagagccaggcctacatggatgtgaacgtgcaccagaagcaacagtat cagcagttccaagagcagcagtattacgagcagcaacaccagcagcagcagcaataccag cagcagcagcaataccagcagcaacaacagtatgagcagcagcaatacaaccagcagcag caataccagcagcaacaatatcaacaacagcagcagtaccaccagcagcagcaaattcaa cagtactcgtctaacatgaacggtgtcgccaaccaccaaagcaatgaaatgcagagttcc atgagcaatcgtaccccccaatccttctcggtacaaaaccaggtgcccgttccatttctt cccccagtgagtgggaacaaccaagaagcgatgagtcagggggagcagattgcctcgcgc gacgagcgcatttcaaccccggctattaagtctgggattttgcaggacacaaggaacaga ttcaagggcaagccaatgttcaatttcaaacaggctcccaaagtgccacccaacccggag cttatgaatctcctcaacaggagtgacaagaagttggatttcgagtccgctacggaggag gactaccttagcttgggggctgaggcctgcaactttctccagtcaccaagggtcaaacat aaaacgcctccaccagtcgctcccaagcctatcattaaccccaactctccgccttggtcc cctcagcctgagctggccaaccaggagttgccactgcatgctgaaaatagtgtccctgca cctgctacagcctccgagccggagtccgctccagaactggatccaacccctgtcccggct ccagaaccttccccccctcttgcaccccaggaagttcctgccaacaccccctctccagaa aaacacacatggagtcccccagggtcccaggcagagcagcagccccagcaagcgccagcc tggggaagaaatggaccttctccacctcagcctcattcccaacccgagcctcaagtgagt tctaaggctccagcacatacacaggcacaacagcagccacccgtgagtacttggacacct gctgaaatgaagccccaggctccagctccaagtcagtccccaccacagctcccttgggtg actccccagcctcctcctcctcagcctcaagctcagcctcagccaccaattaattattgg gctgcgcagccccaatgggctcaacctcaagagcaagcacaggcccagccaccatgggtt cagcctcaagaacaagtacagcaacagcccctgtcaccttgggctcagcctcaagaacaa gttcagcaacagccccagccaccatggactcagcctcaagaacaagcagaggtccagcca ccatgggttcaacctcaagaacaagtccagcaacagccccagccaccttgggctcagcct caagaacaagtccagcaacagccccagccaccatgggctcagcctcaagaacaagcacag gcccagccaccatgggttcaacctcaagttcagcaacagccccagccaccatgggctcag cctcaagaacaagttcagcaacagccccagccaccttgggttcagcctcaagaacatgta cagcaacagccccagccaccatggggtcaacaacctcagcctccacaacaggcttggccc caggcccaggcccagcctcagccaccttgggtgtcatcacctcagcctccaatgaatgca tggacaccaccacagagccaggcccagccaccacagccaccttgggcccaatcagcccaa ccccaacctacagctcagccccaaccccatatgaatacatgggcccaagcacctgctcag gctcaagcacagctacccattaatgcctggaccccagatcagaatcaggtccagccacag tcacattgggcccaaacaactccaacccaatccccatcccagcaaagctggcaacagcca cctccacagcagacacctccacagcagacacccccacagccacctatgaatgcatgggcc ccggctcaggcacagcctcagacacacacaagtacctgggccccacaaccacagcaagcc ccagtaaatacccagaccccgatggacagagtggctcaaccttctccgaaacctgggaat gcgccacaaaatgctccccgttctattccaccgcctcgcccacagcgaatgaattcttac acgcttggagaaaggtcatcgtcacccctcatcaatccaatggccagcgtcttggtacca gtgcgaggcatgggctcagcattgtcgatgccggctgttacagggaaaggagccgatttg ttcgccaagaggcagtctcgtatggagaagtatgtcgtggattcagacactgtgctggca gccactgcacaggcagcccagcaagcccaggcagccactgcgcaggaaaacaaggcaagg tccacatcgccctctccctccgtacctcattcgtggaaatattcacccaattgcagagct ccccctacatcaaattacaaccccatacagtccccgtcctacccaccaggggctattaag caaccccctccatctagccctgcggccaaagccaagaaagggaaaggcaaacctgcctgc aaaccccttgctgttatagatgtcatgaaacatcagccgtatcagctcaatgcctccctt tttacatatggcccagcagtggaggctgccgaggctgccaaggccgctgcaccaaagcct gccccagcccctgccccagtccctccaaaccaaaaccaaccagtcagatatgagcaactt tcccctgtccagccggctggaccaatgaatgctgcctatccacagcagcctcagcaccct cagcagccctatgggatgccccctcaaccacacatgcacgatagtccctaccaccaagtc ccacctaatgcttaccagacacctaacaacccctaccagcaagctcctgctggcccttac caacaaccatataatcccctttaccaacaagcccctccagccccttatctaccccagcac catccccagccccaagctccaaacccttcctaccaaccgaccccccaaggtccatatcag ccagcccatagccccacttaccaagcagcaccccaagccccctaccagccactacctccc agtacctatgtggtccccagctttccgatagcggcaaagcctgagtccatctctgggggc agcaccgctccaaagcccaggttcatggccaaaaagagttcagcccaggtatggaagcca gcagctgtggacaaagagtga

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