Salmo trutta (river trout): 115194262
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Entry
115194262 CDS
T08542
Name
(RefSeq) multiple PDZ domain protein isoform X1
KO
K06095
multiple PDZ domain protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru04517
IgSF CAM signaling
stru04519
Cadherin signaling
stru04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115194262
04519 Cadherin signaling
115194262
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115194262
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
PDZ_4
MPDZ_u10
L27_1
Motif
Other DBs
NCBI-GeneID:
115194262
NCBI-ProteinID:
XP_029609694
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All DBs
Position
5:complement(46092285..46163244)
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AA seq
2113 aa
AA seq
DB search
MIETMDTQRALQAVERLQAKLKDRGEVPTEEKLSLLKSVLQSPLFHQILALQKSVQLLKD
QGGVTSTLSGDLSECYTSAQANGGHLAYPEASTSTQVNGKQSPEEFEHIIRSMAQGRYVT
HMELLKPLSRGLGFSVVGLRSENRGELGIFVQEIQPGSVAHCDGKLKESDQILAINGQPL
DQTVTHQQAIGILQRASECVQLTIARGPIPQLASPVVSRTPSAASTLSAHSSAAHWNHVE
TMELVNDGTGLGFGIVGGKTTGVIVKTILPGGIADQDGHLRSGDHILKIGDTDLYGMGSE
QVAQVLRQCGNRVKLVITRGPPEETAIVPMVLPTVTEQQGYEEEEDEAFDVGLTKNAQGL
GITIAGYVGDKNSEPSGIFVKSITKDSAVAQDGRIHVGDQIIAVDGNNIQGYTNQQAVEV
LRHTSQTVHLKLIRRGFRPEDIPPAVVPSVIVVSPTPGGRDTTLERTDVVDATTQDKKQY
QALSGESDVTNVKDQLTENTRDEAKLTEDEELELKKKWQETLGPSNEVVVAQVEKFSESS
GLGISLDANSGHHYIRSVLPEGPVGRCGKLFSGDELLEVNGISLIGDTHKEVVSILKELP
VCVYIACCRPAPLLKSDRDSGQPGLDEFATESKMKIQGDLGSFLVFEGSEGVATGENVTD
ETLGAPLAMWETEIQDIELEKGESGLGFSILDYQDPMDPAKTVIVIRSLVSEGVAEQDGR
LLPGDRLMFVNSTNLDNASLEDAVQALKGANIGKVHIGVAKPLPPYNEEGSLSSFSGICS
FIFNTLLLKEREEEPAEGRRFWAEPALIDSNEVDLTDERVLAHRFSGEEDDTFQASMIAL
HGSTCSADLSYQMILQSSTPKRSARLDLLTEHPFVTLSCLADDTEPFSPEEKAIAFPLPR
SIGSHTLMIDNNTLANSDQYLAHQLTQLEPSDLSNSYSPYTDPEPGLNDLGEPMQSLHFP
VEPTMAVADIGEMEGLMKGDEPTVKQSKEEGDTIRTTGSNFERTITVVKGNSSLGMTVSA
VKDGLGMHIRSIIHGGSISRDGRLGVGDLILAINGEPTANLTNTQARAMLRRHSLIGPDM
GSACAPEDDLCPFYVITYVPVEYLEEYKASLEQPKDDIFSDVPQAPKREIPELPEREDGE
GEESELQSATFSNWNQPRKVELKKEAGKSLGISIVGGRGMGSRLSNGEVMRGIFIKHILE
DSPAARNGTLKTGDRVVEVDGVDLRDASHEQAVEAIRRAGNPVVFLVQSIVHRPRKAPLP
FLLRLNTHPGSNPRPTNQTSASLLSPASPLQSSTTDTNEERAAAMARRNSDKEVESHSRL
FLRISPTNPFTPTPFKPLKREAGKTSSITPHLSLPVVPHVGETDTDTLTEIPDRQAQAED
EDEFGYSWKSIIQRYGSLPGLLHMIELEKGKTGLGLSLAGNRDRSRLSVFVVGIDPCGAA
SKDGRIVVGDELLEINGQILYGRSHQNASSIIKSAPSKIKIIFIRNTDALNQMAVGPVRE
HGDTLEPQTELETCTSIAPSAIDVDMFKYVRHVILPKEEGGFGITFGEEDPKNGVVIQSI
TEKGPAGKDGSIKSGDKLLAVEDEPVVGYTVERVHSLLGNAKGSVKLTICTNESLPLPPY
YTDQATIIPSIYMANLGQPESEPIRSSSRSSTPGTLASSDPVTCPIIPGCETTIDISKGH
TGLGLSIVGGCDTLLGTIIIHEVYEEGAASKDGRLWAGDQILEVNGIDLRVATHDEAINV
LRQTPQRVRLSVFRDEAQYKEEDLWDAFTVELNKKPGQGLGLSIVGRRNDTGVFVSDIVK
GGVVEIDGRLMQGDQILSVNKEDVRNATQESVAALLKCGVGPIVMEVGRFKAGPFHSERR
FSQSSQMSETGSCKVTPHSLSASSGSLQMDCDSVQHTTLDQEEIRSVEFTKGVTDSLGIS
IAGGVGSPLGDVPIFIAMMNPTGLAAQTHKLMIGDMIVSICGTATEGMSHSQAVTLLKNA
TGTIELQVVAGGDTTVTGPSQEQTAAGLSVSSLTPTSIFHDDLGPPQYKTITLARGPDGL
GFSIVGGFGSPHGDLPIYVKTVFGKGAASEDGRLKRGDQIMAVNGQSLEGVTHEEAVGIL
KRTKGTIALTVLS
NT seq
6342 nt
NT seq
+upstream
nt +downstream
nt
atgattgagacaatggatacccagcgtgccttgcaggcagtggagcgtctccaggccaag
ctgaaggaccggggggaggtccccaccgaggagaagctcagcctgctcaagtcagttctc
cagagccccctgttccaccagattctggccctgcagaagtctgtccagctcctcaaagac
cagggtggtgtcacatcaacacttagcggtgacctgagtgaatgctacacatcagcccag
gccaatggtggccatcttgcctacccagaagcctccactagtacacaggtcaatgggaag
caatcgcctgaggagtttgagcacatcattcgctccatggctcaggggcgctacgtgacg
cacatggagctgttgaagccgctgtctcgaggtctgggcttcagcgtggttggcctgagg
agcgagaaccgtggggagctgggcattttcgtccaggagatccagcccgggagcgtggcc
cactgcgatgggaagctgaaggagtcagaccagatcttggccatcaacggtcaacccctg
gaccagacagtgacccaccagcaggccataggcatcctgcagagagcgtctgagtgcgtg
cagctcaccatagccagaggacccatccctcagctggccagccccgtggtgtcccgtacc
ccctccgctgccagcaccctttctgcccactccagcgcggcccactggaatcatgtggag
accatggagctggtcaacgacgggacaggcctgggctttggcattgtgggaggaaagacc
actggtgtcattgtcaaaaccatcctgcctggaggcatcgctgatcaggatgggcatctg
cgcagtggggaccacatcctcaagattggggacactgacctatatggcatgggaagtgag
caggtggctcaggtcctgaggcagtgtggtaacagagtgaagttggtcatcaccagaggc
cctccagaggagaccgccatcgtcccaatggtgttgcccacggtcacagagcaacaggga
tacgaggaagaggaggacgaagcgttcgacgttgggctgaccaagaacgcccagggtctg
ggaatcaccatcgccggctatgtgggggacaaaaattctgagccctctggtattttcgtg
aaaagtataactaaagacagtgcggtagcgcaagacggtcggatccatgttggggaccag
atcatagccgtggacggtaataacatccagggctacaccaaccagcaggccgtggaggtg
ctgagacacacgagccagaccgttcacctgaagctgatcaggcgaggcttccgtccagag
gatatcccacccgctgtggtgcccagtgtgatcgtagtctcaccaaccccagggggcaga
gacacgacactggagaggacggatgttgtggacgccaccactcaagataagaaacagtac
caggcattgagtggggaatctgatgtcaccaacgtgaaggatcagttaactgagaacacc
agagacgaagcaaagctaacagaggatgaagagttggagctgaagaagaagtggcaggag
actcttggccccagcaacgaagtagtggttgcccaggtggagaagttcagtgagagcagt
ggtctgggaatcagtctggatgccaacagtgggcaccactacatccgctccgtcctgccg
gaggggccagtgggacgctgtgggaaactcttcagtggggacgaactgctcgaagtcaat
ggaatatccctgattggtgacacccacaaggaagtggtgagcattctgaaggagctgcct
gtctgtgtctacatagcctgctgtaggcccgcccctctcctgaagagtgacagggattct
ggccaaccagggttggatgaatttgctactgaatctaaaatgaagatacagggagacctc
ggcagtttcctggttttcgaaggttctgagggggtggcgacgggggaaaatgtaacggat
gagacactcggagctcctttggccatgtgggagacggagatacaggacattgagctggag
aagggtgagagcggactgggattcagcatcttggactaccaggacccaatggatcctgcc
aagactgtgattgtgattcgctctctggtgtctgaaggagtggcagaacaggatggcagg
ctattgccaggtgaccggctcatgttcgtcaacagcaccaacctggacaacgccagtctg
gaggacgccgtccaggcattgaagggggctaacatcggcaaggtccacattggggtggcc
aagccactacctccatacaatgaagagggcagtctgtcgtcattctcgggaatctgttct
tttatattcaacactctgctgcttaaagagagagaggaggagccagcagagggccgccgt
ttctgggcagagcctgcattgattgactccaatgaggtagacctgaccgacgagagggtg
ttggcgcatcgcttctctggcgaggaggatgacaccttccaggcgtccatgattgccctc
cacggcagcacctgcagcgctgacctgtcctaccagatgatcttgcagtcctccacaccc
aagcggagtgctcgtctggacttgttgaccgaacatcccttcgtgacgttgtcctgcctc
gcagatgacactgaacccttttccccggaggagaaggccatcgctttccccctgcccagg
agtattggaagtcacaccctaatgattgacaacaacacactagctaactccgatcagtac
ctggcgcatcaattaacccaattggagccgtcggatctgtcgaactcgtacagtccgtac
actgaccctgagcccggtttgaatgatttgggggagccaatgcagtctctccattttccg
gtggagcccaccatggccgttgcggacataggggagatggaaggcttaatgaagggggat
gagccaactgtaaagcagtccaaagaggaaggggacacgattagaaccactgggagtaat
tttgaaaggacaatcactgttgtcaagggcaactccagtctcgggatgacggtgagcgcc
gtcaaggatggcttggggatgcacatccgcagcatcatccacggaggctccatcagccga
gacggccgtctgggggtgggggacctcatcctggccatcaacggcgagcccacggccaac
ctgaccaatacacaggcccgtgccatgctccggagacactccctcattgggccagacatg
ggatctgcttgtgcaccagaggacgatctatgccccttttatgtcatcacctatgttcct
gtggagtatctggaggagtacaaggccagcctggagcagcctaaagatgacatcttctct
gatgttcctcaggccccaaaaagagaaatcccagaactcccagagcgggaggatggagag
ggagaggagagtgagctacagagtgccaccttcagtaactggaaccagcccaggaaggtg
gagctcaaaaaagaagctggcaagtcccttggcatcagcatcgtggggggcagaggaatg
ggcagtcgcctcagcaacggcgaggtgatgcggggcatcttcatcaaacacatcctggag
gacagccccgccgcccgcaacggaaccctgaagactggagacagggttgttgaggtggat
ggcgtggacctgagagatgccagtcacgagcaggctgtggaggccatccgcagggcagga
aatcctgtagtgttcctcgtccagagtattgtccacaggcccaggaaggcgcccctaccc
tttcttctgcggctaaacacccaccccggatccaacccacgacccactaatcaaacctct
gccagcttattatctcctgcctctccgcttcagtcctcaaccacggacaccaacgaggag
agagcggcggccatggcacggcgcaatagtgacaaggaggttgagagtcacagtagacta
ttcctacgcatctccccaactaaccctttcactcctactccgtttaagccactaaagagg
gaagcgggaaagacatcgtccatcactcctcacctctcccttcccgtggttccccacgtc
ggggagacagacaccgataccctgacagagattcccgacagacaggcccaggcggaagac
gaggatgagtttggctacagctggaagagcatcattcagcgctacggcagccttccgggg
ctgctgcacatgattgagctggagaaggggaagaccggcctgggccttagtctggctggc
aaccgcgaccgctctcgcctgagcgtgtttgtggtcgggatcgacccctgtggcgccgcc
agcaaagatggtcgcattgtggttggggatgaactgttggagatcaacgggcagattttg
tatgggaggagtcaccagaatgcctcctccatcatcaaaagcgctccgtcgaagatcaag
atcattttcatcaggaacacagatgctctgaaccagatggctgtaggaccagtgagggaa
catggagacaccctggagccccagacagagctagaaacatgtacttccattgcaccctcg
gcgatcgatgtcgacatgttcaagtatgtgcggcacgtcattctaccgaaggaggagggt
ggattcggcatcactttcggtgaggaagaccccaagaacggggtggtgattcagagtata
actgaaaaaggaccagcaggaaaggacggcagcatcaaatctggagataaactcctggct
gtggaggatgaaccagtggtgggctacactgtggagagggtccactctctactggggaac
gccaaaggctcagtgaagttgacaatctgcacgaatgagtcattgcccctccctccctac
tacactgatcaggccaccatcatccctagcatctacatggctaacctgggccagcctgag
tcagagccaatcaggagctcaagtcgctcgtccacccctggcactctggcctcctctgac
cctgtgacctgtcccatcatccccggctgtgagaccaccatagacatctccaaaggccac
acgggcctgggcctcagcatcgtggggggctgtgacactctattggggaccatcatcatt
cacgaggtctatgaggagggagctgcctccaaggatgggagactttgggctggggaccag
atcctggaggtgaatggcattgacctgcgcgtggccactcacgacgaagctatcaacgtg
ctacggcagacccctcagcgggtgcgtctgagcgtgttcagggatgaggcccagtacaag
gaggaggacctctgggatgcctttaccgtggagctgaacaagaagcccggccagggcctg
ggcctcagcattgtggggaggaggaacgacacaggggtgtttgtgtcggacatagtgaaa
gggggcgtggtggagattgacgggaggctgatgcagggagaccagatcctctccgtcaac
aaggaggatgtcagaaacgccacccaggagtcagtggctgcactgctgaagtgtggtgtg
ggacccatagtgatggaggtgggcagatttaaagccggacccttccactctgagagaagg
ttttcacagagcagtcagatgagcgaaacgggcagctgcaaggtgacccctcactcgctt
tcagcctcctctggtagcctccagatggactgtgacagcgtacaacatacaacactggac
caagaggagatcagaagtgttgaattcacaaagggtgtcactgattcattgggcatcagt
attgcgggtggagtgggcagtcccctgggcgatgtgcctatcttcatcgccatgatgaac
cctaccggtctcgctgcccagacacacaaactcatgatcggtgacatgatcgtcagtatc
tgtgggaccgctactgagggtatgagccacagccaggccgtcaccctgctgaagaatgcc
accggcaccatcgagctgcaggtggtagcagggggtgataccacagtgaccggcccgtct
caggagcaaactgctgccggactctcagtctccagccttactcctactagcatcttccac
gacgacctgggacctcctcaatataagaccattaccctggccaggggcccagatggcctg
ggcttcagcattgttggtggctttggaagcccacatggagacctgcccatttatgtgaaa
accgtgtttggaaagggggcagcgtcagaggacgggcgtctgaagcggggggatcagatt
atggctgttaacggacagagtctggagggggtcacccacgaggaggccgtgggcatcctg
aagaggaccaagggtacaattgccctcactgtgctctcctag
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integrated database retrieval system
