Salmo trutta (river trout): 115194265
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Entry
115194265 CDS
T08542
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru02010
ABC transporters
stru04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115194265
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115194265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stru02000
]
115194265
Transporters [BR:
stru02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
115194265
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_15
DrrA1-3_C
AAA_23
MukB
PatG_C
Motif
Other DBs
NCBI-GeneID:
115194265
NCBI-ProteinID:
XP_029609717
Ensembl:
ENSSTUG00000040419
UniProt:
A0A674D7L8
LinkDB
All DBs
Position
5:46555330..46776084
Genome browser
AA seq
2254 aa
AA seq
DB search
MGLLTQLGLLLWKNFTLRKRQKVRLVVELLWPLFLFFILVWVRSTTQPIYQGECHYPNKA
MPSAGVLPWLQGMMCNIDNPCVNHSTPGEAPGQVNNFNNSIIAGMLIELQSLLANRSIIT
KIQTLSDDVDQWVLILQTSNHEKGQPIPLRSILNDNEMFTTYLRENLSMPSMVADSLITS
NIRLNEMMGISRQDDLRITLCNGTALDRYVEFSSASDKEAFQKVSCSLTAQQLRQTGEVF
LQNLDTRKMLTNLPSALDLTPSETFGLVRKTTEDALPVLDEMNKLQNSMLLKAADMLDFR
ADTFGSLNILLCGNAPNSNSTKTTMNFPAFGAMRNDTENNVRSSNSSAFCKVLIDTLEAT
PGLRIVWRTFRPLIQGKILYTPDTPATRLMVKEANSTFNALAMLKELLEAWEDFEPRGRN
YFQNGPQVSALRAFLDNPVFATALSHGLKGTRWTEELLANFLYNRPPEDRPAGMPPNDWR
DVFNATSQILDLLKKFIGCLDLDKFEAVDSEGHLVARALELLENDTYWAGIVFEELDPAA
SHPPPYVKYKIRLDIDEGESTNKIKERGWSPGARDSVNNLRYIWGGFAYLQDMMDHGIIR
LHTNKSQPLGVFAQQMPYPCYVDDVFLASIGTMLPMYLVLAFMYTVCMTIKGLVLEKELR
LKEVQRAVGVQNGAIWFAWFTENFVLLMVPCAFISVMVKYGKVLQYSDPSVIFVFLLVFC
VATIMECFFISVFFSKANLAAACGGLIYFVLYLPHLLCYAWRDVMGFQVKIAVSLLSCVA
FGYGCENFAKYEEQGIGIQWSNIAQNPEDGDRYSFIVSILMMLVDALIYWLLTWYIENVF
PGQYGVAKPWYFPFTASYWCGTSSAPNADPSQFKDPIEYTDYLEKPPLNMKAGVSIRNLV
KIYKTGKKLAVDGLTVDFFENHITSFLGHNGAGKTTTMSILTGLFAPTSGTALINGYDIR
TDMDTIRKHLGMCPQHNVLFNDLTVEEHIYFYSRLKGRSREEVKTEIDQMIKDVGLPHKR
KEFAKNLSGGMQRKLSVAIAFVGGSNIVILDEPTAGVDPYARRGIWELLLKYKQGRTIIL
STHHMDEADILGDRIAIISHGKMCCYGSSLFLKKYFGSGYYLTLVKAGDEQMTNQCTGVE
QRQVKEETGESLRRTSLIEGIARQNWSNSEPTDVSKVVCRHVPEAVFLESIGQEITYILP
YGGAKDGTFALLFKELDLKMADIGVTNYGISDTTLEEIFLKVAEDTGVDAEIPAINAALV
RDKTRSSRESKRQRQSLTKVGNTSDEMPGKSAEDEMKVKFTSRVEDVERVANVNGKGSSV
ITGWELIRRQFLALFIKRFHHARRSRKGLIAQVILPAAFVCLSLIFSVIVPPFAEYPNLE
LQPWMYGLPQTTFYSNDGPPNNTEVARVADSLVNNPGFGTRCMANNPIPNLPCVPNDSKW
FTPTVDPSISNIFINGNWSMANPSPNCQCSTPQKTTMLPDCPPGAGGLPPPQRTQNTTDT
LQDLTGRNMTDFLLKTYKEAGRKRYGGISVGGVNSQVRMTEPEIETVIRDLRSLLNSSQD
NMTDQMLLNTETLLKELGTRDNVKVWFYNQAWHSIVSFLNVANNAILRGNLPPGHDPREY
GISASSHPLNLTKAQLSYQAMAATSTDVVVSICVIFAMSFIPASFVLFLIQERVSKAKHL
QFVSGVNPTVYWVANFAWDICNYIVPCLIVIVIFLCFQQKAYVSLSNLPALILLLMMYGW
SITPMMYPASFIFNVPSTAYVVLTCINLFIGINGSVATFIMELFADDNISKINGIVKQVL
LIFPHFCLGRGLIDMGKNQAMATLYESFGEDRYQDPLSWDMVGKNLCAMAIQGAVMFTIT
LLIQYKFCYKPRLISGESFSEEDEDVDVARERARIHKGGSEKDLLRICDLSKVYSGKKIP
AVDRVCVGVPAAECFGLLGINGAGKTTTFKMLTGDISISGGEAFLNGYSIRTEMRDVHQN
MGYCPQFDALNDLLTGREHLEFYARLRGVPEKEVPMVAEWGIQKLGLVKYSNKSAGTYSG
GNKRKLSTAMALIGCPPVVFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEEC
EALCTRMAIMVNGQFKCLGSIQHLKSRFGDGYTVIVRVGGSPPALGPVEEFVHETFPGSV
LKEKHHNTLQYQLPHSEGALANIFSQFTTHQQRLGVEDYSVSQTTLDQVFVNFARYQQEE
DNQALQVYDNKVDVSDEMPMETRISTDSTVPESV
NT seq
6765 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacacaactcggtctgctcctgtggaagaacttcactcttcggaagaga
caaaaggtgcgtctggtggtggagttgttgtggcctctctttctgttcttcatcctggtc
tgggtgagatcaaccacccaacccatttaccagggcgaatgtcattatccaaataaagcc
atgccttccgccggggtgctgccttggcttcaaggcatgatgtgtaacatagacaaccca
tgtgtaaaccattccacgccaggagaagcaccaggacaagtcaacaacttcaacaattcc
ataattgctgggatgttgatcgagttacagtcacttctggcaaacagatccatcataacc
aagatccagacgctttctgatgatgtggaccagtgggttttgattctacagacatctaac
catgaaaaaggtcagcccattcctctgagaagtatcctgaatgacaatgaaatgttcacc
acatatctgagggaaaacctgtccatgccatcgatggtagccgacagtctgattacctca
aatattcgcctgaatgagatgatgggcatttcaaggcaagacgatctgaggatcaccctt
tgcaatggaacagctcttgatagatatgtggaattcagcagcgcctctgacaaggaggcc
tttcagaaagtcagctgctccctcacagcacagcagttgagacaaaccggagaagttttc
ctacaaaacctggatacaaggaagatgctcaccaatctaccttcagctttggatttgact
ccgtccgagacctttggattagtgagaaaaactacagaggatgccttacccgtgcttgat
gagatgaacaagttgcagaactcaatgttgttaaaggccgctgatatgctggatttcaga
gcagacacatttggcagtctgaacatcctactttgtggtaatgcaccaaactccaactcc
acaaagaccaccatgaatttccctgcttttggagcgatgaggaatgacacagaaaacaac
gtcaggagcagcaattccagtgccttctgcaaagtactgattgacactcttgaggcaact
cctggcctacgtattgtttggaggacatttcggcccctgatccaagggaagatcctctac
acccctgacacacctgcaactagactaatggtgaaagaggcaaatagtactttcaacgca
ttggccatgttgaaagagttgttggaagcttgggaggattttgaaccacgtggtcggaac
tactttcaaaatggcccccaagtcagtgcactgcgggcctttctagataacccggtgttt
gcaaccgcactcagccacgggctcaaaggcacaagatggacggaagaactgctcgccaac
ttcctgtacaacaggccccccgaggaccgccccgcgggtatgccgccgaatgactggcgc
gacgtgttcaacgccaccagccaaatcctggacctcctgaagaagttcattgggtgcctg
gacctggataagtttgaggctgttgacagtgagggacatctcgtggctagagccttggag
cttctagaaaacgatacgtactgggctggtatagttttcgaagaactcgaccctgccgcc
agccacccccctccttacgtcaagtacaagatccgcttggacattgatgagggggagagt
accaataagattaaagaaaggggatggtctcccggggcccgtgactccgtcaacaacctg
cgctatatatggggaggcttcgcctatctgcaggacatgatggaccacggcattatacgg
ttgcacacgaacaaatcacagccgctcggcgtgtttgcccagcaaatgccgtatccctgc
tacgtggacgacgtcttcctcgcgagtatcggaaccatgcttcccatgtacctggtgctg
gccttcatgtacaccgtctgcatgaccatcaagggcctcgtcctggagaaggagctcagg
ctcaaggaggttcagcgggccgttggagttcagaacggtgccatttggtttgcgtggttc
accgagaactttgtcctgctcatggtcccatgcgcattcataagtgtcatggttaagtat
gggaaggtgctgcagtacagcgacccctcagtgatcttcgtcttcctgctggtcttctgc
gtggccaccatcatggagtgtttcttcatcagcgtcttcttctccaaggccaacctggcg
gcggcatgcggaggcctcatctacttcgtcctctacctgccgcacctcctctgctacgcc
tggagggacgtcatggggttccaggtcaaaatcgctgtgagtttgctgtcgtgcgtggcc
ttcgggtatggctgtgagaactttgccaagtatgaggagcagggcatcggtattcagtgg
agtaacatcgcccaaaatcctgaagacggagaccggtatagcttcatcgtgtccatcctc
atgatgctagtcgacgccctcatctactggctgctcacgtggtacatcgagaacgtcttc
ccaggccaatatggagtagcaaagccgtggtacttcccattcaccgcctcctattggtgt
gggacttcatcggcgcccaatgctgatcccagtcagttcaaggaccccattgaatacacc
gattatttggaaaagccaccactcaatatgaaggcaggggtctcaatcaggaaccttgta
aagatctataaaactgggaaaaagcttgcagtggatggactaactgtggacttcttcgag
aatcacatcacctctttccttggtcacaatggggcaggaaaaacaaccaccatgtcgatc
ctgacaggactcttcgctccgacgtcggggaccgctctaataaacggttatgatatccgc
acagacatggacaccattagaaagcatctgggaatgtgccctcagcacaatgtcttattc
aacgaccttacagttgaggaacacatctacttctactccagattaaagggacgaagccga
gaggaagtgaaaacagagatcgaccaaatgatcaaggatgtcgggctgccacacaaacgc
aaggaatttgccaagaacctgtcagggggaatgcagaggaaattgtcggtggcaatcgca
ttcgtgggagggtccaacattgtcatcctggatgaacccacagcgggggtggacccatac
gcccggagggggatatgggaactactgttgaagtacaaacaaggtcgcacaatcatcctc
tccactcatcacatggatgaggcagacatcttgggagaccgcattgccattatctctcac
ggcaagatgtgttgctatggctcctccctgttcttgaagaaatactttggcagtggctac
tatctcactctggtcaaggccggagacgagcaaatgaccaaccagtgcactggagtcgag
cagcgccaggtgaaagaggagactggtgagtcattgaggagaaccagtctgattgaaggg
atcgcaagacagaactggagtaactctgaacccacagatgtcagtaaggtggtgtgtcgg
catgttcccgaggcggtgttcctcgagagcatcggccaggagatcacctacatccttccc
tatggcggggccaaggatggcacctttgccctcctcttcaaagagctggacctcaagatg
gccgacattggtgtcaccaactatggcatctcagataccacactagaggagattttcctc
aaagtggcagaggacacaggtgttgatgcggaaataccagctatcaatgcagctttggta
agagacaagacaagaagttcaagggaatccaagaggcaacgacaaagcctcaccaaagtc
gggaacacttcagacgaaatgcctgggaaaagtgctgaagacgagatgaaagtgaagttc
actagcagagtggaggatgtggagagagtggccaatgtgaatgggaagggctccagtgtg
atcacgggatgggaactgatccggagacagttcctggccctcttcatcaaacgctttcac
cacgcacgcaggagccgcaaaggcctcattgctcaggtgattctgcctgctgccttcgtc
tgcctgtctctcatcttctccgtcatcgtccccccttttgctgagtaccccaacctggag
ttgcagccttggatgtacggactgccccaaacgacattctacagcaatgatggaccgcca
aataacacggaggttgctcgggtggcggactctttggtgaataatcctgggtttgggact
cgctgcatggccaacaacccgataccaaatctcccatgtgtcccgaatgattctaagtgg
ttcactcccacagtggatccctctatcagcaacatcttcatcaacggaaactggagcatg
gccaacccttcccctaactgccagtgcagcactcctcaaaagaccaccatgttgccagat
tgcccacctggagccggtgggctgcctccccctcagaggacccagaatacaacggacaca
ctgcaggacctgacggggcggaacatgacagacttcctcttaaagacctacaaggaagca
gggagaaaaaggtatggagggatttctgtcggaggagtcaactcccaagtcaggatgact
gaaccggaaatagaaactgtgatcagggatttgaggagcctattaaattcctcccaggat
aacatgaccgatcagatgctcctgaataccgagacgctcctgaaagagctcgggaccagg
gataacgtcaaggtgtggttctacaaccaggcgtggcacagtattgtatcgttcctcaat
gtggccaacaacgccatcctgagaggcaacctgccgccgggtcatgaccccagggagtat
ggaatctccgcctccagccaccccctcaacctcaccaaggctcagctttcctaccaggca
atggccgccacctccaccgatgtggtggtgtccatctgtgtcatctttgccatgtccttc
atcccagcaagcttcgtcctcttcctcatccaggagcgtgtcagcaaggccaagcacttg
cagtttgtcagtggcgtcaacccgaccgtctactgggtcgccaacttcgcctgggatatt
tgtaactacatagtcccgtgtctaatagtcatcgtcatcttcctgtgcttccaacaaaaa
gcctacgtgtccctttctaacctaccagctttgattctgctactgatgatgtatgggtgg
tctatcacacccatgatgtacccagcctcgtttatcttcaacgtccccagcacggcctac
gtggtgctgacctgcatcaacctcttcatcggcatcaatgggagcgtggccaccttcatc
atggagttgttcgctgatgacaacatctcgaaaatcaatggtattgtgaagcaggtgctg
ctgatttttccgcacttctgtctgggtcgagggctcatcgacatgggcaagaaccaggct
atggccaccttgtacgaaagctttggggaagaccgttaccaggaccccctcagctgggac
atggtggggaagaacctctgtgccatggccatccagggggcagtcatgttcaccatcact
ctccttatccaatataagttctgctacaaacccagactgatttctggagagtcattctcc
gaggaggacgaagatgtggacgtggcacgggaacgtgcacgcatccataaaggtggctct
gagaaagacctgctgagaatctgcgatctttctaaggtgtactcggggaagaagattcct
gctgtggacagggtgtgtgtgggcgttccagccgcagagtgctttggacttctggggatt
aacggggcaggaaaaaccaccaccttcaagatgctgacgggggacatctccatctccgga
ggggaggccttcctaaacggatacagcatacggacagagatgagggacgttcaccagaac
atgggctactgcccgcagtttgacgccctcaacgaccttctcaccggacgagagcacctg
gagttctacgccagactacgaggcgtaccggagaaagaagtccccatggtggcagagtgg
ggcatccagaagctaggcctggtcaaatactcgaacaagtcagccggtacctacagtgga
gggaacaaacgcaagctctccaccgccatggctttgattggctgtcctcctgtggtcttc
ctggatgagccaacgacagggatggaccccaaagccagacgcttcctgtgggactgcatc
ctgagtgtcatcaaagagggacgctcagtcatcctaacatcacacagcatggaggagtgt
gaggccctgtgcacgcgcatggccatcatggtgaatggacagttcaagtgtctgggcagc
atccagcatcttaagagcaggtttggggacggctacactgtgatcgtgagggtgggcggc
tcgccccccgctctgggccccgtggaagagtttgtccacgagaccttccctggtagcgta
ctgaaggagaagcaccacaacacgctgcagtaccagctcccccacagcgagggcgctctg
gccaacatcttcagccagttcaccactcatcagcagaggctgggtgtggaggactactct
gtctcccagaccactctggatcaggtctttgtcaactttgcgaggtaccaacaggaggag
gacaatcaggccctgcaagtgtatgacaacaaagtggacgtgtccgacgaaatgccaatg
gaaactcggatctcaaccgactcaactgtaccagagagcgtctga
DBGET
integrated database retrieval system
