Salmo trutta (river trout): 115194362
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Entry
115194362 CDS
T08542
Name
(RefSeq) GRB10-interacting GYF protein 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115194362
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115194362
Surveillance factors
Other surveillance factors
115194362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
DUF6033
Motif
Other DBs
NCBI-GeneID:
115194362
NCBI-ProteinID:
XP_029609868
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All DBs
Position
5:49385880..49413445
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AA seq
1055 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKENKAPEDM
QDKEFASILQDEPMQPLALEPLTEEEQRNFSMSVNSVAVLRLMGKGGGVAPAGVARGRGT
TRGGGRGRGRGESGGFYQRSIEEGEAGFGRGAREIHRSQSWDDRGERRFEKPVRAREGVR
VGFEEATGVPVPGVQRKDYTRSDSENWRSLREEQEEEEEGADPGGSWRLAGARRLDDGGP
KSAGWREHDSQVEGRRRKFEFDFSGGRRRAGSEGLEDDRDGLPEWCTDEEGEMGTFDASG
AFLPISKGGKEDEFDFQGIEEEEEEGESLSDMKRIMNGGQRVDVKESDGTSPSSSSSSSP
PGPLSAPPALALNPPMPQLSLTVAELEASQMANSHPVPVPVKASKMPSEVLEGSPAGSST
TQQSPSTTSSLPSPPPSSSAANHLSLPPGGDTEDDEGMKHLQQEAEKMVASLQDTSLEEE
SFTQTLQESRNTASALPLSHDAAMKWFYKDPQAEIQGPFTTLEMCEWFQAGYFSMSLLVK
RGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLVRSPPPRPQPLPPRGSAGSMDQDRLKKQ
QEQAAAVLYQQLQQQQQLFQLISRCGEQGILPSVNRSMSVPDTGSMWDMHTSASQQSGGE
ASLWDLTMNSSTQGPTLEQLQKLQQERREAELRAKREEEEQRKRREEKRRQQEEQKRREE
EEIFRRKQCRQQQELIMKLLQQAPQQGSGSGVGSGWGTGGLNKSGAKGLSLLDMQEAERL
LKQQQRAQQQQRERHQGLSMGGSSMGQWGDRGAVTGGLWGGGGGMEGKAGGGMGLWDEAV
KNQTRSSSMQGLKNSRSSPSLSEQYMLSCRKQRTDEEDKLLKLLQGIKTPQDGFTTWCEQ
MLHALNTQANNTSSPLDVSTIVAYLKEVESPYEVHDFIRSYLGDTMEAKEFAKHFLERRA
KQKQNLQQQLSKEVAGLAMNNFPLPDSMRGVSPSTLQSMFQAAQMGKGGLYDTQGAMKKK
KQPVVLHSDPSILGYSYHNAGERLSLNEMEMVEDY
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagacacttaacttcggccccgaatggctccgtgcactatccagtgggggg
agtgtgacgtccccccctccttcccccgccatgccaaagtacaagctggccgagtatcgc
tacggccgagaggagatgttagcactttatatcaaagagaacaaggccccggaggacatg
caggataaggagtttgcttctattctgcaagatgagcccatgcagccgctggcactggag
cctctcactgaggaggagcagaggaacttctcaatgtctgtgaacagtgtggctgtgctg
aggctcatgggtaaaggagggggagttgccccagcaggcgtggcccgaggcagaggcacc
acgcgaggaggaggccgagggcgaggtcgaggcgagagtggaggattctaccaaagaagt
attgaggagggagaggcaggcttcggccgtggagccagagagatccaccgcagccagagc
tgggacgacaggggcgagaggcgttttgagaagcctgtgcgtgccagggagggggtacgt
gttggcttcgaggaggcgactggtgtccctgtgcctggtgtacagaggaaggactacacg
cggtcggacagtgagaactggcgtagcctccgagaggagcaggaggaggaggaggagggg
gccgaccccgggggcagctggagactggccggagcacggagattagatgatggaggtcca
aagtcagcaggctggcgggagcacgacagtcaggttgaggggcgtcgcaggaagtttgag
tttgacttcagcgggggtcgcaggcgggccggcagcgaggggttagaggacgacagagac
ggactgcctgagtggtgcactgatgaagaaggagagatgggcaccttcgacgcttctgga
gccttcctacccatatccaagggaggaaaggaggatgaatttgacttccagggaatagaa
gaggaggaagaagagggggagagtctttctgacatgaagaggatcatgaatggaggacag
agagtcgatgtaaaggaatccgatggtaccagtccctcttcctcctcctcctcctctccc
cctggccccctctctgcccctcccgctctggctctcaacccccccatgccccagctgtcc
ctcaccgtggctgagctggaggcctctcagatggccaacagccaccctgttcctgttcct
gtcaaggccagcaagatgccaagtgaagtcctcgagggctctccagcagggtcctccacc
acccaacagagccccagcaccacctccagtctgccttcaccccctccctcctcctctgct
gctaaccatctctccctgccaccggggggtgacaccgaggacgacgagggcatgaagcac
ctgcaacaggaggcagagaagatggtggcgtccctgcaggacacgtctctggaggaggag
agtttcactcagacgctgcaggagagcagaaacacagcctccgccctgcccctctcccac
gacgctgccatgaagtggttctacaaggacccccaggcagagatccagggtccattcacc
accctggagatgtgcgagtggttccaggcgggctacttctccatgtctctgctggtgaag
aggggctgtgacgagggcttccagccgctgggtgacgtcatcaagatgtggggacgcgtg
cctttcgcccctgggccctccccgccgcccctgctggtgagatctccaccgccacgccct
cagcctctaccgccccgggggtctgctggtagcatggatcaggaccgtctgaagaagcag
caggagcaggcagcagcagtcctctatcaacagctccagcagcagcagcagctattccag
ctcatcagcaggtgcggagagcagggtattttgccttcggtgaacaggtcgatgtcagtg
ccagatacagggtccatgtgggacatgcatacctcagcttcacagcaatcaggcggtgaa
gccagtttatgggacttaacaatgaattcttcaactcagggtccaactctcgaacagctt
cagaagctccagcaggagaggagagaagctgaactcagggcgaagcgcgaggaggaggaa
cagcgcaagaggagggaagagaagaggaggcagcaggaggagcagaagaggagggaggag
gaggagatcttcagacgcaaacagtgtcgccagcagcaggagctgatcatgaagctgctc
cagcaggccccccagcagggctcaggctccggggttgggtctggctggggcactgggggt
ctcaacaagtcaggggccaagggcctcagtctgcttgacatgcaggaggcagagaggctt
cttaaacagcagcagagagcccagcagcagcagagagaacgtcaccaaggcctgtcaatg
gggggttcctccatgggtcagtggggggacagaggtgctgtcacggggggcctttgggga
ggcggaggggggatggagggtaaggctgggggcggcatgggtctgtgggacgaggcggtg
aagaaccagaccagaagtagcagcatgcagggactgaagaacagccgcagcagcccctca
ctcagtgagcagtatatgctgagctgtaggaagcaacgtacggatgaggaggacaaactg
ctgaagctgctgcagggcatcaagacgcctcaggacgggttcaccacctggtgtgaacag
atgctgcacgccctcaacacccaagccaacaacacctcctctccactggacgtgtccacc
atcgtggcgtacctgaaggaggtggagtctccctacgaggtccatgactttatccgctcc
tacctgggagacaccatggaagccaaagagtttgccaagcacttcctggagcgccgtgcc
aaacagaaacagaacctgcagcagcagctatcaaaggaagtagcagggctggccatgaac
aacttccctctgccggactccatgcggggagtgagccccagcaccctgcagtccatgttc
caggccgcccagatggggaagggagggctgtacgacacccagggggccatgaagaagaag
aaacagcctgtggtgctgcactctgaccccagcatcttagggtactcataccacaacgcg
ggcgagcgtctgagcctgaatgagatggagatggtggaggattactga
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