Salmo trutta (river trout): 115194396
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Entry
115194396 CDS
T08542
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
stru03015
mRNA surveillance pathway
stru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115194396
09122 Translation
03013 Nucleocytoplasmic transport
115194396
03015 mRNA surveillance pathway
115194396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115194396
03041 Spliceosome [BR:
stru03041
]
115194396
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115194396
Spliceosome [BR:
stru03041
]
Complex C
Other components
EJC/TREX
115194396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
115194396
NCBI-ProteinID:
XP_029609918
Ensembl:
ENSSTUG00000003636
UniProt:
A0A673WEF8
LinkDB
All DBs
Position
5:complement(50440096..50468371)
Genome browser
AA seq
1464 aa
AA seq
DB search
MADEDVTLDGKSLQSLRVADLKAALEHRHLPKSGAKNALIKRLKGALMLENVKKTSTSHI
GLQPNSQIGEEMSQNSFIKQYLAQQQELLRQRLEREAREAAEADAGETGPEEEEEEEDDD
DDDDTEQDNDSASYHPDKHCPIPSQPPLARAEEGGGPMMGQGMMSQGMGKGMMSRRPHFG
PGSMPQESPDAPGSWMQQRLSLHTGPRHEEPATPSPPRAVASLSVRVLGDPERQGLPPSV
PPRVQAQENEGTAPADDDRPAHYVLHLSRSARAAASAGGNRVQEDSDDDEDDSSEEDEDE
WGPAAGARRGVGGGGRGGRSPPPRPQQLSPSVPVGRERSRRKLQPPQHIPPQQVVHQPPM
QLRQPTPPPSPPPELSFPLPDTPKQSPPDMDEEPEGAGAGVAVRSPPGGLQRQDSDSSSR
SSSPEPLAQRRPGPLSLLARKMASEGAFGKRGEGASDGQTGPGGESSGPGDGGSSVPEAG
PGVGVVLFPGAAITHIGGSSAVHSGTVPVPDVPAPVSMFGSGAQFHPLSLVSGAAVPSIT
LTAEPQGPSGETAQKRTEKEKKQVEEREMKQVEKEKQEESESCLPPWKHGRDVMSVSSQF
GSGGSEVPAVHQGDSPKKSPFDRDEPLSSPPGSTTYLPDLAPKKPRMFSDTSSGSMASPP
KPGQQGSVVVTTPGEPPLKQEVLISGAQQDTDNTIEVTSPKKASAEKPGWKTGGDIAKTE
TESDSQAEKETPKAASETRRRGPEEAVEVEPMGPVLPPSYPGKGEEEKKRKEDVRKKEEE
RCRQRKKASDRRSSPSSGDSSSSDSDSGSSSSRSSGSTSSRDKKKKSVPGKGHERRRLEK
GGEKKQPSREKKQSSLSEPSGPGPMEVEERPDPEDSRVPQPTPEGDPENSEGRMEESTTP
KALATRSISLTTGSKPSPEGAGEAESGTAAGRKRRWGSSTAVTTKKPSISITTDSLKSLI
PDIKPSQDAVMDLHTDDSQLSGDEDTPTTREDQGLDKDLKIRRTVTQVVPGESHENGQGE
REEEEVENKQERERTHKEKRKNSYSEDTMVSQSSTTHDAKKVTPSDSLVRRSISQQKSGV
SVTIDDPVRTDKLPSPPRGKVSNIVHVCNLVRPFTLGQLKELLNRTGSVVEEGFWIDKIK
SHCYVTYSSTEEAVATRAALYGVKWPQSNPKVLSVDYCEQNELDFHRGLLTVDPREEHRP
QPAVGPGGPKVRPGGLPPLMPERDGRADRGAVGGVRDQWAEREREMERRERTRAEREWDR
DKVRDFGGKPGEERERGRRSRSLERERRRKEREGKEKKTDKKDEPPVKLLDDLFNKTKAA
PCIYWLPLTEEQANQRGKEREERQKERERRRKEQQEEEDKKREEERKERMKSREEGGAAV
STGVGSVRGSEGDRDREGERGRDREGERGRDREGERGRDREGERGRDGDKRKDIGAFKPK
GPDAKPLSGFRRSRSRSNLRDRRR
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgaagatgttacgctggatggtaaatcgcttcaatcgctccgtgtggcggat
ttaaaagccgctttggagcaccgacacctccctaaaagcggggcgaaaaatgcgctcatt
aagcgactgaaaggggctctgatgttggaaaatgttaagaagacttccacttcccacatt
gggctccagcccaactcccagattggggaggagatgagccagaacagcttcataaagcag
tacctggctcagcagcaggagctcctccgccagaggctggagagagaggcccgggaggcg
gcagaggccgatgcaggggaaacaggcccggaggaggaggaggaggaggaggacgatgac
gacgacgacgacacagagcaggacaatgacagtgcttcctaccaccctgacaagcattgc
cccataccctcccagcccccactggcccgggccgaggaaggaggtggaccaatgatgggg
caaggaatgatgtctcagggtatgggcaaagggatgatgtctcgcagaccacactttggc
ccaggctccatgccccaggaatcccctgacgcccctggatcctggatgcagcagcgtctc
tcactccacactggcccccgccatgaggagcccgccaccccctcaccgccccgcgctgtg
gcctcgctgtctgtgcgtgtcctgggggaccctgagcgacagggcctgccaccctccgtg
cccccccgcgtccaggcccaggagaatgaaggcaccgccccggcggatgacgaccgaccc
gcccactatgtgctccacctcagccgctccgctcgggcagcagccagcgccgggggtaac
cgcgtccaggaagacagcgatgatgatgaagatgacagcagtgaggaggacgaagatgag
tggggacctgcagcaggggcaaggagaggggtcggaggcggaggaagaggaggacgttcc
cctccccctcggccccagcagctttcccccagcgtcccagtgggccgagagaggtccaga
cgcaagctccagcctccgcaacacatcccccctcagcaggtagtacaccagcccccgatg
cagctccgccagcccaccccgcccccctctccacccccagagctctcctttcccctcccc
gacacccccaagcagagcccgcccgacatggatgaggagccagaaggagcaggggctggg
gtagccgtccgctcccctccaggtggcctccagaggcaggactccgactccagctcccgc
tccagcagcccagagcccctggcccagcggcggcccggacccctctccctgctcgcccgc
aagatggcttccgagggagcgttcgggaagagaggtgagggtgcctcagacggccagaca
ggtcctggtggggagtcgtccggaccaggagatggcggtagcagcgttccagaagcagga
ccgggggttggggtagtcctgttccctggggctgctatcacccacatcggaggcagcagc
gcagtgcactccggaactgtccctgtacctgatgtccctgcaccagtgtctatgtttgga
tcaggagcccagttccatcctctctctctggtgtctggagcagctgtccccagcatcacc
ctcaccgcggagccccagggtccatctggagagacggcacagaagaggactgagaaagaa
aagaagcaggtggaggaaagggagatgaagcaagtggagaaggagaaacaggaagagagt
gagagttgcctgccgccatggaagcacggacgtgatgtgatgtctgtgtcctcgcagttt
gggtctggggggtcagaggtgcctgcggtgcaccagggggacagcccgaagaagtcaccc
ttcgacagggacgaacccctctcctcccctcccggctcaaccacctacctgcctgatctc
gcccccaagaagccccgcatgttctccgacacctcatccggctccatggcatcccctccc
aaacctgggcagcaggggtctgtggtggtgaccaccccaggggaaccccccctcaaacag
gaagtcctcatctcaggagcccagcaggacacagacaacaccatagaggtcacttcaccg
aaaaaggcgtccgcggaaaagcctggatggaaaactggaggagacattgcaaaaacagag
acggagagtgacagccaggcagaaaaggagacaccgaaagccgccagcgagaccaggaga
agaggacctgaagaggctgttgaggttgagcccatggggcctgttctgcccccctcttac
ccaggaaagggagaagaagagaagaagcggaaggaagatgtgaggaagaaggaagaagag
cggtgcaggcagaggaagaaggcgagcgacaggaggtcatccccctccagcggcgactct
tcatcctccgactcggattctggatcctcttcatcacgttcctctggctccacctcctcc
cgggacaaaaaaaagaaatctgtcccaggaaaagggcatgaaaggagaagactggaaaaa
ggaggagagaagaaacaaccttccagggagaagaagcagtcttccctgtcggagccgtcc
ggccctggccctatggaggtggaggagaggccagacccagaggactccagggtcccccag
cccacccccgaaggggacccagagaacagtgagggccgcatggaggagagcaccactcct
aaagctttggccacacgcagcatctctttaaccacaggcagtaagccgtctccagaggga
gcaggagaggcagagtctgggaccgccgctgggaggaagaggaggtggggatccagcacg
gccgtcaccaccaagaaaccgtccatcagcatcaccaccgactctctgaagtctctgatc
ccagacatcaagcccagtcaggacgctgtgatggatctccacacagacgacagccagctg
tctggggacgaggacacccccaccaccagggaggaccagggcctggacaaagacctgaag
atcagacgcaccgtcacacaggtggtcccaggtgaaagccatgagaatggccagggagaa
cgagaggaggaagaggtggagaataaacaggagcgtgagaggacacacaaagagaagaga
aagaacagctactcagaagataccatggtgtctcagtcgtccacaacacacgatgccaag
aaagtcactcccagtgattctctggtgcgtcgctccatcagtcagcagaagtctggtgtg
tctgttaccatcgacgatccggttcgcacagacaaactgccctctccgcccagaggcaaa
gtctccaacatcgtccacgtctgtaacctggtgcgacctttcaccctgggccagctgaag
gagctgctgaacaggacagggtctgtggtggaggagggcttctggatcgacaagatcaaa
tctcactgctacgtcacttactccagcacagaggaggctgtggccacacgagctgctctt
tacggtgtgaagtggccccagagcaaccctaaggtcctcagtgtggactactgtgagcag
aacgagctggacttccacagaggtctgctgaccgtggaccccagagaggagcaccggccc
cagcctgccgtgggtcctggaggtcccaaagtccgaccgggagggctgccccctctgatg
cctgaacgggacgggcgcgcggaccgcggggctgtcggaggggtgcgggaccagtgggcg
gagagagagagggagatggaacgccgggagaggaccagggcggaacgcgagtgggaccgg
gacaaggtgcgagacttcggaggcaaaccaggagaggagagggagagagggaggagatct
cgctccctggaaagagagaggaggcgaaaggagagggaagggaaggagaagaagaccgac
aaaaaggatgagcctcctgtcaaactactagacgacctcttcaataagaccaaagcagct
ccctgtatatactggcttcccctcactgaggaacaggcaaaccagagggggaaggaacgg
gaagagcgacagaaagaacgcgagaggaggcggaaagaacagcaggaggaggaggacaag
aagcgagaggaggagaggaaggagagaatgaaaagtagagaggagggaggagctgcggtt
agcactggagttgggagtgtccggggatctgagggagacagggacagagagggggagcga
gggagggacagagagggggagcgagggagggacagagagggggagcgagggagggacaga
gagggggagcgagggagggacggagacaagaggaaggacattggtgctttcaaacccaaa
ggtcccgatgctaaacccttgtcggggttccgacgctcccgtagccgtagcaacctccga
gacagacgccgctga
DBGET
integrated database retrieval system
