Salmo trutta (river trout): 115194399
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Entry
115194399 CDS
T08542
Name
(RefSeq) LIM domain-containing protein ajuba isoform X1
KO
K16682
LIM domain-containing protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
115194399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115194399
03036 Chromosome and associated proteins [BR:
stru03036
]
115194399
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
115194399
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
115194399
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
115194399
NCBI-ProteinID:
XP_029609923
LinkDB
All DBs
Position
5:50429345..50439896
Genome browser
AA seq
718 aa
AA seq
DB search
MDRLGTKLLEKLKLTDSGSVKFASSKKKNELVNNSNSNGNNSSGLPPSLNTATSSPSRPG
QFSLTSPTSTEACGLASSGKGLGERVSSTQHLSTSITPQPTDCEHQPYSPSTLAPLRRRS
TQQRASCYLGEGVDIQMRRESGLGDCDPAGSKASLNQRRYSLELQQLVRRQQLLSQPPLS
HSSGPPPAYPIPSSGYGSAPRGGAMAEPHYLPEPERHKRLSLQEAMFYKRLSTGGELWES
TRPASLSHSPHRPSEMGGGGGFFFPPGPALSPCSSFSLQESVLVSPRSSFASSTASGGGG
GSPMGSRCSSNRTSGISLGYDTRYSASSTMAPQLQFSSLHTGGSTGGQGYTVSSRAGAPS
GAGGWQDYLDGVFSPGGAGVQDSRHSYPPALGSPAAACCRAGPEWWDEKGAGAARGEETG
MGAAGERTRYSDLPGTRYQEELARLLLRDAALEGEGLHMGGLMLKEQANPPINALAKLAT
LINTATASRPIKAQEEPETGREASSENRQEFFGTCVKCRKGVYGSDNACQALDSLYHTRC
FTCVSCGRTLRNKDFYNVNGSVYCKEDYMFSGFQAAAEKCSVCGHLILEQQILQAMGNSY
HPGCFRCVVCSKALDGVSFTVDHLSNIYCVSDYNRTFAPKCAACFQPILPAEGSEEILRV
VSMNKDYHFECYHCEDCGKQLSDQPGSQCFPLDSHLLCHSCHMMQVCASHNIPPHSTN
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggaccgacttggaactaagttattggagaagttgaaactgactgactcaggaagtgtg
aaatttgccagttctaaaaagaaaaacgagttggttaacaacagcaacagcaatgggaac
aacagtagtggactaccaccaagcctgaacactgccacttcctcaccttcaagacctggt
cagttttctcttacctctccaacctcaacggaggcgtgtgggctggctagtagcgggaag
ggattgggagaaagagtctcctctacccagcacctctcaacctccatcaccccccaacct
actgactgcgaacatcaaccctactccccctcgactctcgcccccctccggcgccggtcg
acccagcagcgtgcctcctgctacctgggggagggcgttgacatccagatgaggcgtgag
tcgggcctgggggactgtgacccagctgggtctaaggcttctctgaaccagcgccgctac
tccctggagctccaacagctggtccgacgccaacagctcctctcccagcctcctctgtcc
cactcctctggcccccctccggcgtaccccatcccctcctcgggttatggctctgctccc
cgcggcggggccatggctgagccacactaccttcccgagcctgagcgtcacaaacgcctc
tccctgcaggaggcgatgttctacaagaggctgagcacgggaggggagctctgggagagc
accagaccggcctcgctctctcactccccgcaccggccctctgagatgggtggaggagga
gggttcttcttccccccaggcccagcactgagcccctgctcctccttcagcctccaggag
tcggtgctggtcagtcccaggtccagctttgcctccagtacagccagcggtggaggggga
gggagccctatgggcagccgctgtagcagcaaccgcaccagtggaatcagcctgggctat
gacacgcgctactcagcctcctccaccatggcaccacagctgcagttctcctccctgcac
acagggggctccaccggcggacagggatacacggtctcaagcagggccggggcgccctct
ggggctggaggctggcaggactacctggacggggtcttctcacctggaggagcaggggtt
caggatagccggcactcatacccacctgcgttggggagcccggcggctgcctgttgccgg
gctgggcccgagtggtgggatgagaagggagcaggggcagcccgaggagaggagactggc
atgggtgctgccggggagcggacgcgctactcggacctcccgggtacccgctaccaggag
gagctggcacgcctgttgctaagagatgcagcgctggagggcgaggggctacacatgggc
gggctgatgctcaaagaacaggccaatcctccaatcaatgccctcgccaagctggcaaca
ctcatcaatacggctacggcttccagaccaatcaaagcccaggaggagccggaaacaggg
agggaggcgtcgtccgagaatcggcaggagttctttggtacatgtgtgaagtgtaggaaa
ggtgtgtacggctcggataacgcttgccaggctctggacagcctctatcacacacgctgc
tttacctgtgtgtcctgtggtcgcaccctgagaaacaaggacttctacaatgtcaatggc
tctgtgtattgtaaagaggattacatgttctcaggcttccaggctgcagcagagaaatgc
agtgtgtgtggccaccttatcctggaacagcagatcctccaggcgatggggaactcctac
caccctggctgtttccgctgtgtggtgtgttccaaagccctggacggagtctccttcact
gtcgaccacctcagcaacatctactgtgtctctgactacaatagaacgttcgctcctaaa
tgtgctgcctgtttccaacccatcttacctgctgagggcagcgaggagatactcagggtg
gtgtctatgaacaaagattatcactttgagtgctaccactgtgaggattgtgggaagcag
ctctcggatcagccgggttcccagtgcttccctctggactctcatctcctctgtcactca
tgtcacatgatgcaggtgtgcgcctcgcataacattccccctcacagcacaaactga
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