Salmo trutta (river trout): 115194534
Help
Entry
115194534 CDS
T08542
Name
(RefSeq) pulmonary surfactant-associated protein D-like
KO
K03991
mannose-binding lectin
Organism
stru
Salmo trutta (river trout)
Pathway
stru04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115194534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115194534
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
stru04091
]
115194534
Membrane trafficking [BR:
stru04131
]
Endocytosis
Phagocytosis
Opsonins
115194534
Lectins [BR:
stru04091
]
C-Type lectins
Group 3: Collectins
115194534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Collagen
Motif
Other DBs
NCBI-GeneID:
115194534
NCBI-ProteinID:
XP_029610147
Ensembl:
ENSSTUG00000023600
LinkDB
All DBs
Position
5:complement(54346452..54351530)
Genome browser
AA seq
250 aa
AA seq
DB search
MAMPRLFLSILLTSQLTVYLPSEAQIPPLPTSSPSCPAYPGVPGTPGHNGLPGRDGRDGH
DGVTGPKGEKGLPGGIGAQGPPGDVGPAGPKGEIGEPGDAGGNSVISHLLAEIQQLKARQ
ANLEKAASFKVFQKAGDKYLVSNGVLGSFDEGLKFCNNFGATLVMPRNDVENQALSKFIV
GASYGFLGATDRKTEGVWVDLNDEPLTYLDWLSGEPNSGGNGIEDCIATTTSGPWVDITC
DANIVIICEI
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgccccggttgtttctcagcattctgctgacctcacagttgactgtctacctg
ccaagtgaagcccagatccctccccttcccacttccagcccgagctgcccagcttatccc
ggtgttcctggcacacctggtcataacggtctgcctgggagagatgggagggacgggcat
gacggagtcacaggacccaagggagagaaaggactccctggaggaataggggcacaggga
ccccctggtgatgtggggccagctggacctaaaggggagataggggagccaggagatgct
ggaggaaacagtgtgatcagccatttactcgctgagatccaacagctcaaagccagacag
gctaatcttgagaaagctgcaagcttcaaggtcttccagaaggcaggggacaaatatctg
gtgtccaatggagtgctggggagtttcgatgaaggtttgaagttctgcaacaactttggt
gcgacgctggtcatgccaaggaatgatgtggagaaccaagctctttccaaattcattgtt
ggtgcttcttatggtttcctgggagcaacagacaggaaaacagagggtgtttgggtagat
ttgaatgatgagccactgacgtatctggactggctgagtggagaaccaaacagtggaggt
aatggtatagaagactgtattgcaacaacaacctctggaccttgggttgatattacctgt
gacgcaaacattgttataatatgtgaaatttaa
DBGET
integrated database retrieval system
