Salmo trutta (river trout): 115194589
Help
Entry
115194589 CDS
T08542
Name
(RefSeq) dynactin subunit 1-like isoform X1
KO
K04648
dynactin 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04814
Motor proteins
stru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
115194589
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115194589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115194589
03036 Chromosome and associated proteins [BR:
stru03036
]
115194589
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115194589
Membrane trafficking [BR:
stru04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
115194589
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
115194589
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
115194589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
115194589
NCBI-ProteinID:
XP_029610270
Ensembl:
ENSSTUG00000003614
LinkDB
All DBs
Position
5:complement(55932324..55964550)
Genome browser
AA seq
1303 aa
AA seq
DB search
MKDFQAHREVQRSQQNQTEISGSPLLSKMSADGGGKPAKVGSVVEVIGKGQRGTVAYVGA
TLFATGKWVGVILDEPKGKNDGTVQGKRYFQCDENCGIFVRQSQIQLVEDGVTSPDIPES
STAKFLSKQKDMPEIPKSVKQTPISKKSVTRRSTKSTLIQQWNTPGRLSSSSSLPSLLMA
PRAIGLSSSRSREDVSEGSLSSKGALGAPVVPLPSGTPATSGAPPPATPSKAEPPASKQE
EESLRGQVKDLEEKLETLKMKRAEDKVKLKELEKHKIQLEQLQEWKTKMQEQQTDLQKQL
KEAKKDAREALEAKDRYMEEMSDTADAIEMATLDKEMAEERSESLQVEVESLKEKVEELT
MDLEIIKHEVEEKGSDGAASSYHVKQLEEQNSRLKDALVRMRDLSSSEKQEHVKLQKQME
KKNGELETLRTQKEKLQEEMKQAEATIDELKEQVDAALGAEEMVETLTERNLDLEEKVRE
LRETVTDLEAINEMNDELQENSRETEMELREQLDLNGARVREAQKRVEAAQETVADYQQT
INKYRQLTASLQDANKELTSAQNANAEQVQQPPAELFDFKIKFAETKAYAKAIEMELRKM
EVGQANRQVSLLTSFMPDSFLRHGGDHDCILVLLLIPRLICKAELISKQAQEKFDLNGNP
VERTGVKMRGPPGEQLSFASGLVYSLTLLQATLHKYQQALNCCSVQVYTQMGTLYSEMSV
HERSLDFFIDLLHKDQLDETVHVEPLTKAIKYYQQLYSIHLAEQTEDCTVQLADHIKFIQ
SALDCISAEVVRLRAFLQPGQEGLALNILLKDLDTTCSDIKQFCKKIRRRMPGTDVPGVP
AALSFGAPVSETLTDCRRQLTRVVAVLQEVAAAGAQMVAPLGEQEGLNALKLDDVAFKAV
EQVYGSQGLNPHECLRQSCSAVISTMNKMATAMQEGEYDAERPQGKAPPVEARAAALRAE
ITDAEGLGVKLEDRDTVIKELKKSLKIKGEEMSEAHVRLSLLEKKLDTSTKDADERVEKI
QTKLDETLALLKKKEKEFEETMDALQADIDQLEAEKAELKQRLSSQSKSTIEGLRAPPAS
GIASIVTGSAGAALAPGAGGLSGTMQVVDSPLLRQQVEAQRLGIKHLKNENNRLKAEKMR
AQLASLPPLHVPKLHLREATSSSSPPAEGPLQGALYRKTEQLLGTLLKMTATVKVVDITG
KTPVSASAQLLDQTARLQSLSDALDKLKGEVAEHVVSQQPGAKVSSDFATFPISSFVKAK
EEKQGGTVFVGRVAIPCAKGQEQVHRLVLSQQHLQQVHRLLIA
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttccaggcacacagagaagtgcaaagatcacaacaaaatcaaaccgagatc
tccggcagccccctcctgagcaagatgagtgcggatgggggaggcaagcctgccaaggtg
ggctcggtggtggaggtgatcggtaagggccagcgtggcacggtggcgtatgtgggcgcc
acactctttgccacaggcaagtgggtgggtgtgatcctggacgagcccaagggcaagaat
gatggcacggtccaggggaagagatacttccaatgtgacgagaactgcggcatctttgtg
cgccagtcccagatccagctagtggaagatggtgtcacctctccagacatcccagagtcg
tccactgccaagttcctgtccaagcagaaagacatgcctgagattccaaaatcagtcaaa
cagacgcccatttccaagaagtccgtcacccgccgtagcaccaagtctactctcatacaa
cagtggaatactccaggtcgtctctcctcctccagctccctcccctccctcctcatggct
ccccgggccatcgggctgtccagctctcggtccagggaggatgtcagcgagggcagcctg
tcttccaagggtgcgctgggggctcctgtcgtccccctgcccagcggcacccccgccacg
tccggagctccaccccccgccacccctagcaaggctgagcctcctgcatcaaagcaggag
gaggagtctctgcgtggccaggtgaaggacctagaggagaagctggagaccctaaagatg
aagcgggcggaggacaaggtcaagctgaaggagctggagaaacacaagattcagctggag
cagctccaggagtggaagaccaagatgcaggagcagcagactgacctgcagaaacaactc
aaagaggccaagaaggacgcccgggaggcattggaggccaaggaccgctatatggaggag
atgtcagacacggcggacgccatcgagatggccaccctggacaaggagatggccgaggag
cggtcagaaagcctgcaggtggaggtggagtcgctgaaggagaaggtggaggaactcacc
atggacctggagatcattaaacacgaggttgaggaaaaaggttccgacggagctgcctct
agttaccacgtcaagcagctggaggagcagaacagcaggttgaaagatgctctggtcagg
atgcgtgacctgtcgtcgtctgagaagcaggagcacgtgaagctgcagaagcagatggag
aagaagaatggagagctggagactctgaggacccagaaggagaaactacaggaggagatg
aagcaggctgaggccaccatcgatgagttgaaggagcaggtggatgctgctcttggggca
gaggagatggtagagactctaactgagaggaatctggacctagaggagaaagtcagagag
ctgagagagacggtcactgacctggaagcgatcaacgagatgaatgacgagcttcaggag
aacagccgagagacagagatggagctgagggagcagttggacctgaacggggccagggtg
cgagaggcccagaagagagtggaggctgctcaggagactgtagcggactaccagcagacc
atcaacaagtaccgccagctcactgccagcctgcaggatgccaacaaggaactgaccagt
gctcagaatgccaacgcagagcaggtccagcagccaccagctgagctgtttgacttcaag
atcaagttcgctgagaccaaggcctacgccaaggccatagagatggagctgaggaagatg
gaggtgggccaggccaacagacaggtgtctctcctcacatccttcatgcccgactctttc
ctgcgtcacggaggagaccacgactgtatcctggtgctgctgctcataccaagactcatc
tgcaaggctgagttgatcagtaagcaggcccaggagaagtttgatctgaacggtaacccc
gtggagaggactggggtgaagatgagaggaccacctggagaacagctcagcttcgcctca
ggactggtctactctctcaccctgctacaggccacgctgcacaaataccaacaagctctg
aactgctgcagtgtgcaggtgtatacgcagatggggactctctactcagagatgagtgtc
catgagcgttccctagacttcttcattgacctgctgcacaaagaccagctggatgagacc
gtacacgtggagcctctcaccaaggccatcaagtactaccagcaactgtacagcatccac
ctagctgagcagactgaagactgcaccgtgcagctggctgatcacatcaagttcatccag
agtgcgttggactgtatcagtgctgaggtggtgcgtctcagggctttcctgcagccggga
caggaggggctggctctgaacatccttctgaaggacctggacaccacgtgcagtgacatc
aaacagttctgtaagaagatcagacgcaggatgccagggaccgatgtaccaggggtgcca
gctgctctgtcttttggagctccggtgtcggagacgctgacggactgcaggcgtcagctg
acgcgggtggttgccgtgctacaggaggtggctgcggcgggggcgcagatggtcgcccct
ctcggggagcaggagggtctcaacgctctaaaactggatgacgtggccttcaaggctgtt
gaacaggtgtatgggtcccaaggtctaaacccccatgagtgtctgcgtcagtcctgcagc
gctgtcatctccaccatgaacaagatggccactgccatgcaggagggagagtatgatgct
gagagaccacagggaaaggctcccccagtagaggctcgtgcagcagccctcagggcagag
atcactgatgcagagggcctgggagtcaaactggaagacagagacactgtcatcaaggag
ctcaagaagtcacttaagatcaagggagaggaaatgagtgaggcccacgtccgactcagt
ctcctggagaagaagctggacacgtcgactaaagacgcagacgaacgtgtggagaagatc
cagaccaaactggatgagaccttggccctgctcaagaagaaagagaaggagtttgaggag
accatggacgccctgcaggcagacatcgaccagctggaggcagagaaggcggagctgaag
cagcgtctctccagccaatcaaagagcaccattgagggcctcagggccccgcctgcatcg
ggcatcgcctccatcgtcacgggatccgccggagccgctcttgccccaggagcagggggt
ctgtctgggaccatgcaggtggtggactcccctctcctccgtcagcaggtggaggctcag
agactgggtatcaaacacctgaagaacgagaacaacagactcaaggcagagaagatgaga
gcccagttagcctctctccctcccctccacgtccccaagttacacctgagagaggccacc
tcttcctcctctccccctgctgaggggcctctccaaggggctctctacaggaagacggag
cagctcctggggaccctgctcaagatgaccgccacagttaaagtggtcgacatcaccggg
aagacaccagtgagtgctagtgctcagctcttggaccagacagctcggctgcagagcctg
agtgacgccctggacaaactgaagggtgaagtggcagagcatgtggtttctcagcagcct
ggggcaaaggtctcctctgactttgccacctttcccatttcctctttcgtcaaggcgaag
gaggagaagcagggaggcacggtgtttgtaggccgcgtggccatcccgtgtgccaagggc
caggagcaggtgcaccgtcttgtcctatcacaacaacacctgcagcaagtgcaccgcctc
ctcatagcctaa
DBGET
integrated database retrieval system
