Salmo trutta (river trout): 115194641 Help Entry 115194641         CDS       T08542                                  Name (RefSeq) collagen alpha-6(IV) chain   KO K06237   collagen type IV alpha Organism stru  Salmo trutta (river trout) Pathway stru04382   Cornified envelope formation stru04510   Focal adhesion stru04512   ECM-receptor interaction stru04518   Integrin signaling stru04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:stru00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115194641    04518 Integrin signaling     115194641  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     115194641   09142 Cell motility    04820 Cytoskeleton in muscle cells     115194641  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     115194641  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:stru04147]     115194641    00536 Glycosaminoglycan binding proteins [BR:stru00536]     115194641 Exosome [BR:stru04147]  Exosomal proteins   Exosomal proteins of other cancer cells    115194641 Glycosaminoglycan binding proteins [BR:stru00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    115194641 SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  115194641 NCBI-ProteinID:  XP_029610357 LinkDB All DBs Position 5:complement(57623248..57714235) Genome browser AA seq 1662 aa AA seqDB search MSLSLSPQGTSQEPCNGLDCSGGCNCNPEKGGRGRPGALGPVGPGGPEGFPGDQGPFGQK GEKGHVGRMGPSGLKGDKGPMGVPGFPGNDGVPGHPGQDGGRGLPGFDGCNGTQGDPGPR ALDGGIPGASGLPGPKGPKGQKGEPVYVGTRGGAPGLPGLDGVPGPGGRPGDIGPSGPEG LLGNPGPPGPPGPVGSPSLGFRGEPGDKGNTGPPGPRGVPGDEPLVGSSITTIYKGDKGE GGYKGVRGPSGRPGLPGPFGYPGEKGENGILGYPGGRGPPGFNGPPGSPGRQGFTGSPGF PGQPGYSGPKGDQGEQGPPGPPIYADTQGLAVQGAPGDNGIDGFPGQPGDAGTPGFPGQP GRPGDSFGDGRGGSPGFPGTPGPKGERGNPGRQSYGPEGLPGGPGLPGPPGPPGPPGRSV NIQPGRFDNLPGAPGRPGGQGPPGASGYKGPKGELGDCNCLGGGTTGGVGAPGAPGADGR PGAFGRKGESGDPGIPGFGGQPGTPGRVGERGFFGRKGEKGASFYPSFSRGIKGEQGAQG LRGPPGNMGRPGRDGLPGSPGQPGPPADVDGYGTIGERGFPGLSGAKGRAGEPGENGIGY QGTIGSRGFPGDSGFTGLPGQPGLPGPPGLTLPCRLPGEDGNPGFPGIPGRLGPKGEPGF PGGPGRPGFDGGKGERGDPGYGGQPGPQGFPGPRGDAGGPGFPGEGRPGAPGKNGLPGRP GEKGRLGEVLGSSTGLPGTPGFPGGPGDKGEPGASGLPGGSGFDGRSGIPGAKGERGTDG YPGTLGLPGLPGDRGNGFPGPAGPSGSKGLPGSPGYPGLKGARGDAGFPGPTGRKGQPGQ PGGDGSSGLRGLPGPPGPGGRNGIPGGPGRKGESGYPGLAGFPGMPGNPGRPGGPGGKGA PGFSGKDGLPGVFGAPGPKGDEGYRGLPGPPALPPRIDYLEKGQRGDNGANGLPGFPGPR GDKGFPGQPGRQGLPGLPGYADRAKGEPGLPGLPGRPAGPGYPGPKGSPGIIGFPGMPGP RGDDGRPGFPGNPGVPGQPGAKGERGDSSGYPGSPGAKGESGTPGYPGGQGANGAPGDNG FPGGPGFSGQKGAPGVPGRPGLLGTPGFTGAKGLNGYPGGRGLDGTTGRPGSPGSSGEKG LPGSPGLDGLNGLAGPKGIPGTPGYSEEGRPGTPGAAGLKGERGSSIPGPPGYNAEKGAR GESGGPGMTGFPGLPGRRGETIGSNIPGPLGDPGLPGLDGEGGYGGPPGPPGPPGPSTAQ GDRGDAGLPGFPGTPGRRGDPGGPGGPGREGSPGFNGERGDSGYSGVSGTKGYPGDPGYY GGKGPKGRKGSSGRKGAPGITLPPSNFQTPYGEVGGPGLNGAPGAMGEPGNPGIPGRGGP KGRPGAVGKLGRNGGSGLNGPLGDPGSPGFPGPSGSQGLPGKPGLQGPPGSVARSRSVGF TLVKHSQNNQVPMCPQGMSRLWEGYSLLYVEGQEKAHNQDLGMAGSCLPRFSTVPFLYCT PNEICYYASRNDKSYWLSTTAPIPMMPVGEEAISQYISRCSVCEAMSQAVAVHSQDLTIP TCPAGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGAKGTCHFFAN KYSFWLTTVEPSREFNPPPMDTLKGGNQLSRVSRCQVCSKIL NT seq 4899 nt NT seq  +upstreamnt  +downstreamnt atgtctctttctctttctccccaggggaccagccaggagccctgtaatgggctggactgt agcggaggatgtaactgtaacccagagaaaggtggcagggggcgtccaggggcactgggg ccagtaggacccggtggaccagaggggttcccaggcgaccaagggcctttcgggcaaaaa ggagagaagggccacgtcggacgcatgggcccctctgggctgaaaggagacaaggggccc atgggcgtcccagggttcccaggaaacgacggagtcccaggtcacccaggtcaggacggt ggcaggggtctaccagggtttgatggatgtaacggtacccagggagacccaggtcccaga gctctagacggaggaatacctggagcttcaggactccctgggcctaaaggtcctaaaggg cagaagggagaacctgtatatgttggaaccagagggggagctcctggtttgcctggactg gacggtgtacctggtcctggaggaaggcctggtgacatcggccccagtggtcctgaagga ttacttggtaatccaggtccccccggtccccctggtcctgtagggagccccagcctaggc ttccggggggagccaggagataagggggaagggggttacaaaggagtacgtggaccatct ggtagacccggcctaccaggtccttttggctatcctggagagaagggagagaatggaatt ctggggtatccagggggacggggtcctcctggttttaatggacctcccggatctccagga agacagggattcacaggcagtccggggttccccgggcaaccaggttacagtggacctaag ggtgaccagggggaacaggggcctcccggaccacccatctacgcagacacacaagggctg gctgttcaaggagcaccaggtgacaacggtatcgacggcttccccggccaaccaggtgac gctggcactccagggtttccaggacaaccaggacgaccaggcgactccttcggcgatggt cgaggaggcagcccagggttccctggtaccccagggcctaagggagagaggggtaacccc ggcagacagagttacggccctgagggcctaccaggaggaccaggcttaccaggaccccct ggacctcccggaccaccaggcagatctgtcaacatccagcccggcaggtttgacaatcta ccaggagcgccaggacgaccaggaggccagggaccacctggagccagcggatacaaagga cccaaaggggaactgggtgactgtaactgcctgggaggaggcaccacgggtggggtgggg gcaccgggggctcctggggctgatggaagacctggggccttcggcaggaagggcgaaagc ggagacccaggcatacccggtttcggaggacaaccaggaacacctggccgtgtgggcgag aggggtttctttgggcgtaaaggagaaaagggtgcctccttctacccctcgttcagcaga gggattaagggtgaacagggggcccagggccttcgagggccccctggaaacatgggtcga cccgggagagacggacttcctgggtcccccggacagcctgggcctcctgctgatgttgat ggctatggaaccattggagagagaggattcccagggttgtcaggcgccaaaggtcgcgcc ggtgaacctggagagaacgggattggctaccagggtaccatcggctcccgtgggtttcca ggcgactcgggctttacggggttaccagggcaacctggtttacctggccctccagggcta acgctaccatgtcgtctacctggtgaggatggaaaccccggcttccccggaatacctgga agactaggtcccaagggcgagccaggtttccctggtggtcccggtcggcccggttttgac ggagggaagggagagagaggagacccaggttacgggggccagcctgggccacaaggtttc cctggccccagaggagatgcggggggcccaggtttcccaggcgagggtcgtccaggggcc ccagggaagaacgggctcccggggcggccgggggagaagggccggctaggggaggtgctg gggtcctcaacagggctccctggaacacctgggttcccaggaggaccaggagacaaggga gagccaggagcatcaggacttcccggaggatcaggttttgatggtcggtcgggcattccc ggagctaagggtgagcgcggtacggatggctaccccggaactctaggtcttcctggactt cctggagacagaggcaatggatttcccggtcctgctggaccatccggaagcaaaggatta cccggatctccaggctaccccggtttaaaaggagccagaggtgacgcgggcttcccaggc ccaactgggaggaaggggcaaccaggacaaccaggaggggatggatcatcaggactcagg ggccttccgggaccaccgggccccgggggaagaaacggcatccctgggggaccaggaagg aagggcgagagcggttaccctggactggcgggtttccccggaatgccaggtaaccctgga agacccggtggaccaggaggtaaaggagctccggggttctcaggaaaagacggcctgccc ggtgtcttcggagcgccaggacctaaaggtgacgaaggttaccgtggtctccctggccca cccgctctgccccccagaatagattacctggagaagggacagaggggcgacaacggtgcc aacggactacccggtttccctggacctagaggtgacaagggtttcccaggccagcctggt cgtcagggtttgcccggactgcctggttatgctgacagggctaaaggagaaccaggactt cccggtctccccggacgcccagccggtccaggctacccaggccctaaaggatctcccggt atcatcggcttccctggcatgcctggaccaaggggtgacgatggcaggcctggcttccct ggtaaccccggagtccctggtcagccaggtgctaaaggggagagaggtgactcgtccggc taccccggaagtcccggagctaaaggtgagtccggaacccccggttacccaggtggccaa ggtgctaatggcgcccccggcgacaacggtttcccagggggccctgggttcagcggacag aagggagcaccgggagttcctggaagacccggactcttgggtacccctggtttcactggg gctaagggtctgaacggatacccagggggaagaggtctcgacgggacgactggccgcccc ggctcccctggatcatctggagaaaaaggtctgccgggatctcctggtcttgatggactc aacggactggctggaccgaagggtataccaggaaccccgggttatagtgaggagggtcgc cccggcacccctggagcggccggtctgaagggagagaggggatcctccatcccaggaccc ccgggatacaacgcggagaagggagcgagaggagagtcagggggtcctggtatgacaggc ttcccaggtctgcctggtcgtcgtggggagacaatcggctccaatatccctggacctctg ggagacccaggcctgcccggactcgatggagaaggaggttacggtggtcctccaggcccc ccaggcccaccggggcccagtacggcccagggagacagaggtgacgctgggctacctggc ttccccggtacccctgggagacgtggagatcctggaggtcccggtggcccaggaagggaa ggcagccctggattcaatggagagagaggcgactctgggtacagtggagtgtcaggaacc aaaggctaccctggagatccaggatattacggagggaaaggacccaaaggaaggaaaggt tcttctggtcgtaagggggccccaggtataactttacccccctcgaacttccagactccc tacggagaagtgggaggccctgggctcaacggcgctccaggggccatgggagaaccaggc aatcctggcattccaggcagagggggtcctaaaggaaggcccggtgcggtggggaagctg gggaggaacggagggtcaggtctgaatggacctctgggagaccctggttctcctggtttc cctggaccttccggatcacaaggtctgcctggtaagcctggtctgcagggtccccccggc agtgtggcccgcagcaggagtgttggtttcaccctggtgaaacacagtcagaacaaccag gtacccatgtgtccccagggcatgtcccggctctgggagggatacagtctgctgtacgta gaggggcaggagaaggcacacaaccaggacctcggtatggcgggctcctgcctcccccgt ttcagcactgtccccttcctctactgcacgcccaacgagatctgttactacgccagccgc aacgacaagtcctattggctgtccaccactgcgcccatccccatgatgccggtgggagag gaggccatcagccagtacatcagcaggtgctccgtgtgcgaggccatgtcccaggctgtg gccgtccactcccaggacctcaccatccccacctgccctgctggctggaggtccctctgg atcgggtactccttcctcatgcacacagctgccggggctgagggcggaggccagtccctt gtttcacccgggtcctgtctggaagacttccgtgcaactcccttcatcgagtgtaacggg gctaagggcacctgccacttctttgccaacaagtacagcttctggctgaccacggtggag cctagtcgggagttcaacccccctccgatggacacactgaagggaggcaaccaactgagc agagtcagtcgctgtcaggtctgcagtaagatcttgtag

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