Salmo trutta (river trout): 115194648
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Entry
115194648 CDS
T08542
Name
(RefSeq) ras-related protein Rab-39B
KO
K07925
Ras-related protein Rab-39B
Organism
stru
Salmo trutta (river trout)
Pathway
stru04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115194648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115194648
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
stru04031
]
115194648
Membrane trafficking [BR:
stru04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
115194648
GTP-binding proteins [BR:
stru04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
115194648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
AAA_22
TniB
Motif
Other DBs
NCBI-GeneID:
115194648
NCBI-ProteinID:
XP_029610368
Ensembl:
ENSSTUG00000002101
LinkDB
All DBs
Position
5:complement(58433591..58438565)
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AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHDWLEEARSHVQPHSIVFLL
VGHKCDLEPQRQVTRQEAEKLAGAYGMRYVETSARDAINVEHAFTELTRDIFHLVRSGDI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatttggctgtaccagttccgactcatcgtcattggggactcgacggtgggg
aaatcgtgtttgatccggcggttcacagagggacgcttcgcccaggtgagcgaccccaca
gtcggcgtagatttcttctctcgcctggtggagattgagccggggaaacggatcaagcta
cagatctgggataccgcgggacaggagcgtttcaggtccatcaccagagcctactatcgt
aactcggtgggcgggctcctgctgtttgacatcacaaaccgtcgctccttccagaacgtt
catgattggctagaggaggcccggagtcacgtccaaccacacagcatcgtgttcctattg
gtcggacacaagtgtgacctggagcctcagcgtcaggtgactcgtcaggaagctgagaaa
ctcgccggcgcctacgggatgcgttacgtagaaacctcggcccgcgacgccatcaatgtg
gagcacgccttcacggagctgaccagggacatcttccacctggtgaggagtggtgacatc
actatccaggagggttgggaaggggtgaagagcggcttcgtccccaacgtggtccactcc
tccgaggaggtcaccaagagcgaccggcggtgcctctgctga
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integrated database retrieval system