Salmo trutta (river trout): 115195136
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Entry
115195136 CDS
T08542
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
stru04054
]
115195136
Pattern recognition receptors [BR:
stru04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
115195136
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
TIR_2
LRR_9
LRR_NXF1-5
LRR_LRWD1
LRRNT
Motif
Other DBs
NCBI-GeneID:
115195136
NCBI-ProteinID:
XP_029610803
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Position
6:complement(49925724..49937448)
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AA seq
1004 aa
AA seq
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MPNCIQFKTQSYAAPVFTVTVFLCQLSEVDVKPLTVTLNITMPGQRSGSTFSQLRLFLCF
LMYCWVLADPVCGYFLKNCTIRGNLSDPSDMIVLCQKRNLEVIPIDIPRNVSVLNVAMNN
ISKIGKLDFKGLSNLKNLNMSRNQISQVDDGSLGHLEALQELGLAHNRLTTLSDHLFQGL
ANLSLLHLDNNLISTIGSSSFQLLSSLKTVNLTENNLYNMKDVQPIVQLPHLHELYIGSN
RFTSFQSQEISNTSIELRLLDLSRNPLGIFRITADVLPYLEVLDIAYCGQLGRMEWDVLD
RSFLSNIKGLNLSGIEMSFERMAMVLQTVNSSLVYLRMYDIGEDRVKALTDIACQIPTLS
LLRLHHNNISALSEEFLQSCKQVTKVDLENNNIIQLSAVSFRSMEQLSTLKLGHNMLSSV
PDATRNVSTLKFLDLSFNIINKLGCSDFANLTGITQLFLFHNQISKLPGCVFQDLKELRI
LKLGSNKILTLNDDFMSGLYKLEYLSISYNKLSSISKGDFKGLSSLKTLLLFDNQIASLE
DGAFEGLVNLTELRLQSNKITQIDIRKTVLSGLPRLRTLDISCNYITYVNDDKLDPPPFS
HLTSLENLRIFSQRHKGLSHLPINFLEGLKSLLSFQAGSLNIKDLHPDTFIHTPKLWFLD
ISKNEFTALTSKLFHPTPSLNRLYLPKAQLQSLDFLIGANLSRVTYLQVRKNDITAFNET
VLRSLPALTYLDMQDNPFTCGCSDAWFVQWMVSDNQTQVVGAGEFTCNYPADLKGTKLLY
IELQFCTVHLGLYYYISTTCLVLLTLVASFAYHFLKWQVIYGYYLFLAFLYDTKQRNKHT
PHGCQYDAFISYNAHDEPWVLRELLPELEGEQGWKLCLHHRDFQPGKPIIDNIMEGIYGS
RKTICVISHRYLESEWCSREIQVASFRLFDEQKDVLILVFLEEIPTHQLSPYHRMRKLVK
RRTYLSWPRAGEHTGVFWQQLRLALETKDGPAEENPILSGVEAL
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgccgaactgcattcagtttaagacccagtcctatgctgcaccagtgttcactgtgact
gtcttcctctgtcaattatctgaagtagatgtcaaacccctcacagtgacactcaatata
accatgccaggacaacgaagtgggtctacattctctcagctgagactctttctttgtttc
ctgatgtattgttgggttcttgctgatccagtctgtgggtacttcctgaaaaactgcaca
atccggggtaatctcagtgacccttctgacatgatagtactctgtcaaaagaggaaccta
gaagtcatacctatagacattccacggaatgtaagtgttttaaatgtggccatgaataac
atttccaaaattggaaagttggattttaaaggcctgtcaaacctcaaaaatctgaacatg
tcaagaaaccagatctctcaagtggacgatgggtctctcggacacctagaggctcttcag
gaactgggtttggctcataacagactcacaaccctgtcagaccacttgtttcagggcctg
gccaacctctccctgctacatctggacaacaacctaatctcaaccatcgggtcctcatcc
tttcaacttctctccagtttgaagacagtgaatttaaccgagaacaacctttataatatg
aaggacgttcagccaattgtacaattaccacacttacatgagttgtacattgggagcaac
agattcacctctttccagtcacaagaaatatcaaacacttctatagagctgaggctgttg
gatttatccaggaatccattgggaatcttcaggatcacggcagatgttcttccttacctt
gaggtgttagacatcgcctactgtggccaacttggacgcatggaatgggatgtgctggac
aggtcttttctgagcaacatcaaaggtctcaacttgagcggcattgagatgtctttcgag
aggatggctatggtgctgcagactgtcaactcctcattagtctatctgagaatgtatgac
attggtgaagatagggtcaaggctctcactgatattgcctgccaaatacctacacttagc
ttgctccgactgcatcataacaacataagtgctttgtctgaggaatttctgcagtcatgt
aaacaagtgaccaaagtggacttagaaaataataatattattcagttgtcggcggtatca
ttcagatcaatggagcaactaagtactttgaaactgggccacaacatgctttcatctgta
ccagatgccacaagaaatgtatccacactaaagttcctggatctcagcttcaatatcatc
aataaactaggctgctcagatttcgccaatcttacaggaatcacacaactctttcttttc
cacaatcaaatctccaaacttccaggatgtgtattccaggatttgaaagaattaaggatc
cttaaactgggatcaaacaaaatcctgaccttgaatgatgactttatgagtggtttgtac
aaactagaatatttgtcgatatcatacaataagctgagctcaatctctaaaggagacttt
aaaggcttatcatcgctcaagactctgcttttatttgacaatcagattgctagtcttgaa
gatggagcctttgagggattggtgaatcttacagaacttagactacagtcaaataagatc
actcaaatagacataagaaagactgtgctctcaggacttccacgcttaagaactcttgat
atatcctgtaattatatcacatatgtaaatgatgataaattagaccctccacccttctct
catctgacatctctggagaacctcaggatatttagtcagcgtcacaagggactgtctcat
ctaccaatcaactttcttgaaggtctgaaatctttattgtcattccaggcagggagtctt
aatattaaggacctgcacccagacacattcattcacacacccaagttgtggttccttgat
atcagtaagaatgagttcacagcactcacgtcaaagctgtttcacccaaccccaagtctc
aacagactttatctgcccaaagcccaacttcagtccttagatttcctcataggagcaaac
ctcagtagagtcacttacttgcaggtgagaaagaacgatataacagcattcaatgagaca
gtgttgcgttctctccctgccttgacatacctggacatgcaagataatcctttcacctgt
ggctgcagcgatgcttggttcgtccagtggatggtgagcgacaaccaaacacaagttgtt
ggtgcaggagaatttacctgcaactatcctgccgatctaaagggcaccaagctgttgtac
attgagcttcagttctgtacagtacacttaggactttactactacatctctaccacttgt
ctggtcctcctcaccctggtagcatcctttgcctaccacttcctgaaatggcaggtaatt
tacggctattacctcttcctggctttcctctatgacaccaagcaaaggaataagcacact
cctcatggctgtcaatacgatgcgttcatctcatacaatgcccacgatgagccctgggtc
ctgagggagcttctgccagagctggagggagagcagggctggaagctgtgtctccaccac
cgggactttcagccaggcaaaccaatcatagacaacattatggaaggcatctacggaagc
cgcaagaccatctgtgtgatcagccaccgctacctggagagtgagtggtgctcccgggag
atccaggtggccagcttccggctctttgatgagcagaaggacgtcctgattctggtgttc
ctggaggagatccctacccaccagctgtcaccctaccaccggatgaggaagctagttaag
agacgcacctacttgagttggcccagagctggggagcacaccggggtcttctggcagcaa
ctacggctggctttagagaccaaggacggccctgctgaagaaaatcccatcctctctggg
gtggaggcactgtga
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