Salmo trutta (river trout): 115195292
Help
Entry
115195292 CDS
T08542
Symbol
ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115195292 (ptchd1)
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
Other domain-containing proteins
Patched domain-containing proteins
115195292 (ptchd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
115195292
NCBI-ProteinID:
XP_029610922
Ensembl:
ENSSTUG00000026551
LinkDB
All DBs
Position
6:368749..438183
Genome browser
AA seq
942 aa
AA seq
DB search
MVGVPTVSSRWWERLKTLCPERARRMLRQVLQAGLRSSFQALGRFVASHPVFFASAPVLV
SVLLGASFSRYRVEGNVESLLVPKHSLAKIEGNLVDSLFPVNRSKHTLYSDLQTPSRYGR
VIVTSRRGSILDPLHTDLVLKLHRAVVQLQVPVLGFNYSFSHLCLLDDKNTCIIDDIIRA
LEDSQSARFANRSSLPLRYPITRLADGRMAYIGHQLGGVQAWGAGPAVQGPGGVSGRGQG
VRSARALQLTYYLQARGALTDRVASQWEQAFCGELGQFGAGHPELSLYPFTSSSLRTDFQ
ASSVLARRPLLASVCVCLVLAVGCCSMRDCVRAKPWLGLLALLSIALSGLTAAGILNLTG
TTYNSTYLGVPFILLGHGLFGTFEMLSSWRRTREDQHVKERVASVFSDVMLRYSGATLLH
QVSLGLAASPLTNLEAVRLFCRCAALGVTVGYLYTLSFYATCLVATGYLETGYRHGCFCR
RVPKKGALDTKPRWYRCLMYTRYQDETHSQTHSHTPNSTHTHTPMRPQDSHLLLGCVQRC
YGDWITNTYVKPFMVLLYLVYISFGLMGFLQVSQGSEPSSLVAMDTGTLLYARAQQRYFS
SYSPVIGFYVYESAPYWNTSVQRDLLEYAKGFQRISWLESYLDYLTERNLSTTSQSRDSF
TRMLRLSFLRQPQFAHFADDIIFAERDEGEEPEMAASRVFLVAKTTENKREEMSVLLDTL
RRLSLTSRVRFLIFNPSFVYLDRYATAVSSPLRHSLMAVLFLLGLSSLAVVEPLVAVWLS
LTLLSVQFGVLGFMTLWGVELDCVSVLCLISALGHSADCCGPLLATFSSGRGDSRTVWVR
LALERHGVPSLQTLICYTAALLPLAAVRSNLTRSLFRCLVLTAFCSALHALAFLPTLLTF
LPPAKKTGSRQGDRGEGEGLREEVECVEMVDSTRVVDQITTV
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcgtgcccactgtttcctctcgctggtgggagaggctcaagacgttgtgtcca
gagcgcgctaggaggatgctgcgccaggtgttgcaggcaggcctgaggagctccttccag
gctctgggtcggtttgtggcgagccacccagtattctttgcctccgcccccgtactggtg
tctgtcctgctgggggccagcttcagtcggtacagagtggaaggtaacgtggagtcgctc
ctggttcctaaacacagtctggcgaagatagaaggaaacctggtggactccctgtttcct
gtcaacagatctaaacacaccctgtactctgacctgcagactccaagtcgttacggccgt
gttatagtcacctctaggagaggcagcatcctggaccctctacacacagacctagtactc
aagctccatcgtgctgtcgttcagctccaggttccagtgttggggttcaactactctttc
tcccacctctgtcttctcgacgacaagaatacctgcatcatcgatgacatcatccgagcc
ctggaggacagccaatcagcgcgcttcgctaaccgttcttcccttcctctgcgctaccca
atcacacgtctggctgatgggcggatggcctacattggtcaccagttaggaggggtgcag
gcgtggggggcggggcctgcagtacagggtccaggtggtgtgtctggtcgaggccaggga
gtccggagcgctagggctctgcagctgacctactacctgcaggctcgcggcgccctgacg
gacagggtggctagccaatgggagcaggcgttctgtggcgagctgggccagtttggggcg
ggacaccctgaactgagcttataccccttcacttcatcctctctaaggacagacttccag
gcgtcgtcagtgctggctcggcgccccctgctggccagtgtatgtgtgtgtttggtgtta
gccgtgggctgttgttcaatgagggactgtgtgagagctaaaccctggctagggcttttg
gctctgctgtctatcgctctttctggtctcactgctgctggcatccttaacctgactgga
accacttacaactcaacctacctgggggtaccattcatactgctgggtcacggactgttt
ggcacatttgagatgctatcgtcatggagaaggacacgtgaggaccaacatgttaaggag
cgtgtagctagcgtattctctgatgtcatgctgcgttactcaggagctacactgctacat
caggtgtctctgggtctggctgcgtctcctctgaccaacctggaggctgtccggctgttc
tgtcgctgcgctgcattgggcgtaaccgttggttacctttacaccttgtccttctacgcc
acctgtctggttgccacgggttacctggagacagggtacagacacgggtgtttctgccgc
cgcgtccccaagaagggagcgctggacaccaagccacgctggtaccgctgtctcatgtac
acacgctaccaggacgagacacactcacaaactcactcacacacacccaactctacacac
acacacacgcctatgcgaccccaggactcacacttgttgctaggctgcgtgcagcgttgc
tatggagactggatcaccaacacctatgtgaagcccttcatggttctgctctacctcgta
tacatctcctttggcctgatgggcttcctacaggtgagccagggctcggagcccagttct
ctggttgctatggatacagggacattgctgtatgctcgcgcccagcagcgctacttctcc
tcctactctcctgtgattggcttctatgtctatgagagcgccccctattggaacacctcg
gtacagcgagacctgctggagtacgctaaagggttccaacgaatcagctggctggaaagc
tacctggattacctgacagaacggaacctctccactaccagccaatcccgtgatagcttt
acgcggatgctccgcctctccttccttcgccagccgcaattcgctcattttgccgatgac
atcatcttcgctgagcgcgatgaaggggaggagccagagatggcagcgtcacgtgtcttc
ctggttgccaagacaacggagaacaagagggaggagatgtccgtcctattggacacgctg
agacgtctgtctctgacgtcacgcgtccgctttctcatcttcaacccctccttcgtctac
ctggacaggtatgctacagcggtgagctctcctctgcgccactccctgatggcggtgttg
ttcctgctgggtctgtcgtctctagcggtggtggagcccctagtggcagtgtggctcagt
ctcaccctcctctctgtccagtttggtgttctgggcttcatgactctgtggggcgtggag
ctcgactgcgtgtctgtgctatgtctgatttcagcactgggtcactctgcagactgctgt
ggtcctctactggccaccttctcctctggccggggggacagccggaccgtgtgggtcaga
ctggcgttggagagacatggcgtcccctctctacagacgttgatctgctacaccgcagcg
ctgctccctctggccgccgtccgctccaaccttacacgctcgctgttccgttgcctagtg
ctgacggcgttctgctcagcgctccatgccttggccttcctgcccacgctgctcaccttc
ctgccacccgccaagaagacaggaagtagacagggagacagaggggaaggggaggggctt
agagaggaagtggagtgtgtggagatggttgacagcaccagggtggtcgaccagatcacc
accgtctga
DBGET
integrated database retrieval system
