Salmo trutta (river trout): 115195341
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Entry
115195341 CDS
T08542
Name
(RefSeq) polypyrimidine tract-binding protein 2-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115195341
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115195341
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
115195341
NCBI-ProteinID:
XP_029610978
Ensembl:
ENSSTUG00000014622
LinkDB
All DBs
Position
6:complement(5922407..5943551)
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AA seq
527 aa
AA seq
DB search
MDGMGDVAVGVKRGSDELMSTSVYNSGSDMSSISDVTANGSDSKSNGSDSKKLRVEDRME
APPSRVLHIRKLPNETSESEVIALGLPFGKVTNILTLKGKNQAFLELGTEEAAITMINYY
STVTPHVRNVPVFIQYSNHKQLKTDSGNQRAQAVLQAVSAVQGGGTPTSGSIVDLTAASS
PVLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFNDPPTAQQAKIAL
DGQNIYNSCCTLRIDYSKLVNLNVKYNNDKSRDYTRPELPAGDGQPAMDPNMAAAFQGKD
SNSLLGGLSPLNAAAAAAAAAGRVALSGHSGSSGVLLASNLNEEMVTPQSLFTLFGVYGD
AQRVKILYNKKDSALIQMADANQAQLAMSHLNGQKMHGKAIRVALSKHTSVQLPRDGLDD
QGLTKDFTNSPLHRFKKPGSKNFQNIFPPTTTLHLSNIPTDVTEEDLRLLFSNAGGTVNA
FKFFQDHKMALLQMSTVEEAIQGLIDLHNYNMGDNHHLRVSFSKSTI
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggacggtatgggagatgttgcagttggtgtgaagagaggatcagatgagctgatgtca
accagtgtctacaacagtggatctgacatgagcagtatcagtgatgttacagccaatggg
agcgacagtaaatccaatgggagcgacagtaaaaagctgagagtggaagaccggatggag
gctcctccctctcgtgtgctgcacatcagaaaactgcccaatgaaacttcagaatcggag
gtcattgccctggggttacctttcgggaaggtcacaaatatcctgacgcttaaggggaaa
aaccaggctttcttggagctggggacagaggaagcagcaataaccatgatcaactactac
tctacggtaacgccgcatgttcgaaacgtccccgtattcatccagtattccaaccacaaa
caactcaaaacagatagtggaaaccagcgggcccaggcggtcctgcaggcggtgtctgcg
gtccaaggaggaggtactcctacgtcgggctccattgtagatctaaccgctgcatcaagc
cctgtgctcagaataatcattgacaacatgttctacccagtcactctggatgtgctgcag
cagatcttctcaaagtttggcacggtcatgaagataatcacattcaccaagaacaatcag
ttccaggctctgctgcagttcaacgacccaccgaccgcccagcaagccaaaatagccctg
gatggtcagaacatctacaactcgtgctgtacgctccgcatcgactactccaagctggtc
aacctgaacgtcaagtacaacaacgacaagagccgtgactacacccggccagagctccct
gcaggggacggacagcctgccatggaccccaacatggctgctgccttccaaggcaaggac
tccaactctctgctcggtggcctgagcccgctgaatgctgcggcggcggctgctgctgct
gcggggagggtagctctgtctggtcactctggctccagcggcgtgctcctggcctccaac
ctcaacgaagagatggttacgccccaaagtctgtttactctcttcggggtctatggtgat
gcccagagggtgaagatcctctacaataagaaagacagtgctctgatacagatggctgat
gccaaccaagcccagctagctatgagtcacctgaatggacagaagatgcatgggaaagcc
atcagggtggctctgtctaagcacacctcagtgcagctgcccagggatggactggatgac
cagggcctcaccaaggacttcactaactcacccctgcaccgcttcaagaagcccggctcc
aagaactttcagaatattttccctcccaccaccactcttcacctctccaacatcccaacg
gacgtaaccgaggaagacctccgactgctgttctccaacgctgggggaactgtgaacgcg
ttcaagttcttccaggatcacaaaatggcattgctccagatgtcgacggtggaagaggcc
atccagggtctgatcgacctccacaactacaacatgggcgacaaccatcacctgagagtc
tccttctccaaatccaccatctaa
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