Salmo trutta (river trout): 115195364
Help
Entry
115195364 CDS
T08542
Name
(RefSeq) uncharacterized protein LOC115195364 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
stru
Salmo trutta (river trout)
Pathway
stru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115195364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115195364
Membrane trafficking [BR:
stru04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115195364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Gp5_trimer_C
SH3_1
PH
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
115195364
NCBI-ProteinID:
XP_029611014
Ensembl:
ENSSTUG00000019834
LinkDB
All DBs
Position
6:complement(7705862..7829325)
Genome browser
AA seq
2111 aa
AA seq
DB search
MSSVEAGHPFEEGLTVEVGLSPLLDTRGPIPVSNILSPDLSLSPSQNRKGINQLETQLAS
PVPAPGLGGEGITEIRTQSVSSRPLKKDAVQTQGLIPELQDQGGSSTETPRDSEHSPGES
TRDEGWLGEGYTSVELQPASAHPQSDTVGWNEECLAPHPHSLPHIDWPPPSDRSGSEDSE
HSQLLSKTSTSEDRTGPTHSLSGVREEEEEEKEEEDCNVYSQQKQAVESTSCPESAQPNT
VITAEFSDHTDSDHVWLSSTEETEDAIFPYSPTGVFIEITSDLYVDLCTQGVSSDIGQGS
TQPTETEPLQGDSTEPPALDQEAVPLRRIEITVGADFPVTIGTDSRVTIGTDSPVIVGTD
SHVTVGTDSPVIVGTDSPVIVGTDSPVTVGTDSPVIVGTDSPVTVATDSPVTVGTDSPVT
VGTDSPVTVGTDSPVTVGTDSPVTVGTDSPVTVGTDSPVIVGTDSPVCKEQVHRCRDHLE
IHHRIPEPPSPCPVPPSILSLSSLSDSNNHTKASERLWSGSLSTRGQVPEQWSSEVEIKV
AHQSRSNECGDKTNVESHSLTEPATFTSNLLGETNETLDSALEDHPEDSEKFLSLVDYHP
YWCSDNSAVSWLEGECHFSLAEMEELERLQREGYGDTPNQNHTDWRGDISNHTDTTDWRG
DISNHTDTTDWRGGISNHTDTTDWRGDLSNHTDTTGCREANCVANSPTGLSEPLSSYLET
GSLLLDSAEKKGQQPIPHQSPKPPWDRDRQECSNSPEALGLEDSFFTEEDSSYSSYRQTS
SHPDLLQQDCGVRIVRYPYPDVSLNLLSLSSLETILEADPDHSLDNSGTVEDETGDEEDE
EWRKIVRIRPTEEDRGTVLLSGDIIISYVPTFSPSSCRPEDLSSIESSEHQLVLSTFDPD
DPRVMTLPHERDASGSERCSSPTSTSVSYDFDTTSINSEEMEESILPVSGGNANLHKPMK
SKSKGGRAGCSKSSKFSVFAKMPSFRKKNSLKNTKMDSSSRDSPDLGLGRELRGGHRGQG
GDTSDDDSVFLTVQQAFSSGPVGCYETEEEDYSFVPSTPRSSHVRLLFREGPSSPDSTLT
SQPGGLRHDHTRAPEGLHSYKRSKSSDSPNLRMRFAQAQKSLSSLFESRSMDKENEEEQG
SVETGSEGKVGRAKQSLRRLRAKEAELVRRTLSVPVGDGVEGENGGGLRTPRQIHSDYAS
RSASGSALSVPGSPSSLRALNLTDPLTKRGLQDSHSVAEADTPQGCKLDGQRRKGKVPPN
GLSINLSDSGPPYSQDSEAPPANESSPLSPMSPTSLAALANPLSWSPGGAYESTASSMAA
TPDTPVRPMSPKPHSPRSAAQHRAICYPPTASGRASVLSLLLMGQSASVEGLSDPPEKPK
TLKPRAGPLGSSSLSPLEDSEVDSLLTPMFFKQFETSQDGCRPSSQAGGGGKRLAELKTP
GSGPDTTALTIRPPLGHRPDRDPRRHHCCSDDLWIEEETRRKRKLAQMKRGSLGQLSPHC
AEELDKSHAPVSLSTMEAFSGMLLKTHCFSQSTPIGLDCLGWRRRISYPSVIVPDGGGEK
TGLGLGDDLGSDEDLYEEFRSSRHHFGHPGGGGEQLAINELISDGSCVYAEALWDHVTMD
DQELGFKAGDVIEVVDATNKEWWWGRILDSEGWFPASFVRLRVNQDEPMEEYLAQLEEAG
AGENDQPGVGLFLGPGLPCKEQMRANVINEIMITERDYIKHLKDICEGYIKQCRKRIDMF
TEEQLLCIFGNIEDIYRFQKRFLKGLEKRFNKEQPHLSEIGSCFLEHQTGFQIYSEYCNN
HPNACVQLSRRMKTNKYVFFFEACRLLQKMIDISLDGFLLTPVQKICKYPLQLAELLKYT
NPQHRDYKDVEAALNAMKNVARLINERKRRLENIDKIAQWQRSIEDWEGEDILSRSSDLI
FSGELTKISQPQAKSQQRMFFLFDHQMVHCKKDLLRRDMLYYKGRMDMDQMEVVDVEDGK
EKDFNVSVKNALKLRSLAGDEVHLLCAKKPEQKQRWLRAFQDERRQVQHDRETGFSITEV
QKKQAMLNACKSHPAGKPKAVTRPYCDFLLRQKQPSLPSSVPQQQVFMLAEPKRKATTFW
QNIGRLTPFKK
NT seq
6336 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgtggaggctggacatccttttgaggagggacttactgtagaggtgggactt
tctcccttgctagacacccgtgggcccatacctgtttccaacatcctgtcacctgatctg
tctctctcaccatcgcaaaacaggaaggggatcaaccaattggaaacccagttagcctca
cctgtcccagctcctgggctaggcggtgaaggaattacagagatacgaacacagagcgtt
agttcacgacccctgaagaaggatgccgttcaaacccagggcctaatccctgagctccag
gaccaggggggctccagcacagagacacccagggacagtgagcactcacctggggagagt
acgagggatgagggctggctgggggaaggttacacctccgtagagctccaacctgcttct
gctcatccccagtctgacactgtggggtggaatgaggaatgcctggccccccacccacac
tccctcccccacatagactggccacctccctctgacaggtcaggatcagaagactcagaa
cactcacagctgttatcaaagacctcgactagtgaggacaggacaggaccaacccattcc
ctgtccggggtgagagaggaggaggaggaggagaaagaagaagaagattgtaatgtttac
agtcaacagaagcaggcagtagaaagcacatcctgccctgaatcagcacagccaaacact
gttataacagcggagttctctgaccatactgactctgaccatgtttggttgtcaagcaca
gaggagacggaggacgctatattcccctatagtcctacaggagtcttcatagagatcact
agtgatctgtatgttgacctctgcacacagggtgtttctagtgacataggccaagggtca
acccaacctacagagactgagcctcttcagggagacagcacagaaccccctgccttagat
caggaggctgtaccactgagaaggatagagataactgtgggagcggactttcctgttacc
ataggaacagactctcgtgttaccataggaacagactctcctgttatcgtgggaacagac
tctcatgttaccgtgggaacagactctcctgttatcgtgggaacagactctcctgttatc
gtgggaacagactctcctgttaccgtgggaacagactctcctgttatcgtgggaacagac
tctcctgttaccgtggcaacagactctcctgttaccgtgggaacagactctcctgttacc
gtgggaacagactctcctgttaccgtgggaacagactctcctgttaccgtgggaacagac
tctcctgttaccgtgggaacagactctcctgttaccgtgggaacagactctcctgttatc
gtgggaacagactctcctgtgtgtaaagaacaagtccatcgctgccgtgatcatctagag
atccaccacaggatccctgagcctccctctccctgccctgtgccaccctcaatcctttct
ctgtcctccctctctgactccaacaaccacaccaaggccagtgaaaggttgtggtcgggg
tctctcagtacgaggggccaggtgccagagcagtggtcctctgaggttgagataaaggta
gcccaccagagcaggtcaaatgagtgtggggataaaactaatgttgagtcccattccctg
accgagcccgcaacatttacctcaaacctcctaggggagaccaatgagactctggacagc
gctcttgaagaccaccctgaggactctgagaagttcctgtccctcgtggactaccaccct
tactggtgcagtgacaactcagccgtgtcctggctggagggtgagtgtcacttcagcctg
gctgagatggaagagctggagaggcttcagagagagggttacggagacacccctaatcag
aaccatacagactggagaggagacatctctaaccatacagacactacagactggagagga
gacatctctaaccatacagacactacagactggagaggaggcatctctaaccatacagac
actacagactggagaggagacctctctaaccatacagacactacaggctgtagggaggct
aattgtgttgcaaacagtccaacaggcctctctgaacccttatcttcctacctggagact
ggaagcctgctattggacagtgcggagaagaagggccagcagcccattccccaccaatcc
cccaagcctccctgggacagagacagacaggagtgtagcaactcacctgaggctttagga
ttagaggacagtttttttactgaggaggacagctcatacagctcctaccgccagaccagc
tctcaccctgacctcctgcagcaggattgtggggtgaggatcgtgaggtacccctatccc
gatgtcagtctcaacctgctctcccttagtagcctggaaaccatcctagaggctgatccc
gaccactccctggacaactctgggacagtggaagatgagacgggagatgaggaagatgag
gagtggagaaagattgttaggataaggcccactgaggaggacagaggcactgttcttctg
tctggtgacatcatcatatcctatgtgcccactttcagcccatcgtcgtgtcgtcctgag
gacttgtccagtatcgagtcgtcagagcaccagctggtcttgtcgacctttgaccccgat
gaccccagagtcatgaccttaccacacgagagggacgcctcgggcagcgagagatgctcc
agtcccacctccacctctgtgtcctatgattttgacaccaccagcattaacagtgaggag
atggaagagtccatcctgcctgtctcaggggggaatgccaacctccacaaacccatgaag
agcaaatctaaaggcggccgggcggggtgctccaagagctccaagttctctgtcttcgcc
aagatgccttctttcaggaagaagaacagtctgaagaacaccaagatggacagctcgtcc
cgggactcacccgacctgggcctgggaagggagctgaggggaggacataggggacagggg
ggagacacctcagacgatgacagtgtcttcttgacggtccagcaggccttctcctccggt
ccggtgggttgctacgagacagaggaggaggactacagcttcgtcccctccacgcctcgc
tccagccacgtccgcctgctcttcagggaggggcccagcagcccagactccaccctgacc
tcccagcccggaggtctcagacacgaccacactcgggcccccgagggcctgcacagctac
aagaggagcaagagctcagacagccccaacctccgcatgcgctttgcccaggcccaaaag
tccctgtccagcctgtttgagtctcgctccatggataaggagaacgaggaggagcagggg
agcgttgagacagggagtgaagggaaggtggggcgagccaaacagtccttgaggaggctg
agggccaaagaggctgagcttgtgaggcggaccctgtctgtcccggtcggggatggggtc
gagggagagaacggtgggggtttgagaacgcccagacagatccacagtgactacgcatcc
cgctcggcctcaggctcagctctcagtgtccctgggtccccctcctctctcagggctctg
aatctcaccgaccccctcaccaagaggggcctgcaggacagtcacagcgtggccgaggcc
gataccccacagggctgcaagttggatggccagaggaggaaagggaaagtcccgcccaac
ggcctgtcaatcaacttatcagactccggcccgccgtactcgcaagactctgaggctccg
cccgcaaatgaatccagccccctgtcgcccatgagccccacctccctggctgcattagcc
aatccgctgtcctggtccccagggggagcctatgagagcacagcgtctagcatggcagct
acaccagacacaccagtgagacccatgagccccaagccccacagccccagatctgctgcc
cagcacagggctatctgctacccccccactgcctctggccgggcctcagtcctgtccctg
ctcctcatgggccagtcagccagtgtagagggcctgtctgacccgccagagaagcccaag
accctgaagccccgagcaggaccgttaggctcctcctcactcagtccattggaggacagc
gaagtggacagtctgcttactcctatgttcttcaaacagtttgagaccagtcaggatgga
tgtagacccagcagccaggcagggggaggagggaagaggctagcagagctgaagactcct
gggtctggaccggacactactgccttaaccatcagaccaccactaggccacaggccggac
agggatccgagacgccaccactgctgctcagatgacctgtggatcgaagaggaaacgaga
cggaagcggaagctggcccaaatgaagaggggaagcctgggacaactcagcccacactgt
gctgaagagctcgacaaatcgcatgctccagtgtccctgtcgaccatggaggcattctct
gggatgctcctgaagacccactgcttctcccagagcacccccatcggtctggactgtctg
ggctggagacgacgcatctcctacccctcggtgatagtaccagacgggggtggagagaag
accggtctggggctgggtgatgatctaggcagtgacgaggacctgtatgaagagttccgc
agctccagacatcactttggacacccagggggaggaggggaacaactggccataaatgag
ctgattagtgatgggagctgtgtgtatgccgaggccctgtgggaccatgtcactatggac
gaccaggagctgggcttcaaggcgggggatgtcatcgaggtagtggatgccaccaacaaa
gagtggtggtggggacgcatcctggacagtgagggctggttcccagccagcttcgtccgg
ttgcgtgtgaaccaggatgagcctatggaggagtatctagcccagctggaggaggctggg
gctggggagaatgaccagccaggcgtgggcctgtttctgggaccaggcctgccttgtaag
gaacagatgagggctaatgtcatcaatgagatcatgatcacagagagagactacatcaaa
cacctcaaagacatctgtgagggttacatcaagcagtgccgtaagaggatagacatgttc
acagaggagcagctgctgtgtatcttcgggaacatcgaggacatctaccgcttccagaaa
aggttcctgaaaggtctggagaagaggttcaacaaggagcagccgcacctcagcgagatc
ggctcctgcttcctggaacatcaaacaggcttccagatttactcggagtactgtaacaac
caccccaacgcctgtgtgcagttgtcccggcggatgaagaccaacaagtatgtgttcttc
ttcgaggcttgtcgtctgctccagaagatgattgacatctcgctggatgggttcctgcta
acgcccgtccagaagatctgcaagtaccctctgcagctggccgagctactgaaatacacc
aacccccagcacagggactataaggacgtggaggctgccttgaacgccatgaagaacgtg
gccaggctgatcaacgagaggaagcgacgcctggagaacatcgacaagatcgcccaatgg
cagcgctccatagaggactgggagggagaagatatcctcagtagaagttcagatctgatc
ttctctggagagctgacgaagatctcccagcctcaggctaagagccagcagcgcatgttc
ttcctcttcgaccaccagatggtccactgcaaaaaggacctcctgcgcagggacatgctg
tactataagggtcgtatggacatggaccagatggaggtggtggatgtggaggacgggaag
gagaaggacttcaacgtgtcggtgaagaacgctctgaaactgcgctcgctggcgggggac
gaggtccacctgctgtgtgccaagaagcctgagcagaaacaacgctggctccgagccttc
caggacgagaggaggcaggtgcagcacgaccgcgagacaggattctccattactgaggtc
cagaagaaacaggccatgctcaacgcctgcaaaagccatccagctgggaagcccaaagcg
gtgacccggccctattgtgacttcctgctccgtcagaagcagccatctctgcccagcagc
gtgccccagcagcaggtcttcatgctggctgagcccaaacgcaaggcaaccaccttctgg
caaaacatcggcagactgacgcctttcaagaagtga
DBGET
integrated database retrieval system
