Salmo trutta (river trout): 115195479 Help Entry 115195479         CDS       T08542                                  Name (RefSeq) brother of CDO-like isoform X1   KO K20020   brother of CDO Organism stru  Salmo trutta (river trout) Pathway stru04340   Hedgehog signaling pathway Brite KEGG Orthology (KO) [BR:stru00001]  09130 Environmental Information Processing   09132 Signal transduction    04340 Hedgehog signaling pathway     115195479  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:stru04515]     115195479 Cell adhesion molecules [BR:stru04515]  Immunoglobulin superfamily   Other    115195479 SSDB OrthologParalogGFIT Motif Pfam:  Ig_3 I-set Ig_2 fn3 ig FN3_DSCAM-DSCAML_C C2-set_2 Pur_ac_phosph_N Ig_VEGFR-1-like_5th V-set Fn3_ROS1 Ig_4 Ig_5 Fn3_VIN3 Ig_PDGFR_d4 G6B Motif Other DBs NCBI-GeneID:  115195479 NCBI-ProteinID:  XP_029611222 Ensembl:  ENSSTUG00000040429 LinkDB All DBs Position 6:complement(13806227..13851043) Genome browser AA seq 1070 aa AA seqDB search MSGTLDWTPWMKKRRARVLSALSAVLLCCIQSGATVSGTSDEVPVFTEEPLSVVQKLGGR VILRCSTQPPSANISWWLNGRELVAGAVEDLGVVLEPGTLLIPALTNLTLGRYQCVASTN AGALASVSANVTAAKLRDFEQDDQQDIEVDEGNTAVIVCHLPESQPKAQVRYSVKQEWLE TSKGNYLIMPSGNLQIANATLDDEGPYKCAAYNPVTQEVKTSTSTDRLRIRRSTSEAAHI IYPPVSRSIMVTKGQRLVLECVASGIPTPQVTWAKDGQDLRFHNNTRFLLSNLLIDSAGE GDSGTYACHADNGIGSESAATVLYDVLVFEPPQVTVEVQQQEVMWGENVRFSCQARGKPT PSVVWLHNARPLATSPRHRLSARVLRVINVGPQDDGLYQCMAENGVGSSQAAARLVTLPT SNPSRSGKLPSNLRPLSPDKVLWEQVPVKPGATGSVLTLDCSGLTGQISVAEAPVILSQP RTVKADFYDLTWKPRHDGGSAVVEYIVKYRKIEDPPGEWTSSCISGSLHKLTLAKLQPAS LYEVEMSAKNCAGLGQPAMMTFRTGKGRRGPGGQNEPPKTPAVPSPRLSPPEAPDKPTIS TATETSAYVTWIPRGNRGFPIQSFRVEFKKLKGKGGGEWEEAVTNIPPQRLSVEITGLEK GMSYKFRVLAVNVIGASPPSVPSKAYTVLGGGRPNERPVDGPYITYNEAINETTIILKWT YTAVNNTPVYGFYIFYRPTDSDNDSDYKKDVVEGDRYWHSITDLQPETAYDIKMQSFNEG GESEFGNVVILETKARLNQRPSPSETSSQRPEHSGGPAPRPSDLPYLIVGVVLGALVFII VAFIPFCLWRAWAKEKEMSDLCFPAVASPVSSCQYTMVPLQGLALVGHCPLDPHLPPPHA VYPPIGLYTSNGKHHRPTHCLPGLHQEDVEYDMECGTLLAQTMSNGHVPVYHYSNSEPEH HGDREDHCFLPNDSTLQLLNTSEQPISSQVLTGNARFYNGDIIREKDINQVPSVCVDLPC SPSPLLSLEEENSKATTSAATTAESQDALPLQEVNTLLSETPPVEQGTSD NT seq 3213 nt NT seq  +upstreamnt  +downstreamnt atgtctggaacattagactggactccgtggatgaaaaagcgacgggcacgagtgctgagt gctctgagtgcagtgctgctgtgctgcatacagagcggcgccaccgtcagtggtaccagt gatgaagtaccagtgttcacagaggagcctctgtcggtggtccagaagctagggggaaga gtgattctgaggtgcagcacccaacccccctcagccaacatcagctggtggctaaacggg cgcgagctggttgccggggctgttgaggacctgggggtggtactggagcctggcacgctg ctcatcccagccctcaccaacctcaccctgggcaggtaccagtgtgtggccagcaccaac gcaggggccctggccagtgtgtctgccaacgtcaccgctgccaagttgcgtgactttgaa caagacgaccagcaggacattgaggtggatgaggggaacacggctgtgatcgtatgtcac ctccctgagagccagcctaaggcccaggtccgctacagtgtcaaacaggagtggctcgag acctccaaggggaactacctgatcatgccatcagggaacctgcagatagccaacgccact ctggacgacgaggggccttacaagtgtgctgcttacaaccctgtcacacaggaagtcaag acatccacctccactgaccgcctgcgcatacgccgttcaacatcagaggcggcccatatc atctaccccccagtgtctcgctccatcatggtcactaagggacagcgtctggttctggag tgtgtggccagtggcattcccaccccgcaggtcacatgggccaaggacggccaggacctg cgtttccataacaacacgcgctttctgctcagcaacctgctgattgactcggcgggcgag ggcgactctgggacgtatgcgtgtcacgctgacaacggcatcggatcggagagcgccgct acagtgctgtatgacgtgctggtgttcgagcctccccaggtgaccgtagaggtccagcaa caggaggtgatgtggggggagaacgtacgcttcagctgccaggccaggggtaaacccacc ccctctgtcgtatggctccacaacgcccgccccctggccacgtcgccacgccaccgcctg tctgcccgcgtgctgcgtgtcatcaacgtgggcccacaggacgatggcctgtaccagtgc atggctgagaacggcgtgggcagctcgcaggccgctgccagactggtcaccttgccaacc agtaacccgtcgcggtcagggaagctgccgtccaacctgcgtcccctgagcccagacaag gtgctgtgggagcaggtgccagtgaagcccggggccacgggtagcgtgctgaccctggac tgctctgggctaactgggcagatctctgtggcagaggcccctgtcattctcagccagccc aggaccgtcaaggccgacttctatgatctgacctggaaacctcgccacgatggaggttct gctgtggtggagtacatcgtcaagtacagaaagattgaggaccctccaggtgagtggacc agcagctgtatatctgggtctctccacaagctgaccctggccaagctgcagccagccagt ctgtacgaggtggagatgtctgctaagaactgtgctggcctgggacaaccggccatgatg accttcaggacaggcaaaggacgtaggggtccagggggacagaacgagccccctaaaaca cctgcagtaccatcacctcgcctctctcctcccgaggcccctgataagcccaccatctcc acggcgacagagacgtctgcgtacgtaacgtggatcccgcgcggtaaccgtggtttcccc atccagtcgttccgggtggagtttaagaagctgaaagggaagggagggggggagtgggag gaggccgtcactaacatccccccccaacgactgtctgtggagatcactggcctggagaaa ggcatgtcctataagttccgtgtgttggcggtgaatgtgattggcgccagcccccccagt gtcccctctaaggcctacacggtgttgggtggtggcaggcccaacgaacgccctgtagac ggaccatacatcacttataatgaagccatcaacgagaccaccatcatcctcaaatggacg tacactgccgtcaacaacacccctgtctacggtttctacatcttctaccggccgacagac agtgacaacgacagtgactataagaaggacgtggtggagggtgaccgctactggcactct atcactgacctgcagcctgagacggcctacgacatcaagatgcagagcttcaacgagggg ggagagagcgagtttggcaacgtggttattttagaaactaaagctcgtctgaaccagcgg ccctccccgtcggagacgtcgtcccagagaccagagcactccggggggcctgcgccccgc cccagcgacctcccctacctcatagtgggcgtggtcctgggggccctcgtgttcatcatt gtagccttcatccccttctgcctgtggagagcctgggccaaagagaaggaaatgtcagac ctgtgtttcccagctgtggcgtcccctgtctcctcctgccagtacaccatggtgcccctg cagggcctggcactggtcgggcattgccccctggacccccacttgcccccaccgcacgcc gtctacccacccatcggactgtacacctccaacgggaaacaccatcgacccacacactgc ctgccaggactacatcaggaggatgtggagtatgatatggagtgtggcacgctactagca cagaccatgtcaaacggacacgtcccagtctaccactactctaacagtgagcctgagcat catggagacagagaagatcactgctttctgcccaatgactccaccctccaactactcaac acctcagaacagccaatcagcagtcaggtcctgacggggaacgcccgtttttacaatggg gatatcataagggagaaggacatcaatcaagtcccctctgtctgtgtagacctaccctgc tctccctctcctctgctatcactggaggaggagaactccaaggcgacaacctcagcagct acaacggcagaatcccaagatgcacttccactccaggaagtgaacaccctcctgagtgaa acaccgccggtagaacaagggacgtcagattaa

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