Salmo trutta (river trout): 115195483
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Entry
115195483 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6-like
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115195483
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115195483
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115195483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF6_N
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
FAR1_N
zf-RING_4
zf-RING-like
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
115195483
NCBI-ProteinID:
XP_029611228
Ensembl:
ENSSTUG00000043621
LinkDB
All DBs
Position
6:complement(14033901..14040021)
Genome browser
AA seq
721 aa
AA seq
DB search
MVMDPPGGRDERRRQAERLRREEAYYHFINDLSEEEYRLMRDSNLLGTPGEVTAEELRQR
LDGAKERVSSQPRPEPRPQNTEAGEEEGSSGTAEPGAETSNGDSLLEWLNTFRRTGNATR
SGQSGNQTWRAVSRTNPNSGEFRFSLEININHEQPEPGEHSDTPDPSELSPVPPPSTASI
RTSPSTRPSPYTPARPSPYPSPRATLGRRAQTRRTRSTTTTPPLTPAPFTSPLPPPTALR
STTALHLSPAPFPITPPTLQDQSSPPQLQSPSGASSPEERQEEGVATLDCPRVAPQSGPQ
GASVGREPRSSRTRSRGRTRRAAAGGGTSSRSSRRRSRSPLQRNPAPNSATLSPNGGSGN
GGSNIHTAEPSNGTASVSMETGEAVSEPAVVAEPGPEAGEQEGEAHTAGAGGAGGVRRHP
TIMLDLQVRRIRPGENRDRDSIASRTRSRARAAENTVTFESDSGGFRRTISRSERAGIRT
YVSTIRIPLRRISETGLGEPSSTALRSILRQIMTGFGELSSLMETEADSETTGGTPGHQD
PAGPNANTTTQAYHSHGNESGTGAEGQAGGAEMETEGAAGAEEEGGQERLVGSDGGAGGV
PTPNEGRPTSRDTNNLVENGTLPILRLAHFFLLNDEEDEEHPRGLTKEQIDNLATRTYGQ
ASLEGEAGRSCSVCINEYAQGNKLRRLPCAHEFHIHCIDRWLSENNTCPICRQPILPVHQ
D
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggaccctcccggtgggcgagacgagcggcggcgtcaggcagagcgtcttcga
agggaggaggcgtactatcacttcatcaacgatctgagtgaggaagagtaccgcctcatg
agagacagcaacctgctgggcacacctggtgaagtgacagcggaggagctacggcagcgc
ctggacggggcaaaggagcgtgtgtcatctcagccccgacctgaaccccgcccacaaaac
acggaggccggagaagaggaggggagcagcggtactgctgagccgggagcagagacatct
aacggagactcactgctggagtggctgaacaccttccgacgcacagggaacgccacgcgg
agcggccagagcggcaaccagacgtggcgcgcggtcagccgcaccaaccccaacagtgga
gagttccgcttcagcctggagatcaacatcaaccatgagcagccagaaccaggggagcac
agtgacacccccgacccctccgagttgtcccctgtaccccctccatccacagcctccata
cgcacttccccctccactcgcccctccccctacacccctgcccggccctctccctatccc
tcacctcgagctaccctgggcaggagggctcaaacccgccgtacacgcagtactaccacc
acgcctcctctgactcctgcacccttcacctcacccctgcccccccctactgctctaagg
agtacaacagccctccacctctcccctgccccattccccatcaccccccctacccttcag
gatcaaagcagccctccacagctccagtccccaagcggagcttcctccccagaggagagg
caggaggagggggttgctaccctggactgcccccgtgtagcgccccagtctggcccccag
ggggcgtctgtggggcgtgagccacgcagcagcaggactcgatcccgcggccggacccgc
agggctgcagcaggaggtgggacttcctcccggtcgtctaggagacgtagccgctcccct
cttcagagaaacccagcccctaactctgctaccttatcccctaatggtgggagtggaaat
ggtggctctaatatccacactgccgagcccagcaatggaactgcttctgtctccatggag
accggtgaggccgtgtcagagccggctgtagtagcagagcctggtccagaggcaggggag
caggagggagaggcacacacggctggggcggggggtgctggaggggtacggcgccatccc
accatcatgctggatctgcaggtgcgtcgcatccgaccgggagagaaccgggaccgggac
agcatcgccagccgtacccgctcccgggcccgcgctgccgagaataccgtcacctttgag
agtgacagtggaggcttccggcgcaccatctcccgctcggagcgggccgggatccggacc
tacgtcagcaccatccggatccctctgaggaggatcagtgagacgggcctgggggaaccc
agctccaccgccctgcgctccatcctcagacagatcatgaccggcttcggggagctcagc
tccctcatggagacggaggctgactctgagaccaccgggggcacgccaggtcaccaggac
cctgcaggacccaacgcaaacaccaccacacaggcctaccatagccacggcaacgagagt
ggaactggggcggaaggtcaggcaggaggggcggagatggagaccgagggagcggcaggg
gccgaggaggaaggaggccaggagagattagtcgggagtgacggcggtgccggtggagtc
cccacccccaatgagggtcggccgacgagcagggacacaaacaacctcgtggaaaacggc
acactgcccatcctgcgtctggcccacttcttcctgctcaacgatgaggaggacgaggag
caccctcgtggcctgaccaaagagcagatcgataatctggccacgcgcacctacggccag
gccagcctggagggggaggcggggcgctcctgcagtgtctgcattaatgagtatgcccag
gggaataagctgcgccgcctgccctgcgcccacgagttccacatccactgcatcgaccgc
tggctctctgaaaacaacacctgccccatctgcaggcagcccatcctccctgtgcaccag
gactga
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