KEGG   Salmo trutta (river trout): 115195519
Entry
115195519         CDS       T08542                                 
Name
(RefSeq) interferon regulatory factor 4-like isoform X1
  KO
K04693  interferon regulatory factor 9
Organism
stru  Salmo trutta (river trout)
Pathway
stru04217  Necroptosis
stru04620  Toll-like receptor signaling pathway
stru04621  NOD-like receptor signaling pathway
stru04625  C-type lectin receptor signaling pathway
stru05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:stru00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    115195519
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    115195519
   04621 NOD-like receptor signaling pathway
    115195519
   04625 C-type lectin receptor signaling pathway
    115195519
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    115195519
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:stru03000]
    115195519
Transcription factors [BR:stru03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    115195519
SSDB
Motif
Pfam: IRF IRF-3
Other DBs
NCBI-GeneID: 115195519
NCBI-ProteinID: XP_029611287
Ensembl: ENSSTUG00000012480
LinkDB
Position
6:15071797..15076996
AA seq 431 aa
MASGKIRSTRRLRAWMVEQVSSGKYPGLVWDDDDKTMFRIPWKHAGKQDFRSEVDGAIFK
AWAVFKGKLSEGGHADPASWKTRLRVALNKSPEFREEPERSQLEISEPYKVYRLVPINEQ
ALGSVDMKVQARAGGRKRRSRDSDIEEEEVKVKQMKEVTTSLPITMEIEESVLTIQLDQV
DQPSVMVKSAGTVNEIQVNFTIETVPPPGARDSFHVLVKYMGEEVLKRGVMGSDVRIAYL
PSSPVPPTLMVAGFPRIPLPDPPSTLTSSIGPQFQALSTLLPFLEKGVILTSTRTGVYAK
RYCQGQVFWTGPHSATAGPQKMNHAVEPVRLFDREAFRMELDHFSSYGGDPPQCGFTLCF
SDKEDPSSKLIITQITLPWAQQQVKEAEDFRESMTYFRNITSESGEVTINLVSGSLLSEI
LGTSLPETLNI
NT seq 1296 nt   +upstreamnt  +downstreamnt
atggcatctgggaaaattcgctccacgcgcagactacgcgcttggatggtagaacaggtc
agcagtgggaagtaccctggcctggtatgggacgacgacgacaagaccatgttccgtata
ccatggaaacacgccgggaaacaagacttccgcagcgaagtggatggtgccatcttcaag
gcgtgggcagtgtttaaggggaagttgtctgaggggggtcatgcggaccctgcctcctgg
aagacgcggctgcgagttgctctcaataagagcccggagttcagagaggaacccgagagg
tcacagctggaaatctccgaaccatacaaagtctaccgcctcgtacccatcaacgaacaa
gcattggggagtgttgacatgaaggttcaagccagagcaggggggaggaagagaaggagc
cgcgattcagacatcgaggaagaggaggtgaaggtcaaacagatgaaagaggttaccacc
tccctaccaatcaccatggagattgaggaaagtgttcttacaatccagctagaccaggtt
gatcagccctcggtcatggtgaagagtgctgggacagtcaatgagatccaggtgaacttc
acaatcgagaccgtccctccccctggagcccgggactctttccatgtcttagtgaagtac
atgggagaggaggtgcttaaacgtggggtcatgggcagcgatgtccggatcgcctatctg
ccctcctcgcccgttccccccaccctgatggtggctgggttcccccgcatccccctgccc
gaccccccttccaccttaacctccagcatcgggccccagttccaggccctctccaccctg
ctgcccttcttggagaaaggggtgatcctgacctccacgagaacaggggtctatgctaag
cgctactgccagggccaggtgttctggacagggccacattcagccacggcgggaccccag
aagatgaaccatgctgtggagcccgtgcggctcttcgatagagaggctttcagaatggag
ctggaccacttcagcagctacggaggagaccctcctcagtgtggcttcaccttgtgtttc
agtgacaaagaggacccatccagcaaactcatcatcacacagataaccctaccctgggct
cagcagcaggtcaaggaagctgaagacttccgggagtcaatgacctacttccgcaacata
accagcgaatcaggagaggtcaccatcaacctggtatcaggttcattgctatccgagatc
cttgggacgtccctacctgaaaccctaaacatttaa

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