Salmo trutta (river trout): 115195612
Help
Entry
115195612 CDS
T08542
Symbol
dcaf11
Name
(RefSeq) DDB1- and CUL4-associated factor 11
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115195612 (dcaf11)
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115195612 (dcaf11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_LRRK2
Beta-prop_WDR19_1st
PROPPIN
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
115195612
NCBI-ProteinID:
XP_029611521
Ensembl:
ENSSTUG00000000909
UniProt:
A0A673VZQ2
LinkDB
All DBs
Position
6:complement(19939425..19956371)
Genome browser
AA seq
541 aa
AA seq
DB search
MGSQSSSGMSGGRGSSGNPDQSEAESNQSSSSNNSNSSRSRRSAEGQQGDRQSTAEEDVD
LAQVLAYLLRRGQVRLVHGSGATGLQLVQSYSDSDEDSDGAWEGRLGDRYNPPVDSQPDT
QELDRSEIRTRILLTTASSDLKGRQSFTHMLTEREQGRCRGSSFSHGECSRIRSHFLPNH
VTHKDTYQQKAFCGVYSDDGNMFLSACQDQNIRLYDTSSGRFNLKQTVKARDVGWSVLDV
CFTPDSYNVLYSSWSDYIHVCSVDGDSETHTALDLNPDERRFCVFSLAASTDGKEILGGA
NDGCLYVFDREQNRRTLKIDAHEDDVNAVAFADSSSQLLFSGSDDALCKVWDRRTLREDR
PQPVGQLSGHRDGITFIHSKGDARYLISNSKDQSIKLWDVRKFSPKEGLAASRLAVTQQN
WDYRWQQVPQRALKRHKLTGDTSVMTYRGHGVLHTLIRCRFSPEFTTGQRFIYTGCSTGK
IIVYDVLTGSVVTRLSEHDACVRDVSWHPYQDNIISSSWDGAVRVWEHRQTHPLDEERER
D
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgggctctcagtctagttctgggatgtccggcggtcggggctccagcggcaaccctgac
cagtctgaagcggaatccaaccagagcagcagcagtaataacagtaacagcagtagaagt
cgcagatcggctgaggggcagcagggtgacaggcagtcaacagcagaggaggacgtcgat
ttagctcaagtgctggcttacctattgaggaggggccaggtgaggctggtccatgggagt
ggagcaacaggcctgcagctcgtccagtcgtattcagattctgacgaggacagcgatggg
gcttgggaggggcgtctaggagaccgttacaaccctcccgtggactcccagccagacact
caggagttggaccggagtgaaatccggactcggatcctcctgaccacggcctcatctgac
ttgaaaggcaggcaaagcttcacccacatgctaacagagagggaacaaggccgatgtcga
ggctccagtttttctcacggagagtgtagtcgcattcgctcacatttcctgcccaatcat
gtgacacacaaggacacataccagcagaaagcgttctgtggtgtgtacagtgacgatggc
aacatgttcctctctgcctgccaagaccagaacatccgtttgtatgacaccagtagcggg
cgctttaacctgaagcagactgtgaaggccagggacgtgggctggagcgtgctggacgta
tgcttcacccccgactcctacaacgtgctctactccagctggtctgattacattcatgtc
tgcagtgtagatggagacagtgaaacccataccgccctggacctcaacccagacgagagg
aggttctgtgtcttctctctggctgcctccacagacggaaaagagatccttggaggagca
aatgatggctgcctctacgtctttgatcgtgaacagaataggagaacccttaagattgat
gctcacgaggatgacgtgaatgcggtggcttttgctgacagctcgtcccagctgctgttc
tcaggcagcgacgacgcgctctgcaaggtgtgggacaggcggacgctgcgggaggacaga
ccccagcccgtgggccagctgtctggacacagagatggcatcaccttcatacacagcaag
ggcgatgcacgttatctgatcagtaactccaaggaccagtccatcaagctgtgggacgtg
aggaagttctcccccaaggagggcctggcggcctcgcggctggccgttacccagcagaac
tgggactaccgctggcagcaggtgccccagagagccctgaagagacacaagctgaccggc
gacacctcggtgatgacctacaggggtcacggtgttctgcacaccctcatacgctgccgt
ttctccccggagttcaccaccggacagaggttcatctacaccggctgctccactgggaag
atcattgtctatgacgtgctgacgggcagcgtggtgaccagactctctgagcatgacgcg
tgtgtgagggatgtcagctggcatccctaccaggacaacatcatcagcagctcctgggac
ggagcagtgcgtgtttgggagcacaggcagacccacccactggatgaggagagggagagg
gactga
DBGET
integrated database retrieval system
